Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 RNU2-33P-201ENST00000410344 192 ntBASIC2.58□□□□□ -2
RPRD1AQ96P16 RNU6-516P-201ENST00000411381 104 ntBASIC2.58□□□□□ -2
RPRD1AQ96P16 VN1R51P-201ENST00000411675 945 ntBASIC2.58□□□□□ -2
RPRD1AQ96P16 USP9YP33-201ENST00000412220 421 ntBASIC2.58□□□□□ -2
RPRD1AQ96P16 USP9YP35-201ENST00000435696 412 ntBASIC2.58□□□□□ -2
RPRD1AQ96P16 SNRPEP7-201ENST00000438350 220 ntBASIC2.58□□□□□ -2
RPRD1AQ96P16 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.58□□□□□ -2
RPRD1AQ96P16 EXOSC3P1-201ENST00000448649 500 ntBASIC2.58□□□□□ -2
RPRD1AQ96P16 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC2.58□□□□□ -2
RPRD1AQ96P16 AC113155.1-201ENST00000511141 769 ntBASIC2.58□□□□□ -2
RPRD1AQ96P16 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.58□□□□□ -2
RPRD1AQ96P16 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
RPRD1AQ96P16 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.58□□□□□ -2
RPRD1AQ96P16 AC009097.3-201ENST00000563557 1018 ntBASIC2.58□□□□□ -2
RPRD1AQ96P16 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.58□□□□□ -2
RPRD1AQ96P16 AC009712.1-201ENST00000564938 316 ntBASIC2.58□□□□□ -2
RPRD1AQ96P16 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC2.58□□□□□ -2
RPRD1AQ96P16 AC090616.3-201ENST00000582184 217 ntBASIC2.58□□□□□ -2
RPRD1AQ96P16 HMGN2P15-201ENST00000585707 270 ntBASIC2.58□□□□□ -2
RPRD1AQ96P16 UBE2L4-201ENST00000587688 464 ntBASIC2.58□□□□□ -2
RPRD1AQ96P16 AL160237.3-201ENST00000604114 1013 ntBASIC2.58□□□□□ -2
RPRD1AQ96P16 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC2.58□□□□□ -2
RPRD1AQ96P16 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.58□□□□□ -2
RPRD1AQ96P16 AC006386.1-201ENST00000619436 415 ntBASIC2.58□□□□□ -2
RPRD1AQ96P16 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.58□□□□□ -2
RPRD1AQ96P16 AL158801.5-201ENST00000623123 465 ntBASIC2.58□□□□□ -2
RPRD1AQ96P16 MTND1P37-201ENST00000636562 264 ntBASIC2.58□□□□□ -2
RPRD1AQ96P16 AP003399.1-201ENST00000637534 361 ntBASIC2.58□□□□□ -2
RPRD1AQ96P16 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.58□□□□□ -2
RPRD1AQ96P16 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
RPRD1AQ96P16 AL359693.1-201ENST00000614959 2407 ntBASIC2.58□□□□□ -2
RPRD1AQ96P16 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
RPRD1AQ96P16 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.57□□□□□ -2
RPRD1AQ96P16 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.57□□□□□ -2
RPRD1AQ96P16 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
RPRD1AQ96P16 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC2.57□□□□□ -2
RPRD1AQ96P16 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
RPRD1AQ96P16 SNORA67.1-201ENST00000364749 141 ntBASIC2.57□□□□□ -2
RPRD1AQ96P16 RNU6-754P-201ENST00000391166 107 ntBASIC2.57□□□□□ -2
RPRD1AQ96P16 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.57□□□□□ -2
RPRD1AQ96P16 AL451054.2-201ENST00000420896 202 ntBASIC2.57□□□□□ -2
RPRD1AQ96P16 AL358075.3-201ENST00000426289 226 ntBASIC2.57□□□□□ -2
RPRD1AQ96P16 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.57□□□□□ -2
RPRD1AQ96P16 FGF7P5-201ENST00000441829 291 ntBASIC2.57□□□□□ -2
RPRD1AQ96P16 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.57□□□□□ -2
RPRD1AQ96P16 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC2.57□□□□□ -2
RPRD1AQ96P16 AC104389.3-201ENST00000445629 235 ntBASIC2.57□□□□□ -2
RPRD1AQ96P16 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC2.57□□□□□ -2
RPRD1AQ96P16 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.57□□□□□ -2
RPRD1AQ96P16 ST13P20-201ENST00000447996 1065 ntBASIC2.57□□□□□ -2
RPRD1AQ96P16 USP9YP10-201ENST00000454868 628 ntBASIC2.57□□□□□ -2
RPRD1AQ96P16 RPS20P22-201ENST00000473700 357 ntBASIC2.57□□□□□ -2
RPRD1AQ96P16 RPL23AP45-201ENST00000476406 468 ntBASIC2.57□□□□□ -2
RPRD1AQ96P16 RPS15AP34-201ENST00000487776 387 ntBASIC2.57□□□□□ -2
RPRD1AQ96P16 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.57□□□□□ -2
RPRD1AQ96P16 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.57□□□□□ -2
RPRD1AQ96P16 MRPS36P2-201ENST00000512569 299 ntBASIC2.57□□□□□ -2
RPRD1AQ96P16 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.57□□□□□ -2
RPRD1AQ96P16 RNU1-104P-201ENST00000517280 175 ntBASIC2.57□□□□□ -2
RPRD1AQ96P16 RPL7P20-201ENST00000520308 745 ntBASIC2.57□□□□□ -2
RPRD1AQ96P16 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.57□□□□□ -2
RPRD1AQ96P16 AP001646.1-201ENST00000527936 915 ntBASIC2.57□□□□□ -2
RPRD1AQ96P16 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.57□□□□□ -2
RPRD1AQ96P16 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.57□□□□□ -2
RPRD1AQ96P16 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC2.57□□□□□ -2
RPRD1AQ96P16 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.57□□□□□ -2
RPRD1AQ96P16 AC027176.1-201ENST00000560204 514 ntBASIC2.57□□□□□ -2
RPRD1AQ96P16 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.57□□□□□ -2
RPRD1AQ96P16 OR1M4P-201ENST00000589199 287 ntBASIC2.57□□□□□ -2
RPRD1AQ96P16 AL356575.1-201ENST00000603008 283 ntBASIC2.57□□□□□ -2
RPRD1AQ96P16 AL161729.4-201ENST00000604650 476 ntBASIC2.57□□□□□ -2
RPRD1AQ96P16 AC104237.2-201ENST00000612456 443 ntBASIC2.57□□□□□ -2
RPRD1AQ96P16 TUG1_2.1-201ENST00000614234 87 ntBASIC2.57□□□□□ -2
RPRD1AQ96P16 AC010133.1-201ENST00000615809 842 ntBASIC2.57□□□□□ -2
RPRD1AQ96P16 AC009269.6-201ENST00000621778 588 ntBASIC2.57□□□□□ -2
RPRD1AQ96P16 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.57□□□□□ -2
RPRD1AQ96P16 AC243829.7-201ENST00000633081 225 ntBASIC2.57□□□□□ -2
RPRD1AQ96P16 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.57□□□□□ -2
RPRD1AQ96P16 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.57□□□□□ -2
RPRD1AQ96P16 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.57□□□□□ -2
RPRD1AQ96P16 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
RPRD1AQ96P16 PABPC1P9-201ENST00000426076 1612 ntBASIC2.57□□□□□ -2
RPRD1AQ96P16 Z82209.1-201ENST00000422141 2135 ntBASIC2.56□□□□□ -2
RPRD1AQ96P16 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.56□□□□□ -2
RPRD1AQ96P16 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
RPRD1AQ96P16 MIR449A-201ENST00000362113 91 ntBASIC2.56□□□□□ -2
RPRD1AQ96P16 RNU6-461P-201ENST00000364195 107 ntBASIC2.56□□□□□ -2
RPRD1AQ96P16 SNORA68.1-201ENST00000364537 132 ntBASIC2.56□□□□□ -2
RPRD1AQ96P16 MIR518C-201ENST00000384822 101 ntBASIC2.56□□□□□ -2
RPRD1AQ96P16 U3.20-201ENST00000390909 217 ntBASIC2.56□□□□□ -2
RPRD1AQ96P16 AL590084.2-201ENST00000401481 382 ntBASIC2.56□□□□□ -2
RPRD1AQ96P16 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.56□□□□□ -2
RPRD1AQ96P16 MTND1P21-201ENST00000412991 285 ntBASIC2.56□□□□□ -2
RPRD1AQ96P16 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.56□□□□□ -2
RPRD1AQ96P16 AL513328.1-201ENST00000446460 224 ntBASIC2.56□□□□□ -2
RPRD1AQ96P16 snoU109.3-201ENST00000459477 145 ntBASIC2.56□□□□□ -2
RPRD1AQ96P16 AC135721.1-201ENST00000497954 479 ntBASIC2.56□□□□□ -2
RPRD1AQ96P16 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.56□□□□□ -2
RPRD1AQ96P16 RNA5SP82-201ENST00000516707 92 ntBASIC2.56□□□□□ -2
RPRD1AQ96P16 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms