Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC7.05□□□□□ -1.28
RNF39Q9H2S5 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC7.05□□□□□ -1.28
RNF39Q9H2S5 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
RNF39Q9H2S5 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
RNF39Q9H2S5 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RNF39Q9H2S5 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
RNF39Q9H2S5 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RNF39Q9H2S5 MIR181A2-201ENST00000384863 110 ntBASIC7.05□□□□□ -1.28
RNF39Q9H2S5 EI24P2-201ENST00000397776 1076 ntBASIC7.05□□□□□ -1.28
RNF39Q9H2S5 RNA5SP511-201ENST00000410487 115 ntBASIC7.05□□□□□ -1.28
RNF39Q9H2S5 RPL21P50-201ENST00000417698 477 ntBASIC7.05□□□□□ -1.28
RNF39Q9H2S5 AC099782.1-201ENST00000425889 474 ntBASIC7.05□□□□□ -1.28
RNF39Q9H2S5 AL035398.1-201ENST00000430869 322 ntBASIC7.05□□□□□ -1.28
RNF39Q9H2S5 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC7.05□□□□□ -1.28
RNF39Q9H2S5 AC107934.2-201ENST00000518653 310 ntBASIC7.05□□□□□ -1.28
RNF39Q9H2S5 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC7.05□□□□□ -1.28
RNF39Q9H2S5 AC084121.1-201ENST00000533882 835 ntBASIC7.05□□□□□ -1.28
RNF39Q9H2S5 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC7.05□□□□□ -1.28
RNF39Q9H2S5 MIR6085-201ENST00000618314 110 ntBASIC7.05□□□□□ -1.28
RNF39Q9H2S5 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC7.05□□□□□ -1.28
RNF39Q9H2S5 U6.111-201ENST00000636093 83 ntBASIC7.05□□□□□ -1.28
RNF39Q9H2S5 AL136531.3-201ENST00000624378 3658 ntBASIC7.05□□□□□ -1.28
RNF39Q9H2S5 SMG1P5-202ENST00000529428 4219 ntBASIC7.05□□□□□ -1.28
RNF39Q9H2S5 SMG1P2-201ENST00000566127 4221 ntBASIC7.05□□□□□ -1.28
RNF39Q9H2S5 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
RNF39Q9H2S5 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
RNF39Q9H2S5 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC7.05□□□□□ -1.28
RNF39Q9H2S5 AC024651.2-201ENST00000562480 2098 ntBASIC7.05□□□□□ -1.28
RNF39Q9H2S5 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
RNF39Q9H2S5 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
RNF39Q9H2S5 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
RNF39Q9H2S5 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RNF39Q9H2S5 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
RNF39Q9H2S5 SPATA31C1-201ENST00000420021 3895 ntBASIC7.04□□□□□ -1.28
RNF39Q9H2S5 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC7.04□□□□□ -1.28
RNF39Q9H2S5 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
RNF39Q9H2S5 AP003119.3-201ENST00000566747 4192 ntBASIC7.04□□□□□ -1.28
RNF39Q9H2S5 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RNF39Q9H2S5 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
RNF39Q9H2S5 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
RNF39Q9H2S5 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC7.04□□□□□ -1.28
RNF39Q9H2S5 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
RNF39Q9H2S5 RNU1-100P-201ENST00000365255 165 ntBASIC7.04□□□□□ -1.28
RNF39Q9H2S5 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
RNF39Q9H2S5 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
RNF39Q9H2S5 RN7SKP281-201ENST00000410472 352 ntBASIC7.04□□□□□ -1.28
RNF39Q9H2S5 RNU2-49P-201ENST00000410666 184 ntBASIC7.04□□□□□ -1.28
RNF39Q9H2S5 AC099548.1-201ENST00000421443 426 ntBASIC7.04□□□□□ -1.28
RNF39Q9H2S5 AC108479.1-201ENST00000431142 427 ntBASIC7.04□□□□□ -1.28
RNF39Q9H2S5 POU5F1P5-201ENST00000445059 658 ntBASIC7.04□□□□□ -1.28
RNF39Q9H2S5 AP001486.1-201ENST00000463339 476 ntBASIC7.04□□□□□ -1.28
RNF39Q9H2S5 AC108145.1-201ENST00000503770 153 ntBASIC7.04□□□□□ -1.28
RNF39Q9H2S5 ZNF519P4-201ENST00000514008 125 ntBASIC7.04□□□□□ -1.28
RNF39Q9H2S5 RNA5SP206-201ENST00000516703 121 ntBASIC7.04□□□□□ -1.28
RNF39Q9H2S5 RNU6-703P-201ENST00000516946 107 ntBASIC7.04□□□□□ -1.28
RNF39Q9H2S5 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC7.04□□□□□ -1.28
RNF39Q9H2S5 TPRX1P1-201ENST00000557620 319 ntBASIC7.04□□□□□ -1.28
RNF39Q9H2S5 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
RNF39Q9H2S5 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC7.04□□□□□ -1.28
RNF39Q9H2S5 AC005336.3-201ENST00000623833 2679 ntBASIC7.04□□□□□ -1.28
RNF39Q9H2S5 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RNF39Q9H2S5 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
RNF39Q9H2S5 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RNF39Q9H2S5 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RNF39Q9H2S5 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC7.04□□□□□ -1.28
RNF39Q9H2S5 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RNF39Q9H2S5 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RNF39Q9H2S5 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
RNF39Q9H2S5 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
RNF39Q9H2S5 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC7.04□□□□□ -1.28
RNF39Q9H2S5 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RNF39Q9H2S5 GTF2IP4-201ENST00000453092 2054 ntBASIC7.04□□□□□ -1.28
RNF39Q9H2S5 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
RNF39Q9H2S5 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
RNF39Q9H2S5 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC7.03□□□□□ -1.28
RNF39Q9H2S5 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC7.03□□□□□ -1.28
RNF39Q9H2S5 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
RNF39Q9H2S5 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
RNF39Q9H2S5 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
RNF39Q9H2S5 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC7.03□□□□□ -1.28
RNF39Q9H2S5 PLXNC1-205ENST00000547057 2455 ntTSL 2 BASIC7.03□□□□□ -1.28
RNF39Q9H2S5 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
RNF39Q9H2S5 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
RNF39Q9H2S5 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
RNF39Q9H2S5 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
RNF39Q9H2S5 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
RNF39Q9H2S5 RNU1-64P-201ENST00000365443 163 ntBASIC7.03□□□□□ -1.28
RNF39Q9H2S5 MIR188-201ENST00000385034 86 ntBASIC7.03□□□□□ -1.28
RNF39Q9H2S5 MIR137-201ENST00000385223 102 ntBASIC7.03□□□□□ -1.28
RNF39Q9H2S5 SNRPEP9-201ENST00000436794 238 ntBASIC7.03□□□□□ -1.28
RNF39Q9H2S5 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC7.03□□□□□ -1.28
RNF39Q9H2S5 RN7SKP282-201ENST00000516824 299 ntBASIC7.03□□□□□ -1.28
RNF39Q9H2S5 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
RNF39Q9H2S5 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC7.03□□□□□ -1.28
RNF39Q9H2S5 SMIM12P1-201ENST00000603004 274 ntBASIC7.03□□□□□ -1.28
RNF39Q9H2S5 HSPE1P7-201ENST00000604681 321 ntBASIC7.03□□□□□ -1.28
RNF39Q9H2S5 JPX_2.1-201ENST00000614161 69 ntBASIC7.03□□□□□ -1.28
RNF39Q9H2S5 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC7.03□□□□□ -1.28
RNF39Q9H2S5 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC7.03□□□□□ -1.28
RNF39Q9H2S5 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC7.03□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms