Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 RNU6-371P-201ENST00000364283 108 ntBASIC4.92□□□□□ -1.62
TRIM56Q9BRZ2 RNU6-209P-201ENST00000384118 107 ntBASIC4.92□□□□□ -1.62
TRIM56Q9BRZ2 Y_RNA.526-201ENST00000384572 110 ntBASIC4.92□□□□□ -1.62
TRIM56Q9BRZ2 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
TRIM56Q9BRZ2 RPL21P1-201ENST00000399532 476 ntBASIC4.92□□□□□ -1.62
TRIM56Q9BRZ2 MIR548I3-201ENST00000408378 149 ntBASIC4.92□□□□□ -1.62
TRIM56Q9BRZ2 MIR1302-6-201ENST00000408466 90 ntBASIC4.92□□□□□ -1.62
TRIM56Q9BRZ2 MIR548I1-201ENST00000408810 149 ntBASIC4.92□□□□□ -1.62
TRIM56Q9BRZ2 MTCO1P39-201ENST00000426148 480 ntBASIC4.92□□□□□ -1.62
TRIM56Q9BRZ2 ARL5AP4-201ENST00000430731 512 ntBASIC4.92□□□□□ -1.62
TRIM56Q9BRZ2 AC073063.1-201ENST00000434352 607 ntBASIC4.92□□□□□ -1.62
TRIM56Q9BRZ2 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
TRIM56Q9BRZ2 H2AFZP5-201ENST00000446960 382 ntBASIC4.92□□□□□ -1.62
TRIM56Q9BRZ2 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC4.92□□□□□ -1.62
TRIM56Q9BRZ2 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.92□□□□□ -1.62
TRIM56Q9BRZ2 AC133473.1-201ENST00000455173 299 ntBASIC4.92□□□□□ -1.62
TRIM56Q9BRZ2 RPL23AP31-201ENST00000456160 467 ntBASIC4.92□□□□□ -1.62
TRIM56Q9BRZ2 HSPE1P6-201ENST00000479457 291 ntBASIC4.92□□□□□ -1.62
TRIM56Q9BRZ2 AC108860.1-201ENST00000484521 383 ntBASIC4.92□□□□□ -1.62
TRIM56Q9BRZ2 AC040926.1-201ENST00000530195 238 ntBASIC4.92□□□□□ -1.62
TRIM56Q9BRZ2 AC009643.1-201ENST00000532030 391 ntBASIC4.92□□□□□ -1.62
TRIM56Q9BRZ2 AC023157.2-201ENST00000540596 141 ntBASIC4.92□□□□□ -1.62
TRIM56Q9BRZ2 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.92□□□□□ -1.62
TRIM56Q9BRZ2 AC093249.4-201ENST00000564755 259 ntBASIC4.92□□□□□ -1.62
TRIM56Q9BRZ2 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.92□□□□□ -1.62
TRIM56Q9BRZ2 AC125232.2-201ENST00000592457 143 ntBASIC4.92□□□□□ -1.62
TRIM56Q9BRZ2 AC078899.3-201ENST00000599065 212 ntBASIC4.92□□□□□ -1.62
TRIM56Q9BRZ2 RNU6-85P-201ENST00000605989 107 ntBASIC4.92□□□□□ -1.62
TRIM56Q9BRZ2 AL591516.1-201ENST00000611326 274 ntBASIC4.92□□□□□ -1.62
TRIM56Q9BRZ2 MAPK10-349ENST00000641767 3661 ntBASIC4.92□□□□□ -1.62
TRIM56Q9BRZ2 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
TRIM56Q9BRZ2 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
TRIM56Q9BRZ2 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
TRIM56Q9BRZ2 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
TRIM56Q9BRZ2 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
TRIM56Q9BRZ2 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.91□□□□□ -1.62
TRIM56Q9BRZ2 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.91□□□□□ -1.62
TRIM56Q9BRZ2 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
TRIM56Q9BRZ2 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
TRIM56Q9BRZ2 RNU6-1303P-201ENST00000364841 107 ntBASIC4.91□□□□□ -1.62
TRIM56Q9BRZ2 RNU6-472P-201ENST00000384299 107 ntBASIC4.91□□□□□ -1.62
TRIM56Q9BRZ2 AL592291.1-201ENST00000403830 352 ntBASIC4.91□□□□□ -1.62
TRIM56Q9BRZ2 RNA5SP296-201ENST00000410523 111 ntBASIC4.91□□□□□ -1.62
TRIM56Q9BRZ2 RNU4-61P-201ENST00000411243 107 ntBASIC4.91□□□□□ -1.62
TRIM56Q9BRZ2 RPL21P90-201ENST00000415692 466 ntBASIC4.91□□□□□ -1.62
TRIM56Q9BRZ2 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.91□□□□□ -1.62
TRIM56Q9BRZ2 AC108032.1-201ENST00000416706 207 ntBASIC4.91□□□□□ -1.62
TRIM56Q9BRZ2 BX842559.1-201ENST00000419615 532 ntBASIC4.91□□□□□ -1.62
TRIM56Q9BRZ2 RPS15AP6-201ENST00000420703 385 ntBASIC4.91□□□□□ -1.62
TRIM56Q9BRZ2 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.91□□□□□ -1.62
TRIM56Q9BRZ2 AL772161.1-201ENST00000439130 476 ntBASIC4.91□□□□□ -1.62
TRIM56Q9BRZ2 RPL21P2-201ENST00000440049 481 ntBASIC4.91□□□□□ -1.62
TRIM56Q9BRZ2 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.91□□□□□ -1.62
TRIM56Q9BRZ2 HSFY6P-201ENST00000445573 403 ntBASIC4.91□□□□□ -1.62
TRIM56Q9BRZ2 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.91□□□□□ -1.62
TRIM56Q9BRZ2 RNU6-1132P-201ENST00000459214 107 ntBASIC4.91□□□□□ -1.62
TRIM56Q9BRZ2 RPL23AP56-201ENST00000460778 453 ntBASIC4.91□□□□□ -1.62
TRIM56Q9BRZ2 RN7SL517P-201ENST00000462240 305 ntBASIC4.91□□□□□ -1.62
TRIM56Q9BRZ2 AC012158.1-204ENST00000483430 465 ntBASIC4.91□□□□□ -1.62
TRIM56Q9BRZ2 RPS15AP34-201ENST00000487776 387 ntBASIC4.91□□□□□ -1.62
TRIM56Q9BRZ2 AC069499.1-201ENST00000489433 509 ntBASIC4.91□□□□□ -1.62
TRIM56Q9BRZ2 AC110792.1-201ENST00000491826 472 ntBASIC4.91□□□□□ -1.62
TRIM56Q9BRZ2 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.91□□□□□ -1.62
TRIM56Q9BRZ2 AC004980.4-201ENST00000513375 203 ntBASIC4.91□□□□□ -1.62
TRIM56Q9BRZ2 RNA5SP464-201ENST00000516251 108 ntBASIC4.91□□□□□ -1.62
TRIM56Q9BRZ2 RNU6-914P-201ENST00000516749 109 ntBASIC4.91□□□□□ -1.62
TRIM56Q9BRZ2 RN7SKP260-201ENST00000516907 149 ntBASIC4.91□□□□□ -1.62
TRIM56Q9BRZ2 RNU7-4P-201ENST00000516961 62 ntBASIC4.91□□□□□ -1.62
TRIM56Q9BRZ2 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC4.91□□□□□ -1.62
TRIM56Q9BRZ2 AC104576.1-201ENST00000524225 88 ntBASIC4.91□□□□□ -1.62
TRIM56Q9BRZ2 AC026470.2-201ENST00000561492 181 ntBASIC4.91□□□□□ -1.62
TRIM56Q9BRZ2 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.91□□□□□ -1.62
TRIM56Q9BRZ2 SNORD91B-202ENST00000608459 222 ntBASIC4.91□□□□□ -1.62
TRIM56Q9BRZ2 AC107294.1-201ENST00000609524 467 ntBASIC4.91□□□□□ -1.62
TRIM56Q9BRZ2 AC093799.2-201ENST00000610062 578 ntBASIC4.91□□□□□ -1.62
TRIM56Q9BRZ2 AC005344.1-201ENST00000613391 459 ntBASIC4.91□□□□□ -1.62
TRIM56Q9BRZ2 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC4.91□□□□□ -1.62
TRIM56Q9BRZ2 AC141273.2-201ENST00000618989 130 ntBASIC4.91□□□□□ -1.62
TRIM56Q9BRZ2 AC019206.1-201ENST00000621938 425 ntBASIC4.91□□□□□ -1.62
TRIM56Q9BRZ2 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.91□□□□□ -1.62
TRIM56Q9BRZ2 MIR6715B-201ENST00000637172 77 ntBASIC4.91□□□□□ -1.62
TRIM56Q9BRZ2 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
TRIM56Q9BRZ2 LINC01109-201ENST00000603837 3081 ntBASIC4.91□□□□□ -1.62
TRIM56Q9BRZ2 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
TRIM56Q9BRZ2 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
TRIM56Q9BRZ2 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
TRIM56Q9BRZ2 AC005183.1-201ENST00000603687 1979 ntBASIC4.91□□□□□ -1.62
TRIM56Q9BRZ2 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
TRIM56Q9BRZ2 DHX9P1-201ENST00000436565 3076 ntBASIC4.91□□□□□ -1.62
TRIM56Q9BRZ2 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.62
TRIM56Q9BRZ2 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
TRIM56Q9BRZ2 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.62
TRIM56Q9BRZ2 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
TRIM56Q9BRZ2 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
TRIM56Q9BRZ2 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
TRIM56Q9BRZ2 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.9□□□□□ -1.62
TRIM56Q9BRZ2 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
TRIM56Q9BRZ2 RNU6-790P-201ENST00000384479 105 ntBASIC4.9□□□□□ -1.63
TRIM56Q9BRZ2 Y_RNA.534-201ENST00000384599 112 ntBASIC4.9□□□□□ -1.63
TRIM56Q9BRZ2 AL138885.1-201ENST00000405921 675 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms