Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
AP3S1Q92572 SNORD46.1-201ENST00000364139 104 ntBASIC1.61□□□□□ -2.15
AP3S1Q92572 RNU6-1005P-201ENST00000384519 107 ntBASIC1.61□□□□□ -2.15
AP3S1Q92572 HMGN2P39-201ENST00000398005 273 ntBASIC1.61□□□□□ -2.15
AP3S1Q92572 RNU2-20P-201ENST00000410425 191 ntBASIC1.61□□□□□ -2.15
AP3S1Q92572 RPS20P15-201ENST00000412792 311 ntBASIC1.61□□□□□ -2.15
AP3S1Q92572 AL357078.2-201ENST00000416486 427 ntBASIC1.61□□□□□ -2.15
AP3S1Q92572 AC007742.1-201ENST00000425789 329 ntBASIC1.61□□□□□ -2.15
AP3S1Q92572 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.61□□□□□ -2.15
AP3S1Q92572 ELOCP26-201ENST00000436067 329 ntBASIC1.61□□□□□ -2.15
AP3S1Q92572 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.61□□□□□ -2.15
AP3S1Q92572 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC1.61□□□□□ -2.15
AP3S1Q92572 HGF-207ENST00000453018 721 ntTSL 3 BASIC1.61□□□□□ -2.15
AP3S1Q92572 BZW1P2-201ENST00000473537 826 ntBASIC1.61□□□□□ -2.15
AP3S1Q92572 AC055855.1-201ENST00000489563 579 ntBASIC1.61□□□□□ -2.15
AP3S1Q92572 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.61□□□□□ -2.15
AP3S1Q92572 AC048346.1-201ENST00000510247 144 ntBASIC1.61□□□□□ -2.15
AP3S1Q92572 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC1.61□□□□□ -2.15
AP3S1Q92572 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC1.61□□□□□ -2.15
AP3S1Q92572 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
AP3S1Q92572 CBX3P4-201ENST00000538909 354 ntBASIC1.61□□□□□ -2.15
AP3S1Q92572 AL132857.1-201ENST00000555180 708 ntBASIC1.61□□□□□ -2.15
AP3S1Q92572 AL359212.1-201ENST00000556608 614 ntBASIC1.61□□□□□ -2.15
AP3S1Q92572 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.61□□□□□ -2.15
AP3S1Q92572 AC093519.1-201ENST00000566109 298 ntBASIC1.61□□□□□ -2.15
AP3S1Q92572 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.61□□□□□ -2.15
AP3S1Q92572 AP001033.2-201ENST00000609701 1003 ntBASIC1.61□□□□□ -2.15
AP3S1Q92572 MIR7106-201ENST00000612419 65 ntBASIC1.61□□□□□ -2.15
AP3S1Q92572 AC135507.2-201ENST00000612443 309 ntBASIC1.61□□□□□ -2.15
AP3S1Q92572 AL773524.1-201ENST00000614065 229 ntBASIC1.61□□□□□ -2.15
AP3S1Q92572 AC008443.7-201ENST00000622195 246 ntBASIC1.61□□□□□ -2.15
AP3S1Q92572 AC004777.1-201ENST00000624317 287 ntBASIC1.61□□□□□ -2.15
AP3S1Q92572 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
AP3S1Q92572 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
AP3S1Q92572 MTND5P6-201ENST00000422338 1798 ntBASIC1.6□□□□□ -2.15
AP3S1Q92572 AL356473.1-201ENST00000406203 1408 ntBASIC1.6□□□□□ -2.15
AP3S1Q92572 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
AP3S1Q92572 RNU4-42P-201ENST00000364738 142 ntBASIC1.6□□□□□ -2.15
AP3S1Q92572 OR1L1-202ENST00000373686 1083 ntBASIC1.6□□□□□ -2.15
AP3S1Q92572 AL109755.1-201ENST00000401791 649 ntBASIC1.6□□□□□ -2.15
AP3S1Q92572 AL356131.1-201ENST00000405826 414 ntBASIC1.6□□□□□ -2.15
AP3S1Q92572 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.6□□□□□ -2.15
AP3S1Q92572 UBE2Q2P12-201ENST00000414573 204 ntBASIC1.6□□□□□ -2.15
AP3S1Q92572 AC009963.1-201ENST00000417265 157 ntBASIC1.6□□□□□ -2.15
AP3S1Q92572 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.6□□□□□ -2.15
AP3S1Q92572 BPY2DP-201ENST00000422208 265 ntBASIC1.6□□□□□ -2.15
AP3S1Q92572 MTND4P24-201ENST00000424002 397 ntBASIC1.6□□□□□ -2.15
AP3S1Q92572 AC092017.2-201ENST00000427600 362 ntBASIC1.6□□□□□ -2.15
AP3S1Q92572 IFNA20P-201ENST00000436840 528 ntBASIC1.6□□□□□ -2.15
AP3S1Q92572 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
AP3S1Q92572 AC087884.1-201ENST00000469738 328 ntBASIC1.6□□□□□ -2.15
AP3S1Q92572 AC034222.1-201ENST00000494052 532 ntBASIC1.6□□□□□ -2.15
AP3S1Q92572 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.6□□□□□ -2.15
AP3S1Q92572 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
AP3S1Q92572 AC109471.1-201ENST00000511631 612 ntBASIC1.6□□□□□ -2.15
AP3S1Q92572 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC1.6□□□□□ -2.15
AP3S1Q92572 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC1.6□□□□□ -2.15
AP3S1Q92572 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.6□□□□□ -2.15
AP3S1Q92572 MIR1254-2-201ENST00000579553 63 ntBASIC1.6□□□□□ -2.15
AP3S1Q92572 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.6□□□□□ -2.15
AP3S1Q92572 MIR4765-201ENST00000585007 77 ntBASIC1.6□□□□□ -2.15
AP3S1Q92572 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC1.6□□□□□ -2.15
AP3S1Q92572 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.59□□□□□ -2.15
AP3S1Q92572 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.59□□□□□ -2.15
AP3S1Q92572 GNG5P1-201ENST00000255500 204 ntBASIC1.59□□□□□ -2.15
AP3S1Q92572 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
AP3S1Q92572 SNORA23-201ENST00000365128 182 ntBASIC1.59□□□□□ -2.15
AP3S1Q92572 RNA5SP171-201ENST00000391071 115 ntBASIC1.59□□□□□ -2.15
AP3S1Q92572 RNU2-33P-201ENST00000410344 192 ntBASIC1.59□□□□□ -2.15
AP3S1Q92572 RNA5SP450-201ENST00000411206 102 ntBASIC1.59□□□□□ -2.15
AP3S1Q92572 RPS24P7-201ENST00000416921 246 ntBASIC1.59□□□□□ -2.15
AP3S1Q92572 AC244636.1-201ENST00000421152 228 ntBASIC1.59□□□□□ -2.15
AP3S1Q92572 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.59□□□□□ -2.15
AP3S1Q92572 HSPE1P21-201ENST00000438283 308 ntBASIC1.59□□□□□ -2.15
AP3S1Q92572 AC241584.1-201ENST00000438469 1241 ntBASIC1.59□□□□□ -2.15
AP3S1Q92572 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.59□□□□□ -2.15
AP3S1Q92572 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.59□□□□□ -2.15
AP3S1Q92572 RPL7P12-201ENST00000446719 750 ntBASIC1.59□□□□□ -2.15
AP3S1Q92572 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC1.59□□□□□ -2.15
AP3S1Q92572 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.59□□□□□ -2.15
AP3S1Q92572 AC012435.1-202ENST00000568772 240 ntBASIC1.59□□□□□ -2.15
AP3S1Q92572 AL138963.2-201ENST00000605137 226 ntBASIC1.59□□□□□ -2.15
AP3S1Q92572 AC020658.4-201ENST00000613987 684 ntBASIC1.59□□□□□ -2.15
AP3S1Q92572 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
AP3S1Q92572 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
AP3S1Q92572 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
AP3S1Q92572 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.58□□□□□ -2.16
AP3S1Q92572 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
AP3S1Q92572 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.58□□□□□ -2.16
AP3S1Q92572 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
AP3S1Q92572 RNU6-486P-201ENST00000363116 107 ntBASIC1.58□□□□□ -2.16
AP3S1Q92572 U3.13-201ENST00000364804 214 ntBASIC1.58□□□□□ -2.16
AP3S1Q92572 SNORD48-201ENST00000364953 64 ntBASIC1.58□□□□□ -2.16
AP3S1Q92572 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.58□□□□□ -2.16
AP3S1Q92572 SNORD116-23-201ENST00000384645 92 ntBASIC1.58□□□□□ -2.16
AP3S1Q92572 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
AP3S1Q92572 RNU2-63P-201ENST00000410792 194 ntBASIC1.58□□□□□ -2.16
AP3S1Q92572 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.58□□□□□ -2.16
AP3S1Q92572 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.58□□□□□ -2.16
AP3S1Q92572 PGBD4P6-201ENST00000421501 610 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms