Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.13□□□□□ -1.75
CDK5RAP3Q96JB5 AC055876.1-202ENST00000567053 138 ntBASIC4.13□□□□□ -1.75
CDK5RAP3Q96JB5 MTCO3P24-201ENST00000572729 782 ntBASIC4.13□□□□□ -1.75
CDK5RAP3Q96JB5 AL162413.1-201ENST00000603198 110 ntBASIC4.13□□□□□ -1.75
CDK5RAP3Q96JB5 AL670379.6-201ENST00000603753 252 ntBASIC4.13□□□□□ -1.75
CDK5RAP3Q96JB5 AL670379.11-201ENST00000604059 253 ntBASIC4.13□□□□□ -1.75
CDK5RAP3Q96JB5 AC008162.1-201ENST00000604718 254 ntBASIC4.13□□□□□ -1.75
CDK5RAP3Q96JB5 AL670379.1-201ENST00000604752 252 ntBASIC4.13□□□□□ -1.75
CDK5RAP3Q96JB5 AL670379.5-201ENST00000605253 252 ntBASIC4.13□□□□□ -1.75
CDK5RAP3Q96JB5 AL670379.12-201ENST00000605291 253 ntBASIC4.13□□□□□ -1.75
CDK5RAP3Q96JB5 AL670379.8-201ENST00000605353 252 ntBASIC4.13□□□□□ -1.75
CDK5RAP3Q96JB5 AL670379.7-201ENST00000605823 252 ntBASIC4.13□□□□□ -1.75
CDK5RAP3Q96JB5 AC010133.1-201ENST00000615809 842 ntBASIC4.13□□□□□ -1.75
CDK5RAP3Q96JB5 AL589994.2-201ENST00000621124 579 ntBASIC4.13□□□□□ -1.75
CDK5RAP3Q96JB5 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
CDK5RAP3Q96JB5 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CDK5RAP3Q96JB5 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.13□□□□□ -1.75
CDK5RAP3Q96JB5 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
CDK5RAP3Q96JB5 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CDK5RAP3Q96JB5 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
CDK5RAP3Q96JB5 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.12□□□□□ -1.75
CDK5RAP3Q96JB5 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.12□□□□□ -1.75
CDK5RAP3Q96JB5 RNU6-960P-201ENST00000364056 120 ntBASIC4.12□□□□□ -1.75
CDK5RAP3Q96JB5 RNU4-48P-201ENST00000365559 182 ntBASIC4.12□□□□□ -1.75
CDK5RAP3Q96JB5 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
CDK5RAP3Q96JB5 RNU6-701P-201ENST00000384059 107 ntBASIC4.12□□□□□ -1.75
CDK5RAP3Q96JB5 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CDK5RAP3Q96JB5 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC4.12□□□□□ -1.75
CDK5RAP3Q96JB5 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC4.12□□□□□ -1.75
CDK5RAP3Q96JB5 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC4.12□□□□□ -1.75
CDK5RAP3Q96JB5 NDUFB1P1-201ENST00000435191 180 ntBASIC4.12□□□□□ -1.75
CDK5RAP3Q96JB5 MTND4P18-201ENST00000447010 465 ntBASIC4.12□□□□□ -1.75
CDK5RAP3Q96JB5 U3.44-201ENST00000458938 192 ntBASIC4.12□□□□□ -1.75
CDK5RAP3Q96JB5 RPS23P3-201ENST00000470993 430 ntBASIC4.12□□□□□ -1.75
CDK5RAP3Q96JB5 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
CDK5RAP3Q96JB5 AC116353.2-201ENST00000505332 712 ntBASIC4.12□□□□□ -1.75
CDK5RAP3Q96JB5 PRDX4P1-201ENST00000507189 574 ntBASIC4.12□□□□□ -1.75
CDK5RAP3Q96JB5 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC4.12□□□□□ -1.75
CDK5RAP3Q96JB5 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC4.12□□□□□ -1.75
CDK5RAP3Q96JB5 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.12□□□□□ -1.75
CDK5RAP3Q96JB5 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC4.12□□□□□ -1.75
CDK5RAP3Q96JB5 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC4.12□□□□□ -1.75
CDK5RAP3Q96JB5 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.12□□□□□ -1.75
CDK5RAP3Q96JB5 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC4.12□□□□□ -1.75
CDK5RAP3Q96JB5 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.12□□□□□ -1.75
CDK5RAP3Q96JB5 AC005951.2-201ENST00000576282 495 ntBASIC4.12□□□□□ -1.75
CDK5RAP3Q96JB5 AC002553.4-201ENST00000616896 331 ntBASIC4.12□□□□□ -1.75
CDK5RAP3Q96JB5 AC093648.1-201ENST00000623546 606 ntBASIC4.12□□□□□ -1.75
CDK5RAP3Q96JB5 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC4.12□□□□□ -1.75
CDK5RAP3Q96JB5 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC4.12□□□□□ -1.75
CDK5RAP3Q96JB5 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CDK5RAP3Q96JB5 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CDK5RAP3Q96JB5 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CDK5RAP3Q96JB5 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CDK5RAP3Q96JB5 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.11□□□□□ -1.75
CDK5RAP3Q96JB5 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC4.11□□□□□ -1.75
CDK5RAP3Q96JB5 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CDK5RAP3Q96JB5 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CDK5RAP3Q96JB5 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CDK5RAP3Q96JB5 Y_RNA.38-201ENST00000362617 102 ntBASIC4.11□□□□□ -1.75
CDK5RAP3Q96JB5 RNU5A-1-201ENST00000362698 116 ntBASIC4.11□□□□□ -1.75
CDK5RAP3Q96JB5 SNORA62.1-201ENST00000364287 154 ntBASIC4.11□□□□□ -1.75
CDK5RAP3Q96JB5 RNU6-534P-201ENST00000364877 106 ntBASIC4.11□□□□□ -1.75
CDK5RAP3Q96JB5 RNU6-877P-201ENST00000383868 107 ntBASIC4.11□□□□□ -1.75
CDK5RAP3Q96JB5 SNORA36C-201ENST00000384289 132 ntBASIC4.11□□□□□ -1.75
CDK5RAP3Q96JB5 RNU6-606P-201ENST00000384721 111 ntBASIC4.11□□□□□ -1.75
CDK5RAP3Q96JB5 MIR454-201ENST00000390180 115 ntBASIC4.11□□□□□ -1.75
CDK5RAP3Q96JB5 NDUFS5P1-201ENST00000405668 289 ntBASIC4.11□□□□□ -1.75
CDK5RAP3Q96JB5 RHEBP3-201ENST00000411920 351 ntBASIC4.11□□□□□ -1.75
CDK5RAP3Q96JB5 USP9YP6-201ENST00000413550 854 ntBASIC4.11□□□□□ -1.75
CDK5RAP3Q96JB5 OR51A5P-201ENST00000415429 942 ntBASIC4.11□□□□□ -1.75
CDK5RAP3Q96JB5 AC114491.1-201ENST00000416095 246 ntBASIC4.11□□□□□ -1.75
CDK5RAP3Q96JB5 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.11□□□□□ -1.75
CDK5RAP3Q96JB5 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC4.11□□□□□ -1.75
CDK5RAP3Q96JB5 SETP5-201ENST00000437270 562 ntBASIC4.11□□□□□ -1.75
CDK5RAP3Q96JB5 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC4.11□□□□□ -1.75
CDK5RAP3Q96JB5 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC4.11□□□□□ -1.75
CDK5RAP3Q96JB5 DDX3P2-201ENST00000446138 111 ntBASIC4.11□□□□□ -1.75
CDK5RAP3Q96JB5 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC4.11□□□□□ -1.75
CDK5RAP3Q96JB5 RN7SL330P-201ENST00000469709 307 ntBASIC4.11□□□□□ -1.75
CDK5RAP3Q96JB5 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CDK5RAP3Q96JB5 HSPE1P6-201ENST00000479457 291 ntBASIC4.11□□□□□ -1.75
CDK5RAP3Q96JB5 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.11□□□□□ -1.75
CDK5RAP3Q96JB5 AC026402.1-201ENST00000513642 170 ntBASIC4.11□□□□□ -1.75
CDK5RAP3Q96JB5 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC4.11□□□□□ -1.75
CDK5RAP3Q96JB5 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.11□□□□□ -1.75
CDK5RAP3Q96JB5 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC4.11□□□□□ -1.75
CDK5RAP3Q96JB5 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.11□□□□□ -1.75
CDK5RAP3Q96JB5 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC4.11□□□□□ -1.75
CDK5RAP3Q96JB5 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.11□□□□□ -1.75
CDK5RAP3Q96JB5 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CDK5RAP3Q96JB5 AL110115.1-201ENST00000614396 364 ntBASIC4.11□□□□□ -1.75
CDK5RAP3Q96JB5 AL354950.2-201ENST00000617939 290 ntBASIC4.11□□□□□ -1.75
CDK5RAP3Q96JB5 AF117829.1-206ENST00000621883 3802 ntBASIC4.11□□□□□ -1.75
CDK5RAP3Q96JB5 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CDK5RAP3Q96JB5 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.11□□□□□ -1.75
CDK5RAP3Q96JB5 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CDK5RAP3Q96JB5 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CDK5RAP3Q96JB5 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CDK5RAP3Q96JB5 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms