Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
LINC00477Q96M19 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
LINC00477Q96M19 RNA5SP171-201ENST00000391071 115 ntBASIC2.08□□□□□ -2.08
LINC00477Q96M19 RNA5SP354-201ENST00000391247 136 ntBASIC2.08□□□□□ -2.08
LINC00477Q96M19 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.08□□□□□ -2.08
LINC00477Q96M19 AL021407.1-201ENST00000404531 386 ntBASIC2.08□□□□□ -2.08
LINC00477Q96M19 MIR320C1-201ENST00000408566 88 ntBASIC2.08□□□□□ -2.08
LINC00477Q96M19 RN7SKP266-201ENST00000410232 287 ntBASIC2.08□□□□□ -2.08
LINC00477Q96M19 RNU6-920P-201ENST00000410926 92 ntBASIC2.08□□□□□ -2.08
LINC00477Q96M19 AC009518.2-201ENST00000418056 731 ntBASIC2.08□□□□□ -2.08
LINC00477Q96M19 AC083875.1-201ENST00000419509 405 ntBASIC2.08□□□□□ -2.08
LINC00477Q96M19 RPL7L1P10-201ENST00000427790 463 ntBASIC2.08□□□□□ -2.08
LINC00477Q96M19 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.08□□□□□ -2.08
LINC00477Q96M19 AC129850.1-201ENST00000436203 508 ntBASIC2.08□□□□□ -2.08
LINC00477Q96M19 AL358232.1-201ENST00000448030 501 ntBASIC2.08□□□□□ -2.08
LINC00477Q96M19 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.08□□□□□ -2.08
LINC00477Q96M19 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
LINC00477Q96M19 BZW1P2-201ENST00000473537 826 ntBASIC2.08□□□□□ -2.08
LINC00477Q96M19 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.08□□□□□ -2.08
LINC00477Q96M19 RN7SL297P-201ENST00000483161 293 ntBASIC2.08□□□□□ -2.08
LINC00477Q96M19 AC021382.1-201ENST00000483523 359 ntBASIC2.08□□□□□ -2.08
LINC00477Q96M19 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC2.08□□□□□ -2.08
LINC00477Q96M19 RPL37P25-201ENST00000507308 276 ntBASIC2.08□□□□□ -2.08
LINC00477Q96M19 RNA5SP367-201ENST00000516557 118 ntBASIC2.08□□□□□ -2.08
LINC00477Q96M19 RNU6-826P-201ENST00000516827 104 ntBASIC2.08□□□□□ -2.08
LINC00477Q96M19 RN7SKP57-201ENST00000517248 293 ntBASIC2.08□□□□□ -2.08
LINC00477Q96M19 AC109329.2-201ENST00000519658 482 ntBASIC2.08□□□□□ -2.08
LINC00477Q96M19 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.08□□□□□ -2.08
LINC00477Q96M19 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC2.08□□□□□ -2.08
LINC00477Q96M19 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.08□□□□□ -2.08
LINC00477Q96M19 AP004247.1-201ENST00000531556 1289 ntBASIC2.08□□□□□ -2.08
LINC00477Q96M19 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.08□□□□□ -2.08
LINC00477Q96M19 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.08□□□□□ -2.08
LINC00477Q96M19 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.08□□□□□ -2.08
LINC00477Q96M19 HMGB1P6-201ENST00000569046 646 ntBASIC2.08□□□□□ -2.08
LINC00477Q96M19 AC090616.2-202ENST00000584248 222 ntBASIC2.08□□□□□ -2.08
LINC00477Q96M19 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.08□□□□□ -2.08
LINC00477Q96M19 AC024153.1-201ENST00000603103 365 ntBASIC2.08□□□□□ -2.08
LINC00477Q96M19 AL022161.1-201ENST00000604390 213 ntBASIC2.08□□□□□ -2.08
LINC00477Q96M19 AL031176.1-201ENST00000604554 466 ntBASIC2.08□□□□□ -2.08
LINC00477Q96M19 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.08□□□□□ -2.08
LINC00477Q96M19 AC105129.3-201ENST00000605455 485 ntBASIC2.08□□□□□ -2.08
LINC00477Q96M19 AL158211.4-201ENST00000606988 584 ntBASIC2.08□□□□□ -2.08
LINC00477Q96M19 MIR92B-201ENST00000607575 96 ntBASIC2.08□□□□□ -2.08
LINC00477Q96M19 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC2.08□□□□□ -2.08
LINC00477Q96M19 AC005046.1-201ENST00000608515 625 ntBASIC2.08□□□□□ -2.08
LINC00477Q96M19 AL392048.1-201ENST00000613946 534 ntBASIC2.08□□□□□ -2.08
LINC00477Q96M19 AC008443.7-201ENST00000622195 246 ntBASIC2.08□□□□□ -2.08
LINC00477Q96M19 AC112204.3-201ENST00000623822 332 ntBASIC2.08□□□□□ -2.08
LINC00477Q96M19 CR381653.2-201ENST00000624041 768 ntBASIC2.08□□□□□ -2.08
LINC00477Q96M19 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.08□□□□□ -2.08
LINC00477Q96M19 AC008568.2-201ENST00000623862 2313 ntBASIC2.08□□□□□ -2.08
LINC00477Q96M19 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
LINC00477Q96M19 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.08□□□□□ -2.08
LINC00477Q96M19 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.08□□□□□ -2.08
LINC00477Q96M19 CR848007.1-201ENST00000442354 1699 ntBASIC2.07□□□□□ -2.08
LINC00477Q96M19 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.07□□□□□ -2.08
LINC00477Q96M19 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
LINC00477Q96M19 RNU6-198P-201ENST00000384258 104 ntBASIC2.07□□□□□ -2.08
LINC00477Q96M19 RNU6-809P-201ENST00000384461 107 ntBASIC2.07□□□□□ -2.08
LINC00477Q96M19 RNU6-253P-201ENST00000384730 105 ntBASIC2.07□□□□□ -2.08
LINC00477Q96M19 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
LINC00477Q96M19 U8.14-201ENST00000390843 143 ntBASIC2.07□□□□□ -2.08
LINC00477Q96M19 RNU2-43P-201ENST00000410306 190 ntBASIC2.07□□□□□ -2.08
LINC00477Q96M19 MTCO1P17-201ENST00000411522 491 ntBASIC2.07□□□□□ -2.08
LINC00477Q96M19 AC007064.1-201ENST00000412238 351 ntBASIC2.07□□□□□ -2.08
LINC00477Q96M19 HMGB1P11-201ENST00000413899 637 ntBASIC2.07□□□□□ -2.08
LINC00477Q96M19 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.07□□□□□ -2.08
LINC00477Q96M19 AL365184.2-201ENST00000431139 435 ntBASIC2.07□□□□□ -2.08
LINC00477Q96M19 AC093156.1-201ENST00000440382 670 ntBASIC2.07□□□□□ -2.08
LINC00477Q96M19 RPL7P36-201ENST00000444633 681 ntBASIC2.07□□□□□ -2.08
LINC00477Q96M19 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.07□□□□□ -2.08
LINC00477Q96M19 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.07□□□□□ -2.08
LINC00477Q96M19 AP000852.1-201ENST00000472460 573 ntBASIC2.07□□□□□ -2.08
LINC00477Q96M19 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.07□□□□□ -2.08
LINC00477Q96M19 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC2.07□□□□□ -2.08
LINC00477Q96M19 RNU6-798P-201ENST00000516912 103 ntBASIC2.07□□□□□ -2.08
LINC00477Q96M19 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.07□□□□□ -2.08
LINC00477Q96M19 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.07□□□□□ -2.08
LINC00477Q96M19 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.07□□□□□ -2.08
LINC00477Q96M19 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
LINC00477Q96M19 AC007834.2-201ENST00000536310 343 ntBASIC2.07□□□□□ -2.08
LINC00477Q96M19 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
LINC00477Q96M19 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.07□□□□□ -2.08
LINC00477Q96M19 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.07□□□□□ -2.08
LINC00477Q96M19 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.07□□□□□ -2.08
LINC00477Q96M19 AC090615.1-201ENST00000577519 154 ntBASIC2.07□□□□□ -2.08
LINC00477Q96M19 AC060771.1-201ENST00000582031 164 ntBASIC2.07□□□□□ -2.08
LINC00477Q96M19 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC2.07□□□□□ -2.08
LINC00477Q96M19 MTCYBP22-201ENST00000603788 447 ntBASIC2.07□□□□□ -2.08
LINC00477Q96M19 AC025811.1-201ENST00000604312 472 ntBASIC2.07□□□□□ -2.08
LINC00477Q96M19 AL031775.1-201ENST00000607014 887 ntBASIC2.07□□□□□ -2.08
LINC00477Q96M19 AC079416.3-201ENST00000624479 549 ntBASIC2.07□□□□□ -2.08
LINC00477Q96M19 OR8B1P-202ENST00000641132 1178 ntBASIC2.07□□□□□ -2.08
LINC00477Q96M19 ASNSP3-201ENST00000451989 1306 ntBASIC2.07□□□□□ -2.08
LINC00477Q96M19 AL445523.1-201ENST00000451184 1362 ntBASIC2.07□□□□□ -2.08
LINC00477Q96M19 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
LINC00477Q96M19 AL137003.2-201ENST00000606924 2538 ntBASIC2.07□□□□□ -2.08
LINC00477Q96M19 TAB3P1-202ENST00000452645 1634 ntBASIC2.06□□□□□ -2.08
LINC00477Q96M19 AC092447.10-201ENST00000620607 1652 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 136.7 ms