Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 U8.12-201ENST00000384701 133 ntBASIC4.12□□□□□ -1.75
HPS3Q969F9 MIR200C-201ENST00000384980 68 ntBASIC4.12□□□□□ -1.75
HPS3Q969F9 RNA5SP171-201ENST00000391071 115 ntBASIC4.12□□□□□ -1.75
HPS3Q969F9 RNU6-1158P-201ENST00000391167 107 ntBASIC4.12□□□□□ -1.75
HPS3Q969F9 RNU6-387P-201ENST00000411331 105 ntBASIC4.12□□□□□ -1.75
HPS3Q969F9 CYCSP19-201ENST00000411715 316 ntBASIC4.12□□□□□ -1.75
HPS3Q969F9 AL513331.1-201ENST00000411908 397 ntBASIC4.12□□□□□ -1.75
HPS3Q969F9 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HPS3Q969F9 AC114491.1-201ENST00000416095 246 ntBASIC4.12□□□□□ -1.75
HPS3Q969F9 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC4.12□□□□□ -1.75
HPS3Q969F9 AL451054.2-201ENST00000420896 202 ntBASIC4.12□□□□□ -1.75
HPS3Q969F9 AL159169.1-201ENST00000421119 127 ntBASIC4.12□□□□□ -1.75
HPS3Q969F9 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.12□□□□□ -1.75
HPS3Q969F9 SEPT14P3-201ENST00000439401 183 ntBASIC4.12□□□□□ -1.75
HPS3Q969F9 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.12□□□□□ -1.75
HPS3Q969F9 AL732372.2-207ENST00000445840 183 ntBASIC4.12□□□□□ -1.75
HPS3Q969F9 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC4.12□□□□□ -1.75
HPS3Q969F9 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC4.12□□□□□ -1.75
HPS3Q969F9 SEPT14P2-201ENST00000453405 183 ntBASIC4.12□□□□□ -1.75
HPS3Q969F9 RNU6-420P-201ENST00000458780 107 ntBASIC4.12□□□□□ -1.75
HPS3Q969F9 RNU6-953P-201ENST00000459154 107 ntBASIC4.12□□□□□ -1.75
HPS3Q969F9 U8.18-201ENST00000459285 133 ntBASIC4.12□□□□□ -1.75
HPS3Q969F9 AC078785.3-201ENST00000476607 425 ntBASIC4.12□□□□□ -1.75
HPS3Q969F9 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.12□□□□□ -1.75
HPS3Q969F9 SEPT14P4-201ENST00000513445 186 ntBASIC4.12□□□□□ -1.75
HPS3Q969F9 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC4.12□□□□□ -1.75
HPS3Q969F9 SNORA40.12-201ENST00000516329 111 ntBASIC4.12□□□□□ -1.75
HPS3Q969F9 SCARNA15.2-201ENST00000516409 127 ntBASIC4.12□□□□□ -1.75
HPS3Q969F9 FO082796.1-201ENST00000523795 183 ntBASIC4.12□□□□□ -1.75
HPS3Q969F9 AP006587.4-201ENST00000526053 529 ntBASIC4.12□□□□□ -1.75
HPS3Q969F9 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC4.12□□□□□ -1.75
HPS3Q969F9 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.12□□□□□ -1.75
HPS3Q969F9 CYCSP30-201ENST00000546447 172 ntBASIC4.12□□□□□ -1.75
HPS3Q969F9 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.12□□□□□ -1.75
HPS3Q969F9 MIR5685-201ENST00000579080 79 ntBASIC4.12□□□□□ -1.75
HPS3Q969F9 AC002545.1-201ENST00000592511 181 ntBASIC4.12□□□□□ -1.75
HPS3Q969F9 AP000907.4-201ENST00000604143 237 ntBASIC4.12□□□□□ -1.75
HPS3Q969F9 RNU1-30P-201ENST00000606575 163 ntBASIC4.12□□□□□ -1.75
HPS3Q969F9 AC025034.2-201ENST00000623264 286 ntBASIC4.12□□□□□ -1.75
HPS3Q969F9 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.12□□□□□ -1.75
HPS3Q969F9 AC244205.2-202ENST00000635781 342 ntBASIC4.12□□□□□ -1.75
HPS3Q969F9 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HPS3Q969F9 AL161912.2-201ENST00000565707 3007 ntBASIC4.12□□□□□ -1.75
HPS3Q969F9 CKAP2P1-201ENST00000555477 2049 ntBASIC4.12□□□□□ -1.75
HPS3Q969F9 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
HPS3Q969F9 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.12□□□□□ -1.75
HPS3Q969F9 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.11□□□□□ -1.75
HPS3Q969F9 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.11□□□□□ -1.75
HPS3Q969F9 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
HPS3Q969F9 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HPS3Q969F9 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
HPS3Q969F9 TNPO1P3-201ENST00000436471 2662 ntBASIC4.11□□□□□ -1.75
HPS3Q969F9 Y_RNA.295-201ENST00000364918 102 ntBASIC4.11□□□□□ -1.75
HPS3Q969F9 RNU6-996P-201ENST00000365438 107 ntBASIC4.11□□□□□ -1.75
HPS3Q969F9 Y_RNA.381-201ENST00000365666 102 ntBASIC4.11□□□□□ -1.75
HPS3Q969F9 SNORA24.1-201ENST00000384401 135 ntBASIC4.11□□□□□ -1.75
HPS3Q969F9 RNA5SP424-201ENST00000390988 115 ntBASIC4.11□□□□□ -1.75
HPS3Q969F9 AL591416.1-201ENST00000404015 867 ntBASIC4.11□□□□□ -1.75
HPS3Q969F9 Z98941.1-201ENST00000407764 100 ntBASIC4.11□□□□□ -1.75
HPS3Q969F9 AL591419.1-201ENST00000427423 339 ntBASIC4.11□□□□□ -1.75
HPS3Q969F9 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC4.11□□□□□ -1.75
HPS3Q969F9 AL590383.1-201ENST00000428602 75 ntBASIC4.11□□□□□ -1.75
HPS3Q969F9 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC4.11□□□□□ -1.75
HPS3Q969F9 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.11□□□□□ -1.75
HPS3Q969F9 AC016691.1-201ENST00000441321 413 ntBASIC4.11□□□□□ -1.75
HPS3Q969F9 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC4.11□□□□□ -1.75
HPS3Q969F9 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.11□□□□□ -1.75
HPS3Q969F9 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.11□□□□□ -1.75
HPS3Q969F9 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HPS3Q969F9 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.11□□□□□ -1.75
HPS3Q969F9 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC4.11□□□□□ -1.75
HPS3Q969F9 RPL9P32-201ENST00000464118 620 ntBASIC4.11□□□□□ -1.75
HPS3Q969F9 AC108078.2-201ENST00000510750 236 ntBASIC4.11□□□□□ -1.75
HPS3Q969F9 NRON-201ENST00000517270 370 ntBASIC4.11□□□□□ -1.75
HPS3Q969F9 NARSP2-201ENST00000518524 679 ntBASIC4.11□□□□□ -1.75
HPS3Q969F9 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC4.11□□□□□ -1.75
HPS3Q969F9 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC4.11□□□□□ -1.75
HPS3Q969F9 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC4.11□□□□□ -1.75
HPS3Q969F9 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC4.11□□□□□ -1.75
HPS3Q969F9 NRBF2P5-201ENST00000603087 788 ntBASIC4.11□□□□□ -1.75
HPS3Q969F9 WT1-AS_8.1-201ENST00000615200 275 ntBASIC4.11□□□□□ -1.75
HPS3Q969F9 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
HPS3Q969F9 AC002553.4-201ENST00000616896 331 ntBASIC4.11□□□□□ -1.75
HPS3Q969F9 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.11□□□□□ -1.75
HPS3Q969F9 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.11□□□□□ -1.75
HPS3Q969F9 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HPS3Q969F9 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.11□□□□□ -1.75
HPS3Q969F9 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
HPS3Q969F9 AC007656.2-201ENST00000624902 4547 ntBASIC4.11□□□□□ -1.75
HPS3Q969F9 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
HPS3Q969F9 AC004520.1-201ENST00000608362 1413 ntBASIC4.11□□□□□ -1.75
HPS3Q969F9 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HPS3Q969F9 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.1□□□□□ -1.75
HPS3Q969F9 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HPS3Q969F9 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
HPS3Q969F9 Y_RNA.89-201ENST00000363031 102 ntBASIC4.1□□□□□ -1.75
HPS3Q969F9 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC4.1□□□□□ -1.75
HPS3Q969F9 SNORA69-201ENST00000383895 132 ntBASIC4.1□□□□□ -1.75
HPS3Q969F9 RN7SKP156-201ENST00000410308 342 ntBASIC4.1□□□□□ -1.75
HPS3Q969F9 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms