Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 AL365204.3-201ENST00000612448 685 ntBASIC3.51□□□□□ -1.85
NPAS1Q99742 AL356321.1-201ENST00000621360 228 ntBASIC3.51□□□□□ -1.85
NPAS1Q99742 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.51□□□□□ -1.85
NPAS1Q99742 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.51□□□□□ -1.85
NPAS1Q99742 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
NPAS1Q99742 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
NPAS1Q99742 CKAP2P1-201ENST00000555477 2049 ntBASIC3.51□□□□□ -1.85
NPAS1Q99742 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
NPAS1Q99742 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
NPAS1Q99742 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
NPAS1Q99742 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
NPAS1Q99742 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.5□□□□□ -1.85
NPAS1Q99742 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
NPAS1Q99742 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
NPAS1Q99742 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.5□□□□□ -1.85
NPAS1Q99742 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
NPAS1Q99742 Y_RNA.89-201ENST00000363031 102 ntBASIC3.5□□□□□ -1.85
NPAS1Q99742 Y_RNA.255-201ENST00000364581 97 ntBASIC3.5□□□□□ -1.85
NPAS1Q99742 RNU6-61P-201ENST00000365528 109 ntBASIC3.5□□□□□ -1.85
NPAS1Q99742 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
NPAS1Q99742 Y_RNA.576-201ENST00000384781 102 ntBASIC3.5□□□□□ -1.85
NPAS1Q99742 HSPE1P26-201ENST00000405341 275 ntBASIC3.5□□□□□ -1.85
NPAS1Q99742 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.5□□□□□ -1.85
NPAS1Q99742 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.5□□□□□ -1.85
NPAS1Q99742 ZNF90P2-204ENST00000419323 1075 ntBASIC3.5□□□□□ -1.85
NPAS1Q99742 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.5□□□□□ -1.85
NPAS1Q99742 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.5□□□□□ -1.85
NPAS1Q99742 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC3.5□□□□□ -1.85
NPAS1Q99742 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.5□□□□□ -1.85
NPAS1Q99742 MTND1P2-201ENST00000430604 821 ntBASIC3.5□□□□□ -1.85
NPAS1Q99742 GTF2IP20-201ENST00000431663 360 ntBASIC3.5□□□□□ -1.85
NPAS1Q99742 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.5□□□□□ -1.85
NPAS1Q99742 AC016691.1-201ENST00000441321 413 ntBASIC3.5□□□□□ -1.85
NPAS1Q99742 PRDX3P3-201ENST00000447765 522 ntBASIC3.5□□□□□ -1.85
NPAS1Q99742 AL162395.1-201ENST00000457882 422 ntBASIC3.5□□□□□ -1.85
NPAS1Q99742 RPL23AP14-201ENST00000468281 468 ntBASIC3.5□□□□□ -1.85
NPAS1Q99742 RN7SL323P-201ENST00000494712 295 ntBASIC3.5□□□□□ -1.85
NPAS1Q99742 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.5□□□□□ -1.85
NPAS1Q99742 FAM92A1P2-202ENST00000504766 877 ntBASIC3.5□□□□□ -1.85
NPAS1Q99742 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.5□□□□□ -1.85
NPAS1Q99742 RNU6-143P-201ENST00000516942 93 ntBASIC3.5□□□□□ -1.85
NPAS1Q99742 AC022695.1-201ENST00000522089 237 ntBASIC3.5□□□□□ -1.85
NPAS1Q99742 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
NPAS1Q99742 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
NPAS1Q99742 HSPE1P5-201ENST00000561489 272 ntBASIC3.5□□□□□ -1.85
NPAS1Q99742 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.5□□□□□ -1.85
NPAS1Q99742 MIR4286-201ENST00000580651 93 ntBASIC3.5□□□□□ -1.85
NPAS1Q99742 AC174048.1-201ENST00000603389 144 ntBASIC3.5□□□□□ -1.85
NPAS1Q99742 AL354798.1-201ENST00000622505 329 ntBASIC3.5□□□□□ -1.85
NPAS1Q99742 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
NPAS1Q99742 AL137003.2-201ENST00000606924 2538 ntBASIC3.5□□□□□ -1.85
NPAS1Q99742 UBE3AP2-201ENST00000429033 2259 ntBASIC3.5□□□□□ -1.85
NPAS1Q99742 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
NPAS1Q99742 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
NPAS1Q99742 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
NPAS1Q99742 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.49□□□□□ -1.85
NPAS1Q99742 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
NPAS1Q99742 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
NPAS1Q99742 Y_RNA.38-201ENST00000362617 102 ntBASIC3.49□□□□□ -1.85
NPAS1Q99742 SNORD115-7-201ENST00000365306 82 ntBASIC3.49□□□□□ -1.85
NPAS1Q99742 RNU6-116P-201ENST00000384042 109 ntBASIC3.49□□□□□ -1.85
NPAS1Q99742 HMGN2P8-201ENST00000391458 268 ntBASIC3.49□□□□□ -1.85
NPAS1Q99742 RNU6-387P-201ENST00000411331 105 ntBASIC3.49□□□□□ -1.85
NPAS1Q99742 AC245054.1-201ENST00000420944 258 ntBASIC3.49□□□□□ -1.85
NPAS1Q99742 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.49□□□□□ -1.85
NPAS1Q99742 AC087650.1-201ENST00000431445 468 ntBASIC3.49□□□□□ -1.85
NPAS1Q99742 AL591212.2-201ENST00000433923 257 ntBASIC3.49□□□□□ -1.85
NPAS1Q99742 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.49□□□□□ -1.85
NPAS1Q99742 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.49□□□□□ -1.85
NPAS1Q99742 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
NPAS1Q99742 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.49□□□□□ -1.85
NPAS1Q99742 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.49□□□□□ -1.85
NPAS1Q99742 AC004801.2-202ENST00000463559 283 ntBASIC3.49□□□□□ -1.85
NPAS1Q99742 RBBP4P6-201ENST00000508098 202 ntBASIC3.49□□□□□ -1.85
NPAS1Q99742 RAC1P2-201ENST00000511164 579 ntBASIC3.49□□□□□ -1.85
NPAS1Q99742 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.49□□□□□ -1.85
NPAS1Q99742 RNU6-927P-201ENST00000516199 100 ntBASIC3.49□□□□□ -1.85
NPAS1Q99742 SNORA40.12-201ENST00000516329 111 ntBASIC3.49□□□□□ -1.85
NPAS1Q99742 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.49□□□□□ -1.85
NPAS1Q99742 AC007991.1-201ENST00000522680 631 ntBASIC3.49□□□□□ -1.85
NPAS1Q99742 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.49□□□□□ -1.85
NPAS1Q99742 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.49□□□□□ -1.85
NPAS1Q99742 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.49□□□□□ -1.85
NPAS1Q99742 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.49□□□□□ -1.85
NPAS1Q99742 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.49□□□□□ -1.85
NPAS1Q99742 MTCO3P24-201ENST00000572729 782 ntBASIC3.49□□□□□ -1.85
NPAS1Q99742 AC024619.4-201ENST00000580924 316 ntBASIC3.49□□□□□ -1.85
NPAS1Q99742 AC067852.3-201ENST00000589177 561 ntBASIC3.49□□□□□ -1.85
NPAS1Q99742 AL359547.2-201ENST00000615810 418 ntBASIC3.49□□□□□ -1.85
NPAS1Q99742 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
NPAS1Q99742 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.49□□□□□ -1.85
NPAS1Q99742 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.49□□□□□ -1.85
NPAS1Q99742 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.49□□□□□ -1.85
NPAS1Q99742 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.49□□□□□ -1.85
NPAS1Q99742 RIOK3P1-201ENST00000418778 1528 ntBASIC3.49□□□□□ -1.85
NPAS1Q99742 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.49□□□□□ -1.85
NPAS1Q99742 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
NPAS1Q99742 AF127577.6-201ENST00000623352 2191 ntBASIC3.48□□□□□ -1.85
NPAS1Q99742 AC006020.1-201ENST00000420179 1854 ntBASIC3.48□□□□□ -1.85
NPAS1Q99742 AC004520.1-201ENST00000608362 1413 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms