Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 AP003400.5-201ENST00000624827 617 ntBASIC4.08□□□□□ -1.76
CCM2LQ9NUG4 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
CCM2LQ9NUG4 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CCM2LQ9NUG4 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CCM2LQ9NUG4 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCM2LQ9NUG4 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCM2LQ9NUG4 AC121333.1-201ENST00000567488 2709 ntBASIC4.08□□□□□ -1.76
CCM2LQ9NUG4 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CCM2LQ9NUG4 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.07□□□□□ -1.76
CCM2LQ9NUG4 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CCM2LQ9NUG4 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.07□□□□□ -1.76
CCM2LQ9NUG4 SNORA71.2-201ENST00000364941 134 ntBASIC4.07□□□□□ -1.76
CCM2LQ9NUG4 Y_RNA.373-201ENST00000365600 103 ntBASIC4.07□□□□□ -1.76
CCM2LQ9NUG4 SNORA3C-201ENST00000408792 125 ntBASIC4.07□□□□□ -1.76
CCM2LQ9NUG4 POLHP1-201ENST00000411806 470 ntBASIC4.07□□□□□ -1.76
CCM2LQ9NUG4 MTND3P8-201ENST00000412909 339 ntBASIC4.07□□□□□ -1.76
CCM2LQ9NUG4 USP9YP20-201ENST00000419224 558 ntBASIC4.07□□□□□ -1.76
CCM2LQ9NUG4 PDCL2P1-201ENST00000419302 352 ntBASIC4.07□□□□□ -1.76
CCM2LQ9NUG4 NCOR1P3-201ENST00000420479 303 ntBASIC4.07□□□□□ -1.76
CCM2LQ9NUG4 RPS12P10-201ENST00000427031 377 ntBASIC4.07□□□□□ -1.76
CCM2LQ9NUG4 AL451062.2-201ENST00000427515 271 ntBASIC4.07□□□□□ -1.76
CCM2LQ9NUG4 HSPD1P21-201ENST00000436541 245 ntBASIC4.07□□□□□ -1.76
CCM2LQ9NUG4 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.07□□□□□ -1.76
CCM2LQ9NUG4 AC012181.1-201ENST00000479895 423 ntBASIC4.07□□□□□ -1.76
CCM2LQ9NUG4 RPS15AP34-201ENST00000487776 387 ntBASIC4.07□□□□□ -1.76
CCM2LQ9NUG4 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.07□□□□□ -1.76
CCM2LQ9NUG4 AP001086.1-201ENST00000494882 321 ntBASIC4.07□□□□□ -1.76
CCM2LQ9NUG4 RNU6-189P-201ENST00000516120 101 ntBASIC4.07□□□□□ -1.76
CCM2LQ9NUG4 RNU6-1038P-201ENST00000516516 104 ntBASIC4.07□□□□□ -1.76
CCM2LQ9NUG4 RNU6-143P-201ENST00000516942 93 ntBASIC4.07□□□□□ -1.76
CCM2LQ9NUG4 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC4.07□□□□□ -1.76
CCM2LQ9NUG4 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC4.07□□□□□ -1.76
CCM2LQ9NUG4 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC4.07□□□□□ -1.76
CCM2LQ9NUG4 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC4.07□□□□□ -1.76
CCM2LQ9NUG4 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC4.07□□□□□ -1.76
CCM2LQ9NUG4 AP001781.1-201ENST00000530977 207 ntBASIC4.07□□□□□ -1.76
CCM2LQ9NUG4 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.07□□□□□ -1.76
CCM2LQ9NUG4 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.07□□□□□ -1.76
CCM2LQ9NUG4 OR11H5P-201ENST00000554039 926 ntBASIC4.07□□□□□ -1.76
CCM2LQ9NUG4 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC4.07□□□□□ -1.76
CCM2LQ9NUG4 AC092747.3-201ENST00000603769 301 ntBASIC4.07□□□□□ -1.76
CCM2LQ9NUG4 AC098826.3-201ENST00000603823 466 ntBASIC4.07□□□□□ -1.76
CCM2LQ9NUG4 AC106900.2-201ENST00000604994 317 ntBASIC4.07□□□□□ -1.76
CCM2LQ9NUG4 AL592436.1-201ENST00000605135 558 ntBASIC4.07□□□□□ -1.76
CCM2LQ9NUG4 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.07□□□□□ -1.76
CCM2LQ9NUG4 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.07□□□□□ -1.76
CCM2LQ9NUG4 AL445363.3-201ENST00000623080 671 ntBASIC4.07□□□□□ -1.76
CCM2LQ9NUG4 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.07□□□□□ -1.76
CCM2LQ9NUG4 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
CCM2LQ9NUG4 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
CCM2LQ9NUG4 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.07□□□□□ -1.76
CCM2LQ9NUG4 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCM2LQ9NUG4 MTND4P29-201ENST00000503122 1372 ntBASIC4.06□□□□□ -1.76
CCM2LQ9NUG4 RAD17P1-201ENST00000418130 2042 ntBASIC4.06□□□□□ -1.76
CCM2LQ9NUG4 SNORD81.2-201ENST00000365153 76 ntBASIC4.06□□□□□ -1.76
CCM2LQ9NUG4 RNU6-715P-201ENST00000365204 103 ntBASIC4.06□□□□□ -1.76
CCM2LQ9NUG4 RNU6-434P-201ENST00000384376 107 ntBASIC4.06□□□□□ -1.76
CCM2LQ9NUG4 RNU6-393P-201ENST00000384475 107 ntBASIC4.06□□□□□ -1.76
CCM2LQ9NUG4 Y_RNA.534-201ENST00000384599 112 ntBASIC4.06□□□□□ -1.76
CCM2LQ9NUG4 AL139039.1-201ENST00000401900 692 ntBASIC4.06□□□□□ -1.76
CCM2LQ9NUG4 AL445189.1-201ENST00000405722 338 ntBASIC4.06□□□□□ -1.76
CCM2LQ9NUG4 RNA5SP129-201ENST00000410276 118 ntBASIC4.06□□□□□ -1.76
CCM2LQ9NUG4 RNU2-33P-201ENST00000410344 192 ntBASIC4.06□□□□□ -1.76
CCM2LQ9NUG4 RNU6-1148P-201ENST00000410992 104 ntBASIC4.06□□□□□ -1.76
CCM2LQ9NUG4 OFD1P1Y-201ENST00000411756 1225 ntBASIC4.06□□□□□ -1.76
CCM2LQ9NUG4 RPL7P10-201ENST00000417407 739 ntBASIC4.06□□□□□ -1.76
CCM2LQ9NUG4 BX842559.1-201ENST00000419615 532 ntBASIC4.06□□□□□ -1.76
CCM2LQ9NUG4 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.06□□□□□ -1.76
CCM2LQ9NUG4 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.06□□□□□ -1.76
CCM2LQ9NUG4 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC4.06□□□□□ -1.76
CCM2LQ9NUG4 NUTF2P3-201ENST00000448540 384 ntBASIC4.06□□□□□ -1.76
CCM2LQ9NUG4 RPL31P60-201ENST00000478450 367 ntBASIC4.06□□□□□ -1.76
CCM2LQ9NUG4 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC4.06□□□□□ -1.76
CCM2LQ9NUG4 AL160314.1-201ENST00000490836 438 ntBASIC4.06□□□□□ -1.76
CCM2LQ9NUG4 AC020593.1-201ENST00000507399 299 ntBASIC4.06□□□□□ -1.76
CCM2LQ9NUG4 HIGD1AP13-201ENST00000509878 289 ntBASIC4.06□□□□□ -1.76
CCM2LQ9NUG4 FTH1P9-201ENST00000513251 355 ntBASIC4.06□□□□□ -1.76
CCM2LQ9NUG4 RNA5SP471-201ENST00000516971 106 ntBASIC4.06□□□□□ -1.76
CCM2LQ9NUG4 RN7SKP256-201ENST00000517201 314 ntBASIC4.06□□□□□ -1.76
CCM2LQ9NUG4 IL7-206ENST00000520269 456 ntTSL 3 BASIC4.06□□□□□ -1.76
CCM2LQ9NUG4 IGKV2D-19-201ENST00000523346 262 ntBASIC4.06□□□□□ -1.76
CCM2LQ9NUG4 AP001804.3-201ENST00000525146 880 ntBASIC4.06□□□□□ -1.76
CCM2LQ9NUG4 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCM2LQ9NUG4 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.06□□□□□ -1.76
CCM2LQ9NUG4 BNIP3P25-201ENST00000596023 559 ntBASIC4.06□□□□□ -1.76
CCM2LQ9NUG4 AL022345.1-201ENST00000607292 135 ntBASIC4.06□□□□□ -1.76
CCM2LQ9NUG4 AC114781.5-201ENST00000615297 108 ntBASIC4.06□□□□□ -1.76
CCM2LQ9NUG4 AP005019.3-201ENST00000620418 560 ntBASIC4.06□□□□□ -1.76
CCM2LQ9NUG4 MIR7702-201ENST00000621931 59 ntBASIC4.06□□□□□ -1.76
CCM2LQ9NUG4 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC4.06□□□□□ -1.76
CCM2LQ9NUG4 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
CCM2LQ9NUG4 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCM2LQ9NUG4 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
CCM2LQ9NUG4 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.05□□□□□ -1.76
CCM2LQ9NUG4 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCM2LQ9NUG4 HSPA8P4-201ENST00000511877 1920 ntBASIC4.05□□□□□ -1.76
CCM2LQ9NUG4 Y_RNA.61-201ENST00000362835 102 ntBASIC4.05□□□□□ -1.76
CCM2LQ9NUG4 Y_RNA.399-201ENST00000383955 105 ntBASIC4.05□□□□□ -1.76
CCM2LQ9NUG4 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CCM2LQ9NUG4 SNORD70.1-201ENST00000391007 85 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms