Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
CDCA3Q99618 MIR30E-201ENST00000362104 92 ntBASIC3.08□□□□□ -1.92
CDCA3Q99618 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.08□□□□□ -1.92
CDCA3Q99618 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
CDCA3Q99618 SNORD116-9-201ENST00000384000 95 ntBASIC3.08□□□□□ -1.92
CDCA3Q99618 SNORD116-3-201ENST00000384287 95 ntBASIC3.08□□□□□ -1.92
CDCA3Q99618 SNORD116-7-201ENST00000384404 95 ntBASIC3.08□□□□□ -1.92
CDCA3Q99618 SNORD116-5-201ENST00000384462 95 ntBASIC3.08□□□□□ -1.92
CDCA3Q99618 MIR196B-201ENST00000384852 84 ntBASIC3.08□□□□□ -1.92
CDCA3Q99618 MIR19A-201ENST00000384878 82 ntBASIC3.08□□□□□ -1.92
CDCA3Q99618 AL360182.1-201ENST00000397433 468 ntBASIC3.08□□□□□ -1.92
CDCA3Q99618 RNA5SP293-201ENST00000410527 113 ntBASIC3.08□□□□□ -1.92
CDCA3Q99618 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.08□□□□□ -1.92
CDCA3Q99618 SETP8-201ENST00000435341 628 ntBASIC3.08□□□□□ -1.92
CDCA3Q99618 RPL35AP22-201ENST00000436855 335 ntBASIC3.08□□□□□ -1.92
CDCA3Q99618 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
CDCA3Q99618 RPS12P18-201ENST00000442381 270 ntBASIC3.08□□□□□ -1.92
CDCA3Q99618 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.08□□□□□ -1.92
CDCA3Q99618 AP000936.2-201ENST00000447151 681 ntBASIC3.08□□□□□ -1.92
CDCA3Q99618 AL592447.1-201ENST00000447592 540 ntBASIC3.08□□□□□ -1.92
CDCA3Q99618 USP9YP12-201ENST00000450481 570 ntBASIC3.08□□□□□ -1.92
CDCA3Q99618 SNORD109B-201ENST00000458961 67 ntBASIC3.08□□□□□ -1.92
CDCA3Q99618 SNORD109A-201ENST00000459128 67 ntBASIC3.08□□□□□ -1.92
CDCA3Q99618 RPS15AP36-201ENST00000492022 382 ntBASIC3.08□□□□□ -1.92
CDCA3Q99618 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC3.08□□□□□ -1.92
CDCA3Q99618 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.08□□□□□ -1.92
CDCA3Q99618 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.08□□□□□ -1.92
CDCA3Q99618 AC117522.2-201ENST00000510049 657 ntBASIC3.08□□□□□ -1.92
CDCA3Q99618 AC109464.2-201ENST00000510242 943 ntBASIC3.08□□□□□ -1.92
CDCA3Q99618 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.08□□□□□ -1.92
CDCA3Q99618 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.08□□□□□ -1.92
CDCA3Q99618 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.08□□□□□ -1.92
CDCA3Q99618 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.08□□□□□ -1.92
CDCA3Q99618 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.08□□□□□ -1.92
CDCA3Q99618 COX6CP3-201ENST00000580869 223 ntBASIC3.08□□□□□ -1.92
CDCA3Q99618 PIGPP4-201ENST00000584447 307 ntBASIC3.08□□□□□ -1.92
CDCA3Q99618 AC007038.2-201ENST00000608095 740 ntBASIC3.08□□□□□ -1.92
CDCA3Q99618 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.08□□□□□ -1.92
CDCA3Q99618 AL391813.2-201ENST00000609113 322 ntBASIC3.08□□□□□ -1.92
CDCA3Q99618 AL603758.1-201ENST00000618654 241 ntBASIC3.08□□□□□ -1.92
CDCA3Q99618 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.08□□□□□ -1.92
CDCA3Q99618 AF117829.1-206ENST00000621883 3802 ntBASIC3.08□□□□□ -1.92
CDCA3Q99618 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CDCA3Q99618 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CDCA3Q99618 DDX10P1-201ENST00000448545 1933 ntBASIC3.07□□□□□ -1.92
CDCA3Q99618 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
CDCA3Q99618 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
CDCA3Q99618 AL138713.1-201ENST00000624026 2130 ntBASIC3.07□□□□□ -1.92
CDCA3Q99618 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CDCA3Q99618 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
CDCA3Q99618 DEFB108F-201ENST00000344638 222 ntBASIC3.07□□□□□ -1.92
CDCA3Q99618 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CDCA3Q99618 RNY3P10-201ENST00000384764 102 ntBASIC3.07□□□□□ -1.92
CDCA3Q99618 MIR9-1-201ENST00000385198 89 ntBASIC3.07□□□□□ -1.92
CDCA3Q99618 RNU4-65P-201ENST00000410473 140 ntBASIC3.07□□□□□ -1.92
CDCA3Q99618 UBE2FP1-201ENST00000416536 447 ntBASIC3.07□□□□□ -1.92
CDCA3Q99618 USP9YP13-201ENST00000417797 480 ntBASIC3.07□□□□□ -1.92
CDCA3Q99618 YPEL5P1-201ENST00000419731 367 ntBASIC3.07□□□□□ -1.92
CDCA3Q99618 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.07□□□□□ -1.92
CDCA3Q99618 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.07□□□□□ -1.92
CDCA3Q99618 OR2B8P-201ENST00000432841 938 ntBASIC3.07□□□□□ -1.92
CDCA3Q99618 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC3.07□□□□□ -1.92
CDCA3Q99618 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.07□□□□□ -1.92
CDCA3Q99618 AL049734.2-201ENST00000441066 616 ntBASIC3.07□□□□□ -1.92
CDCA3Q99618 COX6CP2-201ENST00000444980 225 ntBASIC3.07□□□□□ -1.92
CDCA3Q99618 AC126389.1-201ENST00000477436 290 ntBASIC3.07□□□□□ -1.92
CDCA3Q99618 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.07□□□□□ -1.92
CDCA3Q99618 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.07□□□□□ -1.92
CDCA3Q99618 AC117522.3-201ENST00000507974 584 ntBASIC3.07□□□□□ -1.92
CDCA3Q99618 AC105914.1-201ENST00000511798 226 ntBASIC3.07□□□□□ -1.92
CDCA3Q99618 RNU6-201P-201ENST00000517100 61 ntBASIC3.07□□□□□ -1.92
CDCA3Q99618 AP002770.2-201ENST00000543613 532 ntBASIC3.07□□□□□ -1.92
CDCA3Q99618 CYCSP39-201ENST00000565821 309 ntBASIC3.07□□□□□ -1.92
CDCA3Q99618 AL356432.3-201ENST00000568952 465 ntBASIC3.07□□□□□ -1.92
CDCA3Q99618 AP005136.1-201ENST00000579765 429 ntBASIC3.07□□□□□ -1.92
CDCA3Q99618 AP001029.3-201ENST00000588063 596 ntBASIC3.07□□□□□ -1.92
CDCA3Q99618 AC093838.1-201ENST00000613014 469 ntBASIC3.07□□□□□ -1.92
CDCA3Q99618 AL158063.1-201ENST00000615349 536 ntBASIC3.07□□□□□ -1.92
CDCA3Q99618 AC009159.1-201ENST00000618386 642 ntBASIC3.07□□□□□ -1.92
CDCA3Q99618 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.07□□□□□ -1.92
CDCA3Q99618 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CDCA3Q99618 RNU6-805P-201ENST00000365643 106 ntBASIC3.06□□□□□ -1.92
CDCA3Q99618 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
CDCA3Q99618 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
CDCA3Q99618 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
CDCA3Q99618 Y_RNA.608-201ENST00000410647 95 ntBASIC3.06□□□□□ -1.92
CDCA3Q99618 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.06□□□□□ -1.92
CDCA3Q99618 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.06□□□□□ -1.92
CDCA3Q99618 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.06□□□□□ -1.92
CDCA3Q99618 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.06□□□□□ -1.92
CDCA3Q99618 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC3.06□□□□□ -1.92
CDCA3Q99618 AL121890.1-201ENST00000435457 205 ntBASIC3.06□□□□□ -1.92
CDCA3Q99618 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.06□□□□□ -1.92
CDCA3Q99618 HMGN1P18-201ENST00000457642 277 ntBASIC3.06□□□□□ -1.92
CDCA3Q99618 RPL23AP41-201ENST00000484754 458 ntBASIC3.06□□□□□ -1.92
CDCA3Q99618 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.06□□□□□ -1.92
CDCA3Q99618 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.06□□□□□ -1.92
CDCA3Q99618 FABP5P5-201ENST00000515537 406 ntBASIC3.06□□□□□ -1.92
CDCA3Q99618 AC022878.1-201ENST00000530684 149 ntBASIC3.06□□□□□ -1.92
CDCA3Q99618 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms