Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 RNU6-1339P-201ENST00000363574 91 ntBASIC1.18□□□□□ -2.22
VPS25Q9BRG1 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC1.18□□□□□ -2.22
VPS25Q9BRG1 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC1.18□□□□□ -2.22
VPS25Q9BRG1 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.18□□□□□ -2.22
VPS25Q9BRG1 THAP5P1-201ENST00000439089 262 ntBASIC1.18□□□□□ -2.22
VPS25Q9BRG1 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.18□□□□□ -2.22
VPS25Q9BRG1 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.18□□□□□ -2.22
VPS25Q9BRG1 RFC5P1-201ENST00000454419 874 ntBASIC1.18□□□□□ -2.22
VPS25Q9BRG1 AL049874.1-201ENST00000489560 388 ntBASIC1.18□□□□□ -2.22
VPS25Q9BRG1 AC104090.1-201ENST00000506341 1171 ntBASIC1.18□□□□□ -2.22
VPS25Q9BRG1 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC1.18□□□□□ -2.22
VPS25Q9BRG1 AC022483.1-201ENST00000514020 567 ntBASIC1.18□□□□□ -2.22
VPS25Q9BRG1 AC026801.2-201ENST00000515352 425 ntBASIC1.18□□□□□ -2.22
VPS25Q9BRG1 RNU6-889P-201ENST00000517189 103 ntBASIC1.18□□□□□ -2.22
VPS25Q9BRG1 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC1.18□□□□□ -2.22
VPS25Q9BRG1 AC027104.1-201ENST00000563702 681 ntBASIC1.18□□□□□ -2.22
VPS25Q9BRG1 AC106782.4-201ENST00000568264 210 ntBASIC1.18□□□□□ -2.22
VPS25Q9BRG1 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC1.18□□□□□ -2.22
VPS25Q9BRG1 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC1.18□□□□□ -2.22
VPS25Q9BRG1 MIR4697-201ENST00000582977 78 ntBASIC1.18□□□□□ -2.22
VPS25Q9BRG1 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC1.18□□□□□ -2.22
VPS25Q9BRG1 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.18□□□□□ -2.22
VPS25Q9BRG1 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
VPS25Q9BRG1 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.18□□□□□ -2.22
VPS25Q9BRG1 AL162233.1-201ENST00000620014 944 ntBASIC1.18□□□□□ -2.22
VPS25Q9BRG1 MIR8057-201ENST00000620957 69 ntBASIC1.18□□□□□ -2.22
VPS25Q9BRG1 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
VPS25Q9BRG1 AC007998.5-201ENST00000622938 237 ntBASIC1.18□□□□□ -2.22
VPS25Q9BRG1 AC034229.5-201ENST00000624258 185 ntBASIC1.18□□□□□ -2.22
VPS25Q9BRG1 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC1.18□□□□□ -2.22
VPS25Q9BRG1 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC1.18□□□□□ -2.22
VPS25Q9BRG1 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.18□□□□□ -2.22
VPS25Q9BRG1 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.18□□□□□ -2.22
VPS25Q9BRG1 AP000776.1-201ENST00000530032 1663 ntBASIC1.17□□□□□ -2.22
VPS25Q9BRG1 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC1.17□□□□□ -2.22
VPS25Q9BRG1 OR4G11P-202ENST00000642116 1414 ntBASIC1.17□□□□□ -2.22
VPS25Q9BRG1 RNU6-486P-201ENST00000363116 107 ntBASIC1.17□□□□□ -2.22
VPS25Q9BRG1 MIR34B-201ENST00000385076 84 ntBASIC1.17□□□□□ -2.22
VPS25Q9BRG1 MIR514A1-201ENST00000385133 98 ntBASIC1.17□□□□□ -2.22
VPS25Q9BRG1 MIR888-201ENST00000401186 77 ntBASIC1.17□□□□□ -2.22
VPS25Q9BRG1 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC1.17□□□□□ -2.22
VPS25Q9BRG1 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.17□□□□□ -2.22
VPS25Q9BRG1 HMGN2P23-201ENST00000456759 269 ntBASIC1.17□□□□□ -2.22
VPS25Q9BRG1 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.17□□□□□ -2.22
VPS25Q9BRG1 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.17□□□□□ -2.22
VPS25Q9BRG1 AC023790.1-201ENST00000482174 347 ntBASIC1.17□□□□□ -2.22
VPS25Q9BRG1 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC1.17□□□□□ -2.22
VPS25Q9BRG1 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.17□□□□□ -2.22
VPS25Q9BRG1 MEG8-218ENST00000556720 456 ntTSL 3 BASIC1.17□□□□□ -2.22
VPS25Q9BRG1 GTF3AP2-201ENST00000557014 266 ntBASIC1.17□□□□□ -2.22
VPS25Q9BRG1 MIR4700-201ENST00000578311 74 ntBASIC1.17□□□□□ -2.22
VPS25Q9BRG1 ABBA01006766.1-201ENST00000584728 294 ntBASIC1.17□□□□□ -2.22
VPS25Q9BRG1 MIR4765-201ENST00000585007 77 ntBASIC1.17□□□□□ -2.22
VPS25Q9BRG1 MIR4443-201ENST00000585052 53 ntBASIC1.17□□□□□ -2.22
VPS25Q9BRG1 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.17□□□□□ -2.22
VPS25Q9BRG1 AL451007.1-201ENST00000595491 289 ntBASIC1.17□□□□□ -2.22
VPS25Q9BRG1 AL020997.3-201ENST00000602843 359 ntBASIC1.17□□□□□ -2.22
VPS25Q9BRG1 AP003973.1-201ENST00000604639 691 ntBASIC1.17□□□□□ -2.22
VPS25Q9BRG1 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.17□□□□□ -2.22
VPS25Q9BRG1 AC119674.1-220ENST00000641502 1048 ntBASIC1.17□□□□□ -2.22
VPS25Q9BRG1 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
VPS25Q9BRG1 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
VPS25Q9BRG1 AP000648.3-201ENST00000623539 4507 ntBASIC1.16□□□□□ -2.22
VPS25Q9BRG1 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.16□□□□□ -2.22
VPS25Q9BRG1 MIR30A-201ENST00000385092 71 ntBASIC1.16□□□□□ -2.22
VPS25Q9BRG1 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC1.16□□□□□ -2.22
VPS25Q9BRG1 RPL31P54-201ENST00000429803 370 ntBASIC1.16□□□□□ -2.22
VPS25Q9BRG1 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC1.16□□□□□ -2.22
VPS25Q9BRG1 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC1.16□□□□□ -2.22
VPS25Q9BRG1 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC1.16□□□□□ -2.22
VPS25Q9BRG1 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC1.16□□□□□ -2.22
VPS25Q9BRG1 RPL23AP16-201ENST00000441715 421 ntBASIC1.16□□□□□ -2.22
VPS25Q9BRG1 SNORD121B-201ENST00000458838 81 ntBASIC1.16□□□□□ -2.22
VPS25Q9BRG1 RN7SL432P-201ENST00000484057 298 ntBASIC1.16□□□□□ -2.22
VPS25Q9BRG1 HSPA8P13-201ENST00000523715 472 ntBASIC1.16□□□□□ -2.22
VPS25Q9BRG1 DUXAP5-201ENST00000529668 529 ntBASIC1.16□□□□□ -2.22
VPS25Q9BRG1 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC1.16□□□□□ -2.22
VPS25Q9BRG1 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.16□□□□□ -2.22
VPS25Q9BRG1 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC1.16□□□□□ -2.22
VPS25Q9BRG1 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.16□□□□□ -2.22
VPS25Q9BRG1 CR383656.7-201ENST00000548164 174 ntBASIC1.16□□□□□ -2.22
VPS25Q9BRG1 AC009268.1-201ENST00000561352 1203 ntBASIC1.16□□□□□ -2.22
VPS25Q9BRG1 AC034105.4-201ENST00000568304 277 ntBASIC1.16□□□□□ -2.22
VPS25Q9BRG1 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.16□□□□□ -2.22
VPS25Q9BRG1 AL671309.1-201ENST00000603750 544 ntBASIC1.16□□□□□ -2.22
VPS25Q9BRG1 AP001521.1-201ENST00000609150 300 ntBASIC1.16□□□□□ -2.22
VPS25Q9BRG1 AC006133.1-201ENST00000617106 264 ntBASIC1.16□□□□□ -2.22
VPS25Q9BRG1 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC1.16□□□□□ -2.22
VPS25Q9BRG1 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.16□□□□□ -2.22
VPS25Q9BRG1 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC1.16□□□□□ -2.22
VPS25Q9BRG1 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.16□□□□□ -2.22
VPS25Q9BRG1 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
VPS25Q9BRG1 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
VPS25Q9BRG1 GNG5P1-201ENST00000255500 204 ntBASIC1.15□□□□□ -2.23
VPS25Q9BRG1 MIR424-201ENST00000362227 98 ntBASIC1.15□□□□□ -2.23
VPS25Q9BRG1 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
VPS25Q9BRG1 RNU6-741P-201ENST00000383889 107 ntBASIC1.15□□□□□ -2.23
VPS25Q9BRG1 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
VPS25Q9BRG1 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.15□□□□□ -2.23
VPS25Q9BRG1 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms