Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RNF38Q9H0F5 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
RNF38Q9H0F5 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RNF38Q9H0F5 RN7SKP227-201ENST00000364445 330 ntBASIC4.53□□□□□ -1.68
RNF38Q9H0F5 SNORA63.7-201ENST00000365579 123 ntBASIC4.53□□□□□ -1.68
RNF38Q9H0F5 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RNF38Q9H0F5 MIR450B-201ENST00000401182 78 ntBASIC4.53□□□□□ -1.68
RNF38Q9H0F5 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC4.53□□□□□ -1.68
RNF38Q9H0F5 PDSS1P1-201ENST00000422953 1114 ntBASIC4.53□□□□□ -1.68
RNF38Q9H0F5 AC018865.2-201ENST00000423631 129 ntBASIC4.53□□□□□ -1.68
RNF38Q9H0F5 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.53□□□□□ -1.68
RNF38Q9H0F5 RPL7P28-201ENST00000437739 740 ntBASIC4.53□□□□□ -1.68
RNF38Q9H0F5 Z98949.2-201ENST00000440996 144 ntBASIC4.53□□□□□ -1.68
RNF38Q9H0F5 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC4.53□□□□□ -1.68
RNF38Q9H0F5 RPS17P13-201ENST00000448974 407 ntBASIC4.53□□□□□ -1.68
RNF38Q9H0F5 RPS15AP27-201ENST00000449183 343 ntBASIC4.53□□□□□ -1.68
RNF38Q9H0F5 RPL21P8-201ENST00000465083 535 ntBASIC4.53□□□□□ -1.68
RNF38Q9H0F5 RPL35AP15-201ENST00000468042 339 ntBASIC4.53□□□□□ -1.68
RNF38Q9H0F5 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.53□□□□□ -1.68
RNF38Q9H0F5 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC4.53□□□□□ -1.68
RNF38Q9H0F5 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.53□□□□□ -1.68
RNF38Q9H0F5 RBBP4P6-201ENST00000508098 202 ntBASIC4.53□□□□□ -1.68
RNF38Q9H0F5 HIGD1AP13-201ENST00000509878 289 ntBASIC4.53□□□□□ -1.68
RNF38Q9H0F5 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC4.53□□□□□ -1.68
RNF38Q9H0F5 AC008958.1-201ENST00000511047 682 ntBASIC4.53□□□□□ -1.68
RNF38Q9H0F5 MEPE-206ENST00000511670 550 ntTSL 4 BASIC4.53□□□□□ -1.68
RNF38Q9H0F5 SNORA25.10-201ENST00000515926 124 ntBASIC4.53□□□□□ -1.68
RNF38Q9H0F5 RNA5SP49-201ENST00000516450 115 ntBASIC4.53□□□□□ -1.68
RNF38Q9H0F5 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.53□□□□□ -1.68
RNF38Q9H0F5 AC103783.1-201ENST00000520506 373 ntBASIC4.53□□□□□ -1.68
RNF38Q9H0F5 AP002404.1-201ENST00000532005 451 ntBASIC4.53□□□□□ -1.68
RNF38Q9H0F5 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.53□□□□□ -1.68
RNF38Q9H0F5 MIR4293-201ENST00000584305 78 ntBASIC4.53□□□□□ -1.68
RNF38Q9H0F5 AC006254.3-201ENST00000603353 884 ntBASIC4.53□□□□□ -1.68
RNF38Q9H0F5 AC010378.1-201ENST00000619270 362 ntBASIC4.53□□□□□ -1.68
RNF38Q9H0F5 AC067931.1-201ENST00000624190 671 ntBASIC4.53□□□□□ -1.68
RNF38Q9H0F5 AC055839.1-201ENST00000634467 498 ntBASIC4.53□□□□□ -1.68
RNF38Q9H0F5 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RNF38Q9H0F5 MAPK10-303ENST00000641324 3959 ntBASIC4.53□□□□□ -1.68
RNF38Q9H0F5 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
RNF38Q9H0F5 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.53□□□□□ -1.68
RNF38Q9H0F5 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.69
RNF38Q9H0F5 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.53□□□□□ -1.69
RNF38Q9H0F5 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
RNF38Q9H0F5 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
RNF38Q9H0F5 Y_RNA.135-201ENST00000363439 95 ntBASIC4.52□□□□□ -1.69
RNF38Q9H0F5 Y_RNA.176-201ENST00000363815 109 ntBASIC4.52□□□□□ -1.69
RNF38Q9H0F5 RNU6-432P-201ENST00000384196 109 ntBASIC4.52□□□□□ -1.69
RNF38Q9H0F5 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
RNF38Q9H0F5 MIR1193-201ENST00000408109 78 ntBASIC4.52□□□□□ -1.69
RNF38Q9H0F5 AL157831.1-201ENST00000426134 473 ntBASIC4.52□□□□□ -1.69
RNF38Q9H0F5 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.52□□□□□ -1.69
RNF38Q9H0F5 AC069285.2-201ENST00000440210 275 ntBASIC4.52□□□□□ -1.69
RNF38Q9H0F5 AC005094.1-201ENST00000440420 368 ntBASIC4.52□□□□□ -1.69
RNF38Q9H0F5 AC010655.1-201ENST00000449336 292 ntBASIC4.52□□□□□ -1.69
RNF38Q9H0F5 CECR9-201ENST00000453421 199 ntBASIC4.52□□□□□ -1.69
RNF38Q9H0F5 AC234775.1-201ENST00000454247 670 ntBASIC4.52□□□□□ -1.69
RNF38Q9H0F5 AC010469.1-201ENST00000463864 576 ntBASIC4.52□□□□□ -1.69
RNF38Q9H0F5 RPL5P30-201ENST00000465511 891 ntBASIC4.52□□□□□ -1.69
RNF38Q9H0F5 AC104472.2-201ENST00000469035 601 ntBASIC4.52□□□□□ -1.69
RNF38Q9H0F5 RN7SL283P-201ENST00000489055 303 ntBASIC4.52□□□□□ -1.69
RNF38Q9H0F5 RN7SL812P-201ENST00000493791 279 ntBASIC4.52□□□□□ -1.69
RNF38Q9H0F5 AC135721.1-201ENST00000497954 479 ntBASIC4.52□□□□□ -1.69
RNF38Q9H0F5 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.52□□□□□ -1.69
RNF38Q9H0F5 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.52□□□□□ -1.69
RNF38Q9H0F5 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.52□□□□□ -1.69
RNF38Q9H0F5 RNU6-264P-201ENST00000517134 104 ntBASIC4.52□□□□□ -1.69
RNF38Q9H0F5 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.52□□□□□ -1.69
RNF38Q9H0F5 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.52□□□□□ -1.69
RNF38Q9H0F5 MTCO3P23-201ENST00000561363 289 ntBASIC4.52□□□□□ -1.69
RNF38Q9H0F5 AC106782.4-201ENST00000568264 210 ntBASIC4.52□□□□□ -1.69
RNF38Q9H0F5 MIR3160-1-201ENST00000577972 85 ntBASIC4.52□□□□□ -1.69
RNF38Q9H0F5 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
RNF38Q9H0F5 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC4.52□□□□□ -1.69
RNF38Q9H0F5 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.52□□□□□ -1.69
RNF38Q9H0F5 AC011890.2-201ENST00000613393 294 ntBASIC4.52□□□□□ -1.69
RNF38Q9H0F5 AL138726.1-201ENST00000614873 333 ntBASIC4.52□□□□□ -1.69
RNF38Q9H0F5 AL021997.2-201ENST00000615674 271 ntBASIC4.52□□□□□ -1.69
RNF38Q9H0F5 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
RNF38Q9H0F5 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
RNF38Q9H0F5 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RNF38Q9H0F5 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RNF38Q9H0F5 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.52□□□□□ -1.69
RNF38Q9H0F5 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
RNF38Q9H0F5 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RNF38Q9H0F5 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
RNF38Q9H0F5 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RNF38Q9H0F5 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RNF38Q9H0F5 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.51□□□□□ -1.69
RNF38Q9H0F5 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RNF38Q9H0F5 MIR383-201ENST00000362257 73 ntBASIC4.51□□□□□ -1.69
RNF38Q9H0F5 RNA5SP307-201ENST00000362863 116 ntBASIC4.51□□□□□ -1.69
RNF38Q9H0F5 RNU6-238P-201ENST00000363313 106 ntBASIC4.51□□□□□ -1.69
RNF38Q9H0F5 Y_RNA.463-201ENST00000384271 102 ntBASIC4.51□□□□□ -1.69
RNF38Q9H0F5 RNY1P14-201ENST00000384426 108 ntBASIC4.51□□□□□ -1.69
RNF38Q9H0F5 RNU6-516P-201ENST00000411381 104 ntBASIC4.51□□□□□ -1.69
RNF38Q9H0F5 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC4.51□□□□□ -1.69
RNF38Q9H0F5 BX682237.1-201ENST00000415016 335 ntBASIC4.51□□□□□ -1.69
RNF38Q9H0F5 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.51□□□□□ -1.69
RNF38Q9H0F5 AC099677.1-201ENST00000420575 175 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 143.1 ms