Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 DDX3P2-201ENST00000446138 111 ntBASIC3.98□□□□□ -1.77
TRIM43Q96BQ3 AL671855.1-201ENST00000446875 1203 ntBASIC3.98□□□□□ -1.77
TRIM43Q96BQ3 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC3.98□□□□□ -1.77
TRIM43Q96BQ3 RPL31P58-201ENST00000469001 379 ntBASIC3.98□□□□□ -1.77
TRIM43Q96BQ3 AC126389.1-201ENST00000477436 290 ntBASIC3.98□□□□□ -1.77
TRIM43Q96BQ3 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.98□□□□□ -1.77
TRIM43Q96BQ3 RPL36AP51-201ENST00000487216 318 ntBASIC3.98□□□□□ -1.77
TRIM43Q96BQ3 AC106872.2-201ENST00000494303 480 ntBASIC3.98□□□□□ -1.77
TRIM43Q96BQ3 RN7SL504P-201ENST00000494496 287 ntBASIC3.98□□□□□ -1.77
TRIM43Q96BQ3 AC116562.3-201ENST00000506136 177 ntBASIC3.98□□□□□ -1.77
TRIM43Q96BQ3 RNA5SP154-201ENST00000516193 111 ntBASIC3.98□□□□□ -1.77
TRIM43Q96BQ3 SNORD27.1-201ENST00000516319 72 ntBASIC3.98□□□□□ -1.77
TRIM43Q96BQ3 RN7SKP83-201ENST00000516512 178 ntBASIC3.98□□□□□ -1.77
TRIM43Q96BQ3 MTND1P35-201ENST00000526739 508 ntBASIC3.98□□□□□ -1.77
TRIM43Q96BQ3 AP001646.1-201ENST00000527936 915 ntBASIC3.98□□□□□ -1.77
TRIM43Q96BQ3 AC068587.5-201ENST00000528506 175 ntBASIC3.98□□□□□ -1.77
TRIM43Q96BQ3 AC008011.1-201ENST00000545989 227 ntBASIC3.98□□□□□ -1.77
TRIM43Q96BQ3 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.98□□□□□ -1.77
TRIM43Q96BQ3 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.98□□□□□ -1.77
TRIM43Q96BQ3 AC055876.1-202ENST00000567053 138 ntBASIC3.98□□□□□ -1.77
TRIM43Q96BQ3 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.98□□□□□ -1.77
TRIM43Q96BQ3 AC007687.1-201ENST00000602704 304 ntBASIC3.98□□□□□ -1.77
TRIM43Q96BQ3 AL162413.1-201ENST00000603198 110 ntBASIC3.98□□□□□ -1.77
TRIM43Q96BQ3 AL355810.1-201ENST00000614629 552 ntBASIC3.98□□□□□ -1.77
TRIM43Q96BQ3 AL589994.2-201ENST00000621124 579 ntBASIC3.98□□□□□ -1.77
TRIM43Q96BQ3 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.98□□□□□ -1.77
TRIM43Q96BQ3 AP000553.6-201ENST00000641242 118 ntBASIC3.98□□□□□ -1.77
TRIM43Q96BQ3 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.98□□□□□ -1.77
TRIM43Q96BQ3 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
TRIM43Q96BQ3 AC004520.1-201ENST00000608362 1413 ntBASIC3.97□□□□□ -1.77
TRIM43Q96BQ3 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.97□□□□□ -1.77
TRIM43Q96BQ3 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
TRIM43Q96BQ3 RNU6-960P-201ENST00000364056 120 ntBASIC3.97□□□□□ -1.77
TRIM43Q96BQ3 RNU6-606P-201ENST00000384721 111 ntBASIC3.97□□□□□ -1.77
TRIM43Q96BQ3 U3.19-201ENST00000390893 196 ntBASIC3.97□□□□□ -1.77
TRIM43Q96BQ3 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
TRIM43Q96BQ3 RNA5SP104-201ENST00000410989 118 ntBASIC3.97□□□□□ -1.77
TRIM43Q96BQ3 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.97□□□□□ -1.77
TRIM43Q96BQ3 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
TRIM43Q96BQ3 JKAMPP1-201ENST00000413804 919 ntBASIC3.97□□□□□ -1.77
TRIM43Q96BQ3 SDCBPP3-201ENST00000419629 891 ntBASIC3.97□□□□□ -1.77
TRIM43Q96BQ3 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.97□□□□□ -1.77
TRIM43Q96BQ3 MTND4LP11-201ENST00000422184 280 ntBASIC3.97□□□□□ -1.77
TRIM43Q96BQ3 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
TRIM43Q96BQ3 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC3.97□□□□□ -1.77
TRIM43Q96BQ3 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.97□□□□□ -1.77
TRIM43Q96BQ3 AL606489.2-201ENST00000433886 234 ntBASIC3.97□□□□□ -1.77
TRIM43Q96BQ3 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
TRIM43Q96BQ3 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.97□□□□□ -1.77
TRIM43Q96BQ3 RBMX2P4-201ENST00000441256 376 ntBASIC3.97□□□□□ -1.77
TRIM43Q96BQ3 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.97□□□□□ -1.77
TRIM43Q96BQ3 GAPDHP27-201ENST00000447427 1020 ntBASIC3.97□□□□□ -1.77
TRIM43Q96BQ3 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.97□□□□□ -1.77
TRIM43Q96BQ3 FDX1P2-201ENST00000450769 375 ntBASIC3.97□□□□□ -1.77
TRIM43Q96BQ3 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.97□□□□□ -1.77
TRIM43Q96BQ3 AC006512.1-201ENST00000468816 291 ntBASIC3.97□□□□□ -1.77
TRIM43Q96BQ3 AC083798.1-201ENST00000472671 131 ntBASIC3.97□□□□□ -1.77
TRIM43Q96BQ3 HSPE1P6-201ENST00000479457 291 ntBASIC3.97□□□□□ -1.77
TRIM43Q96BQ3 RPL31P13-201ENST00000484151 370 ntBASIC3.97□□□□□ -1.77
TRIM43Q96BQ3 RPL23AP55-201ENST00000498163 452 ntBASIC3.97□□□□□ -1.77
TRIM43Q96BQ3 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.97□□□□□ -1.77
TRIM43Q96BQ3 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.97□□□□□ -1.77
TRIM43Q96BQ3 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.97□□□□□ -1.77
TRIM43Q96BQ3 RPS3AP4-201ENST00000555161 764 ntBASIC3.97□□□□□ -1.77
TRIM43Q96BQ3 RPL23AP84-201ENST00000571193 464 ntBASIC3.97□□□□□ -1.77
TRIM43Q96BQ3 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.97□□□□□ -1.77
TRIM43Q96BQ3 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.97□□□□□ -1.77
TRIM43Q96BQ3 AC004696.1-201ENST00000614345 607 ntBASIC3.97□□□□□ -1.77
TRIM43Q96BQ3 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.97□□□□□ -1.77
TRIM43Q96BQ3 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.97□□□□□ -1.77
TRIM43Q96BQ3 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.97□□□□□ -1.77
TRIM43Q96BQ3 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
TRIM43Q96BQ3 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.97□□□□□ -1.77
TRIM43Q96BQ3 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.97□□□□□ -1.77
TRIM43Q96BQ3 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.77
TRIM43Q96BQ3 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.77
TRIM43Q96BQ3 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
TRIM43Q96BQ3 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
TRIM43Q96BQ3 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
TRIM43Q96BQ3 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.96□□□□□ -1.78
TRIM43Q96BQ3 DEFB108F-201ENST00000344638 222 ntBASIC3.96□□□□□ -1.78
TRIM43Q96BQ3 RNU6-179P-201ENST00000363350 107 ntBASIC3.96□□□□□ -1.78
TRIM43Q96BQ3 RNU6-188P-201ENST00000364207 107 ntBASIC3.96□□□□□ -1.78
TRIM43Q96BQ3 Y_RNA.381-201ENST00000365666 102 ntBASIC3.96□□□□□ -1.78
TRIM43Q96BQ3 MIR454-201ENST00000390180 115 ntBASIC3.96□□□□□ -1.78
TRIM43Q96BQ3 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
TRIM43Q96BQ3 NDUFS5P1-201ENST00000405668 289 ntBASIC3.96□□□□□ -1.78
TRIM43Q96BQ3 OR51A5P-201ENST00000415429 942 ntBASIC3.96□□□□□ -1.78
TRIM43Q96BQ3 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.96□□□□□ -1.78
TRIM43Q96BQ3 MTATP6P16-201ENST00000434543 526 ntBASIC3.96□□□□□ -1.78
TRIM43Q96BQ3 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.96□□□□□ -1.78
TRIM43Q96BQ3 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.96□□□□□ -1.78
TRIM43Q96BQ3 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.96□□□□□ -1.78
TRIM43Q96BQ3 AL356010.1-201ENST00000456364 102 ntBASIC3.96□□□□□ -1.78
TRIM43Q96BQ3 RNU6-420P-201ENST00000458780 107 ntBASIC3.96□□□□□ -1.78
TRIM43Q96BQ3 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.96□□□□□ -1.78
TRIM43Q96BQ3 AC092451.1-201ENST00000480211 153 ntBASIC3.96□□□□□ -1.78
TRIM43Q96BQ3 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.96□□□□□ -1.78
TRIM43Q96BQ3 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.96□□□□□ -1.78
TRIM43Q96BQ3 AP001086.1-201ENST00000494882 321 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms