Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 ELF2P3-201ENST00000445099 1506 ntBASIC3.02□□□□□ -1.93
VMP1Q96GC9 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.02□□□□□ -1.93
VMP1Q96GC9 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
VMP1Q96GC9 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
VMP1Q96GC9 AC006378.2-201ENST00000623178 2476 ntBASIC3.01□□□□□ -1.93
VMP1Q96GC9 RNY4P24-201ENST00000362735 96 ntBASIC3.01□□□□□ -1.93
VMP1Q96GC9 RNU6-778P-201ENST00000363269 103 ntBASIC3.01□□□□□ -1.93
VMP1Q96GC9 RNU6-253P-201ENST00000384730 105 ntBASIC3.01□□□□□ -1.93
VMP1Q96GC9 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.01□□□□□ -1.93
VMP1Q96GC9 AL139397.2-201ENST00000404529 772 ntBASIC3.01□□□□□ -1.93
VMP1Q96GC9 RNA5SP229-201ENST00000410809 99 ntBASIC3.01□□□□□ -1.93
VMP1Q96GC9 RPL26P27-201ENST00000414397 437 ntBASIC3.01□□□□□ -1.93
VMP1Q96GC9 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.01□□□□□ -1.93
VMP1Q96GC9 SKA2P1-201ENST00000425592 390 ntBASIC3.01□□□□□ -1.93
VMP1Q96GC9 SUMO1P4-201ENST00000429430 302 ntBASIC3.01□□□□□ -1.93
VMP1Q96GC9 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC3.01□□□□□ -1.93
VMP1Q96GC9 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.01□□□□□ -1.93
VMP1Q96GC9 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.01□□□□□ -1.93
VMP1Q96GC9 RPL39P40-201ENST00000445481 146 ntBASIC3.01□□□□□ -1.93
VMP1Q96GC9 RPL37P4-201ENST00000448908 268 ntBASIC3.01□□□□□ -1.93
VMP1Q96GC9 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC3.01□□□□□ -1.93
VMP1Q96GC9 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.01□□□□□ -1.93
VMP1Q96GC9 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC3.01□□□□□ -1.93
VMP1Q96GC9 EIF4EP3-201ENST00000498782 656 ntBASIC3.01□□□□□ -1.93
VMP1Q96GC9 RPF2P2-201ENST00000504693 896 ntBASIC3.01□□□□□ -1.93
VMP1Q96GC9 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.01□□□□□ -1.93
VMP1Q96GC9 AC034244.1-201ENST00000507687 207 ntBASIC3.01□□□□□ -1.93
VMP1Q96GC9 AC098591.2-201ENST00000510152 315 ntBASIC3.01□□□□□ -1.93
VMP1Q96GC9 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.01□□□□□ -1.93
VMP1Q96GC9 AC022447.1-201ENST00000515358 464 ntBASIC3.01□□□□□ -1.93
VMP1Q96GC9 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.01□□□□□ -1.93
VMP1Q96GC9 RNU5F-8P-201ENST00000515941 111 ntBASIC3.01□□□□□ -1.93
VMP1Q96GC9 RNU1-103P-201ENST00000516502 125 ntBASIC3.01□□□□□ -1.93
VMP1Q96GC9 RNA5SP471-201ENST00000516971 106 ntBASIC3.01□□□□□ -1.93
VMP1Q96GC9 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.01□□□□□ -1.93
VMP1Q96GC9 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.01□□□□□ -1.93
VMP1Q96GC9 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.01□□□□□ -1.93
VMP1Q96GC9 RPL21P12-201ENST00000559810 515 ntBASIC3.01□□□□□ -1.93
VMP1Q96GC9 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.01□□□□□ -1.93
VMP1Q96GC9 AC006539.2-201ENST00000601729 572 ntBASIC3.01□□□□□ -1.93
VMP1Q96GC9 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.01□□□□□ -1.93
VMP1Q96GC9 AL355472.4-201ENST00000610233 626 ntBASIC3.01□□□□□ -1.93
VMP1Q96GC9 AC090970.3-201ENST00000612566 866 ntBASIC3.01□□□□□ -1.93
VMP1Q96GC9 AL442067.2-201ENST00000614033 363 ntBASIC3.01□□□□□ -1.93
VMP1Q96GC9 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.01□□□□□ -1.93
VMP1Q96GC9 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.01□□□□□ -1.93
VMP1Q96GC9 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
VMP1Q96GC9 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
VMP1Q96GC9 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
VMP1Q96GC9 AC010889.1-201ENST00000566193 2666 ntBASIC3.01□□□□□ -1.93
VMP1Q96GC9 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.01□□□□□ -1.93
VMP1Q96GC9 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3□□□□□ -1.93
VMP1Q96GC9 MTND4P16-201ENST00000466108 1367 ntBASIC3□□□□□ -1.93
VMP1Q96GC9 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
VMP1Q96GC9 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3□□□□□ -1.93
VMP1Q96GC9 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
VMP1Q96GC9 UBE2L2-201ENST00000254302 429 ntBASIC3□□□□□ -1.93
VMP1Q96GC9 Y_RNA.302-201ENST00000364997 102 ntBASIC3□□□□□ -1.93
VMP1Q96GC9 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3□□□□□ -1.93
VMP1Q96GC9 UBE2Q2P12-201ENST00000414573 204 ntBASIC3□□□□□ -1.93
VMP1Q96GC9 DNAJA1P2-201ENST00000421360 1197 ntBASIC3□□□□□ -1.93
VMP1Q96GC9 AC104651.1-201ENST00000427559 735 ntBASIC3□□□□□ -1.93
VMP1Q96GC9 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3□□□□□ -1.93
VMP1Q96GC9 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3□□□□□ -1.93
VMP1Q96GC9 MTND1P20-201ENST00000430341 950 ntBASIC3□□□□□ -1.93
VMP1Q96GC9 RPL23AP83-201ENST00000434984 473 ntBASIC3□□□□□ -1.93
VMP1Q96GC9 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3□□□□□ -1.93
VMP1Q96GC9 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3□□□□□ -1.93
VMP1Q96GC9 AC115115.1-201ENST00000449927 248 ntBASIC3□□□□□ -1.93
VMP1Q96GC9 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3□□□□□ -1.93
VMP1Q96GC9 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3□□□□□ -1.93
VMP1Q96GC9 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC3□□□□□ -1.93
VMP1Q96GC9 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3□□□□□ -1.93
VMP1Q96GC9 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC3□□□□□ -1.93
VMP1Q96GC9 AC007151.1-201ENST00000572774 483 ntBASIC3□□□□□ -1.93
VMP1Q96GC9 MIR4446-201ENST00000578505 67 ntBASIC3□□□□□ -1.93
VMP1Q96GC9 MIR5004-201ENST00000579078 107 ntBASIC3□□□□□ -1.93
VMP1Q96GC9 MIR3616-201ENST00000584070 92 ntBASIC3□□□□□ -1.93
VMP1Q96GC9 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3□□□□□ -1.93
VMP1Q96GC9 AC112187.2-201ENST00000604345 283 ntBASIC3□□□□□ -1.93
VMP1Q96GC9 AL161756.2-201ENST00000604597 246 ntBASIC3□□□□□ -1.93
VMP1Q96GC9 YPEL5P2-201ENST00000605553 359 ntBASIC3□□□□□ -1.93
VMP1Q96GC9 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3□□□□□ -1.93
VMP1Q96GC9 AC135507.1-201ENST00000607214 561 ntBASIC3□□□□□ -1.93
VMP1Q96GC9 AC107294.1-201ENST00000609524 467 ntBASIC3□□□□□ -1.93
VMP1Q96GC9 OR10AB1P-201ENST00000609613 938 ntBASIC3□□□□□ -1.93
VMP1Q96GC9 DUSP12P1-201ENST00000612874 516 ntBASIC3□□□□□ -1.93
VMP1Q96GC9 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3□□□□□ -1.93
VMP1Q96GC9 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
VMP1Q96GC9 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3□□□□□ -1.93
VMP1Q96GC9 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
VMP1Q96GC9 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
VMP1Q96GC9 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
VMP1Q96GC9 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC2.99□□□□□ -1.93
VMP1Q96GC9 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
VMP1Q96GC9 Y_RNA.18-201ENST00000362461 102 ntBASIC2.99□□□□□ -1.93
VMP1Q96GC9 RNU6-512P-201ENST00000364438 103 ntBASIC2.99□□□□□ -1.93
VMP1Q96GC9 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
VMP1Q96GC9 MIR491-201ENST00000384877 84 ntBASIC2.99□□□□□ -1.93
VMP1Q96GC9 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms