Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.78□□□□□ -1.8
VPS50Q96JG6 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.78□□□□□ -1.8
VPS50Q96JG6 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.78□□□□□ -1.8
VPS50Q96JG6 SNORA71B-202ENST00000439232 272 ntBASIC3.78□□□□□ -1.8
VPS50Q96JG6 SEPT14P3-201ENST00000439401 183 ntBASIC3.78□□□□□ -1.8
VPS50Q96JG6 RPL26P6-201ENST00000440913 438 ntBASIC3.78□□□□□ -1.8
VPS50Q96JG6 AL732372.2-207ENST00000445840 183 ntBASIC3.78□□□□□ -1.8
VPS50Q96JG6 SEPT14P2-201ENST00000453405 183 ntBASIC3.78□□□□□ -1.8
VPS50Q96JG6 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.78□□□□□ -1.8
VPS50Q96JG6 HMGN2P16-201ENST00000456802 261 ntBASIC3.78□□□□□ -1.8
VPS50Q96JG6 MRPS17P3-201ENST00000465453 385 ntBASIC3.78□□□□□ -1.8
VPS50Q96JG6 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
VPS50Q96JG6 AP002812.1-201ENST00000495378 474 ntBASIC3.78□□□□□ -1.8
VPS50Q96JG6 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.78□□□□□ -1.8
VPS50Q96JG6 AC116562.3-201ENST00000506136 177 ntBASIC3.78□□□□□ -1.8
VPS50Q96JG6 PCBP2P3-201ENST00000509726 843 ntBASIC3.78□□□□□ -1.8
VPS50Q96JG6 SEPT14P4-201ENST00000513445 186 ntBASIC3.78□□□□□ -1.8
VPS50Q96JG6 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC3.78□□□□□ -1.8
VPS50Q96JG6 FO082796.1-201ENST00000523795 183 ntBASIC3.78□□□□□ -1.8
VPS50Q96JG6 AC068587.5-201ENST00000528506 175 ntBASIC3.78□□□□□ -1.8
VPS50Q96JG6 AC109635.4-202ENST00000531666 412 ntBASIC3.78□□□□□ -1.8
VPS50Q96JG6 OR5B10P-201ENST00000532869 642 ntBASIC3.78□□□□□ -1.8
VPS50Q96JG6 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.78□□□□□ -1.8
VPS50Q96JG6 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.78□□□□□ -1.8
VPS50Q96JG6 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.78□□□□□ -1.8
VPS50Q96JG6 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.78□□□□□ -1.8
VPS50Q96JG6 AC055876.1-202ENST00000567053 138 ntBASIC3.78□□□□□ -1.8
VPS50Q96JG6 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.78□□□□□ -1.8
VPS50Q96JG6 AC005951.2-201ENST00000576282 495 ntBASIC3.78□□□□□ -1.8
VPS50Q96JG6 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.78□□□□□ -1.8
VPS50Q96JG6 AC060780.3-201ENST00000589464 80 ntBASIC3.78□□□□□ -1.8
VPS50Q96JG6 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.78□□□□□ -1.8
VPS50Q96JG6 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
VPS50Q96JG6 SNHG22-203ENST00000617833 660 ntBASIC3.78□□□□□ -1.8
VPS50Q96JG6 AL008636.1-201ENST00000625038 1018 ntBASIC3.78□□□□□ -1.8
VPS50Q96JG6 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
VPS50Q96JG6 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
VPS50Q96JG6 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
VPS50Q96JG6 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.78□□□□□ -1.8
VPS50Q96JG6 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.78□□□□□ -1.8
VPS50Q96JG6 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
VPS50Q96JG6 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
VPS50Q96JG6 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
VPS50Q96JG6 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.77□□□□□ -1.81
VPS50Q96JG6 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
VPS50Q96JG6 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
VPS50Q96JG6 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
VPS50Q96JG6 RNU6-606P-201ENST00000384721 111 ntBASIC3.77□□□□□ -1.81
VPS50Q96JG6 MIR184-201ENST00000384962 84 ntBASIC3.77□□□□□ -1.81
VPS50Q96JG6 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
VPS50Q96JG6 EI24P2-201ENST00000397776 1076 ntBASIC3.77□□□□□ -1.81
VPS50Q96JG6 AC110754.1-201ENST00000399740 601 ntBASIC3.77□□□□□ -1.81
VPS50Q96JG6 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.77□□□□□ -1.81
VPS50Q96JG6 MTCO1P39-201ENST00000426148 480 ntBASIC3.77□□□□□ -1.81
VPS50Q96JG6 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.77□□□□□ -1.81
VPS50Q96JG6 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.77□□□□□ -1.81
VPS50Q96JG6 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.77□□□□□ -1.81
VPS50Q96JG6 AC024082.2-201ENST00000434771 238 ntBASIC3.77□□□□□ -1.81
VPS50Q96JG6 MTCO3P18-201ENST00000440206 761 ntBASIC3.77□□□□□ -1.81
VPS50Q96JG6 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.77□□□□□ -1.81
VPS50Q96JG6 AL356010.1-201ENST00000456364 102 ntBASIC3.77□□□□□ -1.81
VPS50Q96JG6 RNU6-261P-201ENST00000459506 102 ntBASIC3.77□□□□□ -1.81
VPS50Q96JG6 HMGB3P15-201ENST00000507326 574 ntBASIC3.77□□□□□ -1.81
VPS50Q96JG6 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.77□□□□□ -1.81
VPS50Q96JG6 RNU6-390P-201ENST00000516259 103 ntBASIC3.77□□□□□ -1.81
VPS50Q96JG6 SNORA20.3-201ENST00000516880 132 ntBASIC3.77□□□□□ -1.81
VPS50Q96JG6 RNU6-1092P-201ENST00000516955 87 ntBASIC3.77□□□□□ -1.81
VPS50Q96JG6 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.77□□□□□ -1.81
VPS50Q96JG6 AC100870.1-201ENST00000522035 505 ntBASIC3.77□□□□□ -1.81
VPS50Q96JG6 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.77□□□□□ -1.81
VPS50Q96JG6 SYF2P1-201ENST00000550658 413 ntBASIC3.77□□□□□ -1.81
VPS50Q96JG6 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.77□□□□□ -1.81
VPS50Q96JG6 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.77□□□□□ -1.81
VPS50Q96JG6 AC022968.1-201ENST00000567372 442 ntBASIC3.77□□□□□ -1.81
VPS50Q96JG6 MIR4775-201ENST00000581168 75 ntBASIC3.77□□□□□ -1.81
VPS50Q96JG6 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.77□□□□□ -1.81
VPS50Q96JG6 XIST_intron.1-201ENST00000619444 68 ntBASIC3.77□□□□□ -1.81
VPS50Q96JG6 AC110801.1-201ENST00000623590 212 ntBASIC3.77□□□□□ -1.81
VPS50Q96JG6 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.77□□□□□ -1.81
VPS50Q96JG6 MIR7153-201ENST00000637758 57 ntBASIC3.77□□□□□ -1.81
VPS50Q96JG6 ZNF826P-207ENST00000622273 1910 ntBASIC3.77□□□□□ -1.81
VPS50Q96JG6 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
VPS50Q96JG6 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.77□□□□□ -1.81
VPS50Q96JG6 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
VPS50Q96JG6 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
VPS50Q96JG6 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
VPS50Q96JG6 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
VPS50Q96JG6 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
VPS50Q96JG6 AC009812.4-201ENST00000569134 1805 ntBASIC3.77□□□□□ -1.81
VPS50Q96JG6 AL672296.1-201ENST00000427780 2158 ntBASIC3.76□□□□□ -1.81
VPS50Q96JG6 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
VPS50Q96JG6 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.76□□□□□ -1.81
VPS50Q96JG6 AL353746.1-201ENST00000566293 6881 ntBASIC3.76□□□□□ -1.81
VPS50Q96JG6 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.76□□□□□ -1.81
VPS50Q96JG6 RNU6-1284P-201ENST00000363701 100 ntBASIC3.76□□□□□ -1.81
VPS50Q96JG6 RNU6-996P-201ENST00000365438 107 ntBASIC3.76□□□□□ -1.81
VPS50Q96JG6 SMIM11P1-201ENST00000369586 178 ntBASIC3.76□□□□□ -1.81
VPS50Q96JG6 RNU6-701P-201ENST00000384059 107 ntBASIC3.76□□□□□ -1.81
VPS50Q96JG6 RNU6-76P-201ENST00000384060 104 ntBASIC3.76□□□□□ -1.81
VPS50Q96JG6 SNORA24.1-201ENST00000384401 135 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 126.8 ms