Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 RN7SKP57-201ENST00000517248 293 ntBASIC1.05□□□□□ -2.24
CDC42SE1Q9NRR8 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC1.05□□□□□ -2.24
CDC42SE1Q9NRR8 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.05□□□□□ -2.24
CDC42SE1Q9NRR8 AC026616.1-201ENST00000523157 525 ntBASIC1.05□□□□□ -2.24
CDC42SE1Q9NRR8 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC1.05□□□□□ -2.24
CDC42SE1Q9NRR8 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC1.05□□□□□ -2.24
CDC42SE1Q9NRR8 ARL6IP1P1-201ENST00000545836 610 ntBASIC1.05□□□□□ -2.24
CDC42SE1Q9NRR8 AL354943.1-201ENST00000572103 781 ntBASIC1.05□□□□□ -2.24
CDC42SE1Q9NRR8 AL353997.4-201ENST00000586196 166 ntBASIC1.05□□□□□ -2.24
CDC42SE1Q9NRR8 UBE2L4-201ENST00000587688 464 ntBASIC1.05□□□□□ -2.24
CDC42SE1Q9NRR8 AL451007.1-201ENST00000595491 289 ntBASIC1.05□□□□□ -2.24
CDC42SE1Q9NRR8 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC1.05□□□□□ -2.24
CDC42SE1Q9NRR8 AL606834.2-201ENST00000602954 668 ntBASIC1.05□□□□□ -2.24
CDC42SE1Q9NRR8 AC007938.3-201ENST00000604965 623 ntBASIC1.05□□□□□ -2.24
CDC42SE1Q9NRR8 AF129408.1-201ENST00000608767 431 ntBASIC1.05□□□□□ -2.24
CDC42SE1Q9NRR8 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.05□□□□□ -2.24
CDC42SE1Q9NRR8 TUG1_2.1-201ENST00000614234 87 ntBASIC1.05□□□□□ -2.24
CDC42SE1Q9NRR8 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.05□□□□□ -2.24
CDC42SE1Q9NRR8 AC090510.2-201ENST00000617465 629 ntBASIC1.05□□□□□ -2.24
CDC42SE1Q9NRR8 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC1.05□□□□□ -2.24
CDC42SE1Q9NRR8 AL158801.5-201ENST00000623123 465 ntBASIC1.05□□□□□ -2.24
CDC42SE1Q9NRR8 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.05□□□□□ -2.24
CDC42SE1Q9NRR8 AC019226.1-201ENST00000625666 515 ntBASIC1.05□□□□□ -2.24
CDC42SE1Q9NRR8 AC107982.1-201ENST00000507171 1300 ntBASIC1.05□□□□□ -2.24
CDC42SE1Q9NRR8 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.05□□□□□ -2.24
CDC42SE1Q9NRR8 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.04□□□□□ -2.24
CDC42SE1Q9NRR8 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
CDC42SE1Q9NRR8 U3.13-201ENST00000364804 214 ntBASIC1.04□□□□□ -2.24
CDC42SE1Q9NRR8 SNORA48.3-201ENST00000391081 134 ntBASIC1.04□□□□□ -2.24
CDC42SE1Q9NRR8 SNORA48.5-201ENST00000391143 135 ntBASIC1.04□□□□□ -2.24
CDC42SE1Q9NRR8 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC1.04□□□□□ -2.24
CDC42SE1Q9NRR8 BTF3P7-201ENST00000407097 488 ntBASIC1.04□□□□□ -2.24
CDC42SE1Q9NRR8 RN7SKP51-201ENST00000410781 304 ntBASIC1.04□□□□□ -2.24
CDC42SE1Q9NRR8 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC1.04□□□□□ -2.24
CDC42SE1Q9NRR8 RPL36AP36-201ENST00000418616 301 ntBASIC1.04□□□□□ -2.24
CDC42SE1Q9NRR8 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.04□□□□□ -2.24
CDC42SE1Q9NRR8 DPRXP1-201ENST00000426312 460 ntBASIC1.04□□□□□ -2.24
CDC42SE1Q9NRR8 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC1.04□□□□□ -2.24
CDC42SE1Q9NRR8 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.04□□□□□ -2.24
CDC42SE1Q9NRR8 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC1.04□□□□□ -2.24
CDC42SE1Q9NRR8 NANOGP2-201ENST00000435391 727 ntBASIC1.04□□□□□ -2.24
CDC42SE1Q9NRR8 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC1.04□□□□□ -2.24
CDC42SE1Q9NRR8 ARPC3P5-201ENST00000448802 534 ntBASIC1.04□□□□□ -2.24
CDC42SE1Q9NRR8 MTND1P9-201ENST00000453775 944 ntBASIC1.04□□□□□ -2.24
CDC42SE1Q9NRR8 AC027575.1-201ENST00000481064 460 ntBASIC1.04□□□□□ -2.24
CDC42SE1Q9NRR8 RN7SL741P-201ENST00000482473 289 ntBASIC1.04□□□□□ -2.24
CDC42SE1Q9NRR8 AC018437.1-201ENST00000492214 406 ntBASIC1.04□□□□□ -2.24
CDC42SE1Q9NRR8 RN7SL612P-201ENST00000497704 295 ntBASIC1.04□□□□□ -2.24
CDC42SE1Q9NRR8 AC026414.1-201ENST00000504046 698 ntBASIC1.04□□□□□ -2.24
CDC42SE1Q9NRR8 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC1.04□□□□□ -2.24
CDC42SE1Q9NRR8 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC1.04□□□□□ -2.24
CDC42SE1Q9NRR8 SCARNA16.3-201ENST00000516595 184 ntBASIC1.04□□□□□ -2.24
CDC42SE1Q9NRR8 RNA5SP165-201ENST00000517142 115 ntBASIC1.04□□□□□ -2.24
CDC42SE1Q9NRR8 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC1.04□□□□□ -2.24
CDC42SE1Q9NRR8 AC243972.3-201ENST00000539655 198 ntBASIC1.04□□□□□ -2.24
CDC42SE1Q9NRR8 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.04□□□□□ -2.24
CDC42SE1Q9NRR8 MIR5186-201ENST00000577504 120 ntBASIC1.04□□□□□ -2.24
CDC42SE1Q9NRR8 AL583856.2-201ENST00000606298 543 ntBASIC1.04□□□□□ -2.24
CDC42SE1Q9NRR8 DUSP12P1-201ENST00000612874 516 ntBASIC1.04□□□□□ -2.24
CDC42SE1Q9NRR8 AC009268.2-201ENST00000621925 457 ntBASIC1.04□□□□□ -2.24
CDC42SE1Q9NRR8 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC1.04□□□□□ -2.24
CDC42SE1Q9NRR8 Z99496.1-201ENST00000469424 1477 ntBASIC1.04□□□□□ -2.24
CDC42SE1Q9NRR8 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.04□□□□□ -2.24
CDC42SE1Q9NRR8 MTND5P29-201ENST00000458676 1807 ntBASIC1.03□□□□□ -2.24
CDC42SE1Q9NRR8 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
CDC42SE1Q9NRR8 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.03□□□□□ -2.24
CDC42SE1Q9NRR8 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC1.03□□□□□ -2.24
CDC42SE1Q9NRR8 Y_RNA.245-201ENST00000364493 95 ntBASIC1.03□□□□□ -2.24
CDC42SE1Q9NRR8 RNA5SP363-201ENST00000365072 115 ntBASIC1.03□□□□□ -2.24
CDC42SE1Q9NRR8 SNORA8-201ENST00000384574 139 ntBASIC1.03□□□□□ -2.24
CDC42SE1Q9NRR8 RNU6-114P-201ENST00000384704 105 ntBASIC1.03□□□□□ -2.24
CDC42SE1Q9NRR8 MIR518A2-201ENST00000384966 87 ntBASIC1.03□□□□□ -2.24
CDC42SE1Q9NRR8 OR6C69P-201ENST00000394268 893 ntBASIC1.03□□□□□ -2.24
CDC42SE1Q9NRR8 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
CDC42SE1Q9NRR8 MIR934-201ENST00000401241 83 ntBASIC1.03□□□□□ -2.24
CDC42SE1Q9NRR8 AL356421.1-201ENST00000403255 413 ntBASIC1.03□□□□□ -2.24
CDC42SE1Q9NRR8 AL079342.2-201ENST00000403367 482 ntBASIC1.03□□□□□ -2.24
CDC42SE1Q9NRR8 TXNP7-201ENST00000406296 293 ntBASIC1.03□□□□□ -2.24
CDC42SE1Q9NRR8 RNU4-47P-201ENST00000410876 114 ntBASIC1.03□□□□□ -2.24
CDC42SE1Q9NRR8 HSFY4P-201ENST00000415994 1181 ntBASIC1.03□□□□□ -2.24
CDC42SE1Q9NRR8 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
CDC42SE1Q9NRR8 MTCYBP38-201ENST00000417160 1123 ntBASIC1.03□□□□□ -2.24
CDC42SE1Q9NRR8 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.03□□□□□ -2.24
CDC42SE1Q9NRR8 USP9YP9-201ENST00000429406 715 ntBASIC1.03□□□□□ -2.24
CDC42SE1Q9NRR8 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC1.03□□□□□ -2.24
CDC42SE1Q9NRR8 ATP6V0E1P2-201ENST00000441771 245 ntBASIC1.03□□□□□ -2.24
CDC42SE1Q9NRR8 AC009238.1-201ENST00000442165 424 ntBASIC1.03□□□□□ -2.24
CDC42SE1Q9NRR8 MTATP6P30-201ENST00000443540 664 ntBASIC1.03□□□□□ -2.24
CDC42SE1Q9NRR8 AL591719.1-201ENST00000444669 744 ntBASIC1.03□□□□□ -2.24
CDC42SE1Q9NRR8 AC009237.6-201ENST00000446969 424 ntBASIC1.03□□□□□ -2.24
CDC42SE1Q9NRR8 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC1.03□□□□□ -2.24
CDC42SE1Q9NRR8 AC020550.1-201ENST00000447385 163 ntBASIC1.03□□□□□ -2.24
CDC42SE1Q9NRR8 FABP5P15-201ENST00000453566 214 ntBASIC1.03□□□□□ -2.24
CDC42SE1Q9NRR8 BX322784.1-201ENST00000455793 1077 ntBASIC1.03□□□□□ -2.24
CDC42SE1Q9NRR8 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC1.03□□□□□ -2.24
CDC42SE1Q9NRR8 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.03□□□□□ -2.24
CDC42SE1Q9NRR8 AC117503.1-201ENST00000472241 394 ntBASIC1.03□□□□□ -2.24
CDC42SE1Q9NRR8 AC021382.1-201ENST00000483523 359 ntBASIC1.03□□□□□ -2.24
CDC42SE1Q9NRR8 HMGB1P35-201ENST00000503360 598 ntBASIC1.03□□□□□ -2.24
CDC42SE1Q9NRR8 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms