Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 AL159972.1-201ENST00000625150 448 ntBASIC2.36□□□□□ -2.03
ECHDC3Q96DC8 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.36□□□□□ -2.03
ECHDC3Q96DC8 AC010149.2-201ENST00000637608 315 ntBASIC2.36□□□□□ -2.03
ECHDC3Q96DC8 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.36□□□□□ -2.03
ECHDC3Q96DC8 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC2.36□□□□□ -2.03
ECHDC3Q96DC8 AC006020.1-201ENST00000420179 1854 ntBASIC2.35□□□□□ -2.03
ECHDC3Q96DC8 MIR6073-201ENST00000352083 89 ntBASIC2.35□□□□□ -2.03
ECHDC3Q96DC8 RNU6-1078P-201ENST00000364522 103 ntBASIC2.35□□□□□ -2.03
ECHDC3Q96DC8 RNU6-741P-201ENST00000383889 107 ntBASIC2.35□□□□□ -2.03
ECHDC3Q96DC8 RNU6-637P-201ENST00000384050 107 ntBASIC2.35□□□□□ -2.03
ECHDC3Q96DC8 Y_RNA.472-201ENST00000384322 102 ntBASIC2.35□□□□□ -2.03
ECHDC3Q96DC8 RNU6-754P-201ENST00000391166 107 ntBASIC2.35□□□□□ -2.03
ECHDC3Q96DC8 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.35□□□□□ -2.03
ECHDC3Q96DC8 RNU4-53P-201ENST00000410828 140 ntBASIC2.35□□□□□ -2.03
ECHDC3Q96DC8 AL449283.1-202ENST00000418249 604 ntBASIC2.35□□□□□ -2.03
ECHDC3Q96DC8 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC2.35□□□□□ -2.03
ECHDC3Q96DC8 GTF2IP20-201ENST00000431663 360 ntBASIC2.35□□□□□ -2.03
ECHDC3Q96DC8 AL049734.2-201ENST00000441066 616 ntBASIC2.35□□□□□ -2.03
ECHDC3Q96DC8 FGF7P5-201ENST00000441829 291 ntBASIC2.35□□□□□ -2.03
ECHDC3Q96DC8 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.35□□□□□ -2.03
ECHDC3Q96DC8 MTND1P31-201ENST00000449206 961 ntBASIC2.35□□□□□ -2.03
ECHDC3Q96DC8 AP1S2P1-201ENST00000457344 379 ntBASIC2.35□□□□□ -2.03
ECHDC3Q96DC8 AC090096.1-201ENST00000489168 390 ntBASIC2.35□□□□□ -2.03
ECHDC3Q96DC8 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.35□□□□□ -2.03
ECHDC3Q96DC8 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.35□□□□□ -2.03
ECHDC3Q96DC8 SNORA19.3-201ENST00000516165 130 ntBASIC2.35□□□□□ -2.03
ECHDC3Q96DC8 AL391261.3-201ENST00000557194 520 ntBASIC2.35□□□□□ -2.03
ECHDC3Q96DC8 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.35□□□□□ -2.03
ECHDC3Q96DC8 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.35□□□□□ -2.03
ECHDC3Q96DC8 AL590808.1-201ENST00000618696 141 ntBASIC2.35□□□□□ -2.03
ECHDC3Q96DC8 AC231657.1-201ENST00000624313 397 ntBASIC2.35□□□□□ -2.03
ECHDC3Q96DC8 ZNF271P-202ENST00000465539 1970 ntBASIC2.35□□□□□ -2.03
ECHDC3Q96DC8 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.35□□□□□ -2.03
ECHDC3Q96DC8 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
ECHDC3Q96DC8 ZNF658B-202ENST00000615961 3375 ntBASIC2.35□□□□□ -2.03
ECHDC3Q96DC8 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.35□□□□□ -2.03
ECHDC3Q96DC8 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
ECHDC3Q96DC8 AL161781.1-201ENST00000354277 403 ntBASIC2.34□□□□□ -2.03
ECHDC3Q96DC8 SNORA68.1-201ENST00000364537 132 ntBASIC2.34□□□□□ -2.03
ECHDC3Q96DC8 RNU6-1072P-201ENST00000384703 107 ntBASIC2.34□□□□□ -2.03
ECHDC3Q96DC8 RNU6-443P-201ENST00000384780 107 ntBASIC2.34□□□□□ -2.03
ECHDC3Q96DC8 RNU6-1000P-201ENST00000391066 106 ntBASIC2.34□□□□□ -2.03
ECHDC3Q96DC8 RPL23AP29-201ENST00000397284 453 ntBASIC2.34□□□□□ -2.03
ECHDC3Q96DC8 AL591416.1-201ENST00000404015 867 ntBASIC2.34□□□□□ -2.03
ECHDC3Q96DC8 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.34□□□□□ -2.03
ECHDC3Q96DC8 AL139413.1-201ENST00000421309 217 ntBASIC2.34□□□□□ -2.03
ECHDC3Q96DC8 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.34□□□□□ -2.03
ECHDC3Q96DC8 NANOGP2-201ENST00000435391 727 ntBASIC2.34□□□□□ -2.03
ECHDC3Q96DC8 AC018634.1-201ENST00000437554 401 ntBASIC2.34□□□□□ -2.03
ECHDC3Q96DC8 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.34□□□□□ -2.03
ECHDC3Q96DC8 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC2.34□□□□□ -2.03
ECHDC3Q96DC8 ZNF886P-201ENST00000450781 723 ntBASIC2.34□□□□□ -2.03
ECHDC3Q96DC8 RNU7-26P-201ENST00000458980 63 ntBASIC2.34□□□□□ -2.03
ECHDC3Q96DC8 RPS20P20-201ENST00000460498 340 ntBASIC2.34□□□□□ -2.03
ECHDC3Q96DC8 AC104982.1-201ENST00000478775 574 ntBASIC2.34□□□□□ -2.03
ECHDC3Q96DC8 AC021382.1-201ENST00000483523 359 ntBASIC2.34□□□□□ -2.03
ECHDC3Q96DC8 LINC00888-204ENST00000487386 421 ntBASIC2.34□□□□□ -2.03
ECHDC3Q96DC8 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC2.34□□□□□ -2.03
ECHDC3Q96DC8 HMGB3P3-201ENST00000510526 400 ntBASIC2.34□□□□□ -2.03
ECHDC3Q96DC8 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC2.34□□□□□ -2.03
ECHDC3Q96DC8 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.34□□□□□ -2.03
ECHDC3Q96DC8 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.34□□□□□ -2.03
ECHDC3Q96DC8 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.34□□□□□ -2.03
ECHDC3Q96DC8 MYL12BP1-201ENST00000569826 507 ntBASIC2.34□□□□□ -2.03
ECHDC3Q96DC8 MIR4658-201ENST00000584344 65 ntBASIC2.34□□□□□ -2.03
ECHDC3Q96DC8 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.34□□□□□ -2.03
ECHDC3Q96DC8 BBIP1P1-201ENST00000602999 279 ntBASIC2.34□□□□□ -2.03
ECHDC3Q96DC8 MTND1P37-201ENST00000636562 264 ntBASIC2.34□□□□□ -2.03
ECHDC3Q96DC8 AC106858.1-201ENST00000637497 429 ntBASIC2.34□□□□□ -2.03
ECHDC3Q96DC8 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.34□□□□□ -2.04
ECHDC3Q96DC8 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
ECHDC3Q96DC8 DDX43P2-201ENST00000604753 1354 ntBASIC2.34□□□□□ -2.04
ECHDC3Q96DC8 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.34□□□□□ -2.04
ECHDC3Q96DC8 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
ECHDC3Q96DC8 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
ECHDC3Q96DC8 RNU5E-10P-201ENST00000363506 118 ntBASIC2.33□□□□□ -2.04
ECHDC3Q96DC8 SNORD114-30-201ENST00000364448 72 ntBASIC2.33□□□□□ -2.04
ECHDC3Q96DC8 RNA5SP126-201ENST00000365092 109 ntBASIC2.33□□□□□ -2.04
ECHDC3Q96DC8 RNU6-1207P-201ENST00000384343 107 ntBASIC2.33□□□□□ -2.04
ECHDC3Q96DC8 RNA5SP181-201ENST00000410246 98 ntBASIC2.33□□□□□ -2.04
ECHDC3Q96DC8 AC007064.1-201ENST00000412238 351 ntBASIC2.33□□□□□ -2.04
ECHDC3Q96DC8 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
ECHDC3Q96DC8 AL953862.1-201ENST00000423016 168 ntBASIC2.33□□□□□ -2.04
ECHDC3Q96DC8 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.33□□□□□ -2.04
ECHDC3Q96DC8 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.33□□□□□ -2.04
ECHDC3Q96DC8 AC098614.2-201ENST00000426040 255 ntBASIC2.33□□□□□ -2.04
ECHDC3Q96DC8 AL035407.1-201ENST00000429211 571 ntBASIC2.33□□□□□ -2.04
ECHDC3Q96DC8 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.33□□□□□ -2.04
ECHDC3Q96DC8 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC2.33□□□□□ -2.04
ECHDC3Q96DC8 COX7BP2-201ENST00000437976 242 ntBASIC2.33□□□□□ -2.04
ECHDC3Q96DC8 AL358794.1-201ENST00000445689 381 ntBASIC2.33□□□□□ -2.04
ECHDC3Q96DC8 HIGD1AP2-201ENST00000446367 280 ntBASIC2.33□□□□□ -2.04
ECHDC3Q96DC8 MTND2P24-201ENST00000453434 806 ntBASIC2.33□□□□□ -2.04
ECHDC3Q96DC8 RPS20P22-201ENST00000473700 357 ntBASIC2.33□□□□□ -2.04
ECHDC3Q96DC8 AC138853.1-201ENST00000503549 823 ntBASIC2.33□□□□□ -2.04
ECHDC3Q96DC8 AC010486.1-201ENST00000511793 424 ntBASIC2.33□□□□□ -2.04
ECHDC3Q96DC8 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.33□□□□□ -2.04
ECHDC3Q96DC8 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC2.33□□□□□ -2.04
ECHDC3Q96DC8 RNU6-276P-201ENST00000516114 96 ntBASIC2.33□□□□□ -2.04
ECHDC3Q96DC8 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms