Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 AC078814.3-201ENST00000553036 491 ntBASIC3.82□□□□□ -1.8
ATG4AQ8WYN0 MIR4738-201ENST00000579134 87 ntBASIC3.82□□□□□ -1.8
ATG4AQ8WYN0 MIR4644-201ENST00000579929 84 ntBASIC3.82□□□□□ -1.8
ATG4AQ8WYN0 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
ATG4AQ8WYN0 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.82□□□□□ -1.8
ATG4AQ8WYN0 SNORD84-203ENST00000584275 78 ntBASIC3.82□□□□□ -1.8
ATG4AQ8WYN0 AC006116.10-201ENST00000591836 581 ntBASIC3.82□□□□□ -1.8
ATG4AQ8WYN0 AC087045.1-201ENST00000605856 382 ntBASIC3.82□□□□□ -1.8
ATG4AQ8WYN0 RNU6-89P-201ENST00000606519 100 ntBASIC3.82□□□□□ -1.8
ATG4AQ8WYN0 AC023043.4-201ENST00000612081 449 ntBASIC3.82□□□□□ -1.8
ATG4AQ8WYN0 AC068831.8-201ENST00000620171 435 ntBASIC3.82□□□□□ -1.8
ATG4AQ8WYN0 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.82□□□□□ -1.8
ATG4AQ8WYN0 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.82□□□□□ -1.8
ATG4AQ8WYN0 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.82□□□□□ -1.8
ATG4AQ8WYN0 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ATG4AQ8WYN0 MFSD8-236ENST00000641509 4050 ntBASIC3.82□□□□□ -1.8
ATG4AQ8WYN0 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
ATG4AQ8WYN0 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ATG4AQ8WYN0 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.81□□□□□ -1.8
ATG4AQ8WYN0 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
ATG4AQ8WYN0 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
ATG4AQ8WYN0 API5P2-201ENST00000397055 1498 ntBASIC3.81□□□□□ -1.8
ATG4AQ8WYN0 MAPK10-372ENST00000641954 3413 ntBASIC3.81□□□□□ -1.8
ATG4AQ8WYN0 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.81□□□□□ -1.8
ATG4AQ8WYN0 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
ATG4AQ8WYN0 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
ATG4AQ8WYN0 XIAPP3-201ENST00000312918 795 ntBASIC3.81□□□□□ -1.8
ATG4AQ8WYN0 SNORD81.2-201ENST00000365153 76 ntBASIC3.81□□□□□ -1.8
ATG4AQ8WYN0 Y_RNA.356-201ENST00000365475 113 ntBASIC3.81□□□□□ -1.8
ATG4AQ8WYN0 RNA5SP283-201ENST00000365604 119 ntBASIC3.81□□□□□ -1.8
ATG4AQ8WYN0 RPL32P23-201ENST00000397237 405 ntBASIC3.81□□□□□ -1.8
ATG4AQ8WYN0 RNU6-387P-201ENST00000411331 105 ntBASIC3.81□□□□□ -1.8
ATG4AQ8WYN0 RHEBP3-201ENST00000411920 351 ntBASIC3.81□□□□□ -1.8
ATG4AQ8WYN0 RPL30P2-201ENST00000414021 291 ntBASIC3.81□□□□□ -1.8
ATG4AQ8WYN0 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.81□□□□□ -1.8
ATG4AQ8WYN0 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.81□□□□□ -1.8
ATG4AQ8WYN0 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.81□□□□□ -1.8
ATG4AQ8WYN0 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.81□□□□□ -1.8
ATG4AQ8WYN0 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.81□□□□□ -1.8
ATG4AQ8WYN0 SNRPFP3-201ENST00000457792 225 ntBASIC3.81□□□□□ -1.8
ATG4AQ8WYN0 RNU7-180P-201ENST00000459240 63 ntBASIC3.81□□□□□ -1.8
ATG4AQ8WYN0 FTH1P2-201ENST00000466086 412 ntBASIC3.81□□□□□ -1.8
ATG4AQ8WYN0 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.81□□□□□ -1.8
ATG4AQ8WYN0 AC091885.1-201ENST00000506658 268 ntBASIC3.81□□□□□ -1.8
ATG4AQ8WYN0 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.81□□□□□ -1.8
ATG4AQ8WYN0 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
ATG4AQ8WYN0 AC108078.2-201ENST00000510750 236 ntBASIC3.81□□□□□ -1.8
ATG4AQ8WYN0 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.81□□□□□ -1.8
ATG4AQ8WYN0 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.81□□□□□ -1.8
ATG4AQ8WYN0 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC3.81□□□□□ -1.8
ATG4AQ8WYN0 DEFB109D-201ENST00000529497 240 ntBASIC3.81□□□□□ -1.8
ATG4AQ8WYN0 TOMM20P2-201ENST00000540082 421 ntBASIC3.81□□□□□ -1.8
ATG4AQ8WYN0 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.81□□□□□ -1.8
ATG4AQ8WYN0 AC136624.4-201ENST00000573044 370 ntBASIC3.81□□□□□ -1.8
ATG4AQ8WYN0 AC087499.8-201ENST00000578406 226 ntBASIC3.81□□□□□ -1.8
ATG4AQ8WYN0 MIR4424-201ENST00000585257 86 ntBASIC3.81□□□□□ -1.8
ATG4AQ8WYN0 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.81□□□□□ -1.8
ATG4AQ8WYN0 AL356055.1-201ENST00000602528 446 ntBASIC3.81□□□□□ -1.8
ATG4AQ8WYN0 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.81□□□□□ -1.8
ATG4AQ8WYN0 AL022099.1-201ENST00000604551 712 ntBASIC3.81□□□□□ -1.8
ATG4AQ8WYN0 AC009233.1-201ENST00000616477 371 ntBASIC3.81□□□□□ -1.8
ATG4AQ8WYN0 AC009248.2-201ENST00000619826 254 ntBASIC3.81□□□□□ -1.8
ATG4AQ8WYN0 AC015967.1-201ENST00000619893 476 ntBASIC3.81□□□□□ -1.8
ATG4AQ8WYN0 AL589994.2-201ENST00000621124 579 ntBASIC3.81□□□□□ -1.8
ATG4AQ8WYN0 AC112487.2-201ENST00000637950 304 ntBASIC3.81□□□□□ -1.8
ATG4AQ8WYN0 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ATG4AQ8WYN0 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
ATG4AQ8WYN0 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.81□□□□□ -1.8
ATG4AQ8WYN0 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.81□□□□□ -1.8
ATG4AQ8WYN0 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
ATG4AQ8WYN0 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
ATG4AQ8WYN0 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
ATG4AQ8WYN0 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
ATG4AQ8WYN0 Y_RNA.813-201ENST00000364639 102 ntBASIC3.8□□□□□ -1.8
ATG4AQ8WYN0 RNU4-66P-201ENST00000365199 138 ntBASIC3.8□□□□□ -1.8
ATG4AQ8WYN0 RNU6-946P-201ENST00000383878 107 ntBASIC3.8□□□□□ -1.8
ATG4AQ8WYN0 RNU6-1074P-201ENST00000383995 104 ntBASIC3.8□□□□□ -1.8
ATG4AQ8WYN0 RNU6-76P-201ENST00000384060 104 ntBASIC3.8□□□□□ -1.8
ATG4AQ8WYN0 RNU6-38P-201ENST00000384085 107 ntBASIC3.8□□□□□ -1.8
ATG4AQ8WYN0 Y_RNA.529-201ENST00000384586 119 ntBASIC3.8□□□□□ -1.8
ATG4AQ8WYN0 Y_RNA.576-201ENST00000384781 102 ntBASIC3.8□□□□□ -1.8
ATG4AQ8WYN0 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
ATG4AQ8WYN0 NDUFS5P1-201ENST00000405668 289 ntBASIC3.8□□□□□ -1.8
ATG4AQ8WYN0 Z98941.1-201ENST00000407764 100 ntBASIC3.8□□□□□ -1.8
ATG4AQ8WYN0 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.8□□□□□ -1.8
ATG4AQ8WYN0 AC068533.1-201ENST00000418542 415 ntBASIC3.8□□□□□ -1.8
ATG4AQ8WYN0 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.8□□□□□ -1.8
ATG4AQ8WYN0 AL139247.1-201ENST00000422768 325 ntBASIC3.8□□□□□ -1.8
ATG4AQ8WYN0 RPL35AP12-201ENST00000425362 338 ntBASIC3.8□□□□□ -1.8
ATG4AQ8WYN0 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.8□□□□□ -1.8
ATG4AQ8WYN0 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.8□□□□□ -1.8
ATG4AQ8WYN0 RNU6-333P-201ENST00000459117 107 ntBASIC3.8□□□□□ -1.8
ATG4AQ8WYN0 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.8□□□□□ -1.8
ATG4AQ8WYN0 RPL21P99-201ENST00000480369 423 ntBASIC3.8□□□□□ -1.8
ATG4AQ8WYN0 RPL23AP55-201ENST00000498163 452 ntBASIC3.8□□□□□ -1.8
ATG4AQ8WYN0 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
ATG4AQ8WYN0 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.8□□□□□ -1.8
ATG4AQ8WYN0 RNU6-390P-201ENST00000516259 103 ntBASIC3.8□□□□□ -1.8
ATG4AQ8WYN0 RNA5SP164-201ENST00000516533 110 ntBASIC3.8□□□□□ -1.8
ATG4AQ8WYN0 RNU6-1314P-201ENST00000517139 104 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms