Protein–RNA interactions for Protein: Q99536

VAT1, Synaptic vesicle membrane protein VAT-1 homolog, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1Q99536 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
VAT1Q99536 AL137003.2-201ENST00000606924 2538 ntBASIC2.1□□□□□ -2.07
VAT1Q99536 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
VAT1Q99536 RNU1-52P-201ENST00000384190 164 ntBASIC2.1□□□□□ -2.07
VAT1Q99536 SNORA51.11-201ENST00000384442 131 ntBASIC2.1□□□□□ -2.07
VAT1Q99536 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.1□□□□□ -2.07
VAT1Q99536 AL513331.1-201ENST00000411908 397 ntBASIC2.1□□□□□ -2.07
VAT1Q99536 AL161449.1-201ENST00000414531 1199 ntBASIC2.1□□□□□ -2.07
VAT1Q99536 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC2.1□□□□□ -2.07
VAT1Q99536 ZNF736P7Y-201ENST00000425158 820 ntBASIC2.1□□□□□ -2.07
VAT1Q99536 MTCYBP42-201ENST00000444653 1130 ntBASIC2.1□□□□□ -2.07
VAT1Q99536 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.1□□□□□ -2.07
VAT1Q99536 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC2.1□□□□□ -2.07
VAT1Q99536 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.1□□□□□ -2.07
VAT1Q99536 AC010486.1-201ENST00000511793 424 ntBASIC2.1□□□□□ -2.07
VAT1Q99536 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.1□□□□□ -2.07
VAT1Q99536 RN7SKP31-201ENST00000516354 278 ntBASIC2.1□□□□□ -2.07
VAT1Q99536 AP003355.1-201ENST00000518956 587 ntBASIC2.1□□□□□ -2.07
VAT1Q99536 AC022634.1-201ENST00000520765 532 ntBASIC2.1□□□□□ -2.07
VAT1Q99536 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.1□□□□□ -2.07
VAT1Q99536 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.1□□□□□ -2.07
VAT1Q99536 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.1□□□□□ -2.07
VAT1Q99536 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.1□□□□□ -2.07
VAT1Q99536 HIGD1AP17-201ENST00000554576 276 ntBASIC2.1□□□□□ -2.07
VAT1Q99536 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
VAT1Q99536 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.1□□□□□ -2.07
VAT1Q99536 AC023825.1-201ENST00000566704 1030 ntBASIC2.1□□□□□ -2.07
VAT1Q99536 AC005951.2-201ENST00000576282 495 ntBASIC2.1□□□□□ -2.07
VAT1Q99536 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.1□□□□□ -2.07
VAT1Q99536 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.1□□□□□ -2.07
VAT1Q99536 RPS15AP11-201ENST00000594193 385 ntBASIC2.1□□□□□ -2.07
VAT1Q99536 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.1□□□□□ -2.07
VAT1Q99536 AL356280.1-201ENST00000603614 379 ntBASIC2.1□□□□□ -2.07
VAT1Q99536 AC008759.3-201ENST00000613300 508 ntBASIC2.1□□□□□ -2.07
VAT1Q99536 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.1□□□□□ -2.07
VAT1Q99536 AC245884.12-201ENST00000615364 59 ntBASIC2.1□□□□□ -2.07
VAT1Q99536 AL356266.1-201ENST00000623311 483 ntBASIC2.1□□□□□ -2.07
VAT1Q99536 AC064859.1-201ENST00000624741 174 ntBASIC2.1□□□□□ -2.07
VAT1Q99536 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC2.1□□□□□ -2.07
VAT1Q99536 AC010149.2-201ENST00000637608 315 ntBASIC2.1□□□□□ -2.07
VAT1Q99536 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.09□□□□□ -2.07
VAT1Q99536 CDR1-202ENST00000625883 1485 ntBASIC2.09□□□□□ -2.07
VAT1Q99536 Y_RNA.234-201ENST00000364409 97 ntBASIC2.09□□□□□ -2.07
VAT1Q99536 RNU6-741P-201ENST00000383889 107 ntBASIC2.09□□□□□ -2.07
VAT1Q99536 MIR524-201ENST00000385242 87 ntBASIC2.09□□□□□ -2.07
VAT1Q99536 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
VAT1Q99536 AL445529.1-201ENST00000398713 389 ntBASIC2.09□□□□□ -2.07
VAT1Q99536 AC023141.4-201ENST00000412031 328 ntBASIC2.09□□□□□ -2.07
VAT1Q99536 MTND1P23-201ENST00000416931 372 ntBASIC2.09□□□□□ -2.07
VAT1Q99536 AC236972.1-201ENST00000433225 199 ntBASIC2.09□□□□□ -2.07
VAT1Q99536 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.09□□□□□ -2.07
VAT1Q99536 GTF2IP7-202ENST00000436677 309 ntBASIC2.09□□□□□ -2.07
VAT1Q99536 PGBD4P3-201ENST00000440731 581 ntBASIC2.09□□□□□ -2.07
VAT1Q99536 MTND2P20-201ENST00000440805 661 ntBASIC2.09□□□□□ -2.07
VAT1Q99536 IPO7P1-201ENST00000442031 636 ntBASIC2.09□□□□□ -2.07
VAT1Q99536 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.09□□□□□ -2.07
VAT1Q99536 AC096638.1-201ENST00000444678 216 ntBASIC2.09□□□□□ -2.07
VAT1Q99536 COX6CP12-201ENST00000446748 202 ntBASIC2.09□□□□□ -2.07
VAT1Q99536 AC017099.1-201ENST00000448261 1028 ntBASIC2.09□□□□□ -2.07
VAT1Q99536 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.09□□□□□ -2.07
VAT1Q99536 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.09□□□□□ -2.07
VAT1Q99536 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.09□□□□□ -2.07
VAT1Q99536 SNORD121B-201ENST00000458838 81 ntBASIC2.09□□□□□ -2.07
VAT1Q99536 RNU7-26P-201ENST00000458980 63 ntBASIC2.09□□□□□ -2.07
VAT1Q99536 RPS20P20-201ENST00000460498 340 ntBASIC2.09□□□□□ -2.07
VAT1Q99536 UBE2DNL-203ENST00000474922 222 ntBASIC2.09□□□□□ -2.07
VAT1Q99536 HMGB1P28-201ENST00000507778 552 ntBASIC2.09□□□□□ -2.07
VAT1Q99536 NDUFB4P2-201ENST00000509515 391 ntBASIC2.09□□□□□ -2.07
VAT1Q99536 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.09□□□□□ -2.07
VAT1Q99536 MTCO3P27-201ENST00000514397 196 ntBASIC2.09□□□□□ -2.07
VAT1Q99536 SNORA31.18-201ENST00000517043 134 ntBASIC2.09□□□□□ -2.07
VAT1Q99536 IGKV3-31-201ENST00000523109 329 ntBASIC2.09□□□□□ -2.07
VAT1Q99536 NDUFS5P6-201ENST00000529136 295 ntBASIC2.09□□□□□ -2.07
VAT1Q99536 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.09□□□□□ -2.07
VAT1Q99536 AC087897.1-201ENST00000550134 156 ntBASIC2.09□□□□□ -2.07
VAT1Q99536 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
VAT1Q99536 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.09□□□□□ -2.07
VAT1Q99536 AC009127.3-201ENST00000570531 403 ntBASIC2.09□□□□□ -2.07
VAT1Q99536 MIR5694-201ENST00000581190 76 ntBASIC2.09□□□□□ -2.07
VAT1Q99536 MIR4435-1-201ENST00000582552 80 ntBASIC2.09□□□□□ -2.07
VAT1Q99536 MTND4LP5-201ENST00000605152 292 ntBASIC2.09□□□□□ -2.07
VAT1Q99536 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.09□□□□□ -2.07
VAT1Q99536 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.09□□□□□ -2.07
VAT1Q99536 AC010378.1-201ENST00000619270 362 ntBASIC2.09□□□□□ -2.07
VAT1Q99536 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.09□□□□□ -2.07
VAT1Q99536 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.09□□□□□ -2.07
VAT1Q99536 AC068057.2-201ENST00000624047 895 ntBASIC2.09□□□□□ -2.07
VAT1Q99536 AL159972.1-201ENST00000625150 448 ntBASIC2.09□□□□□ -2.07
VAT1Q99536 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC2.09□□□□□ -2.07
VAT1Q99536 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.09□□□□□ -2.08
VAT1Q99536 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.09□□□□□ -2.08
VAT1Q99536 MTND4P35-201ENST00000604257 1375 ntBASIC2.09□□□□□ -2.08
VAT1Q99536 MTND4P1-201ENST00000457501 1466 ntBASIC2.08□□□□□ -2.08
VAT1Q99536 AP005901.5-201ENST00000545779 1796 ntBASIC2.08□□□□□ -2.08
VAT1Q99536 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.08□□□□□ -2.08
VAT1Q99536 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
VAT1Q99536 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
VAT1Q99536 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
VAT1Q99536 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
VAT1Q99536 RNU6-1328P-201ENST00000410938 106 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms