Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 AL109913.1-201ENST00000421173 514 ntBASIC3.36□□□□□ -1.87
RAB40AQ8WXH6 EIF1P1-201ENST00000421436 341 ntBASIC3.36□□□□□ -1.87
RAB40AQ8WXH6 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.36□□□□□ -1.87
RAB40AQ8WXH6 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RAB40AQ8WXH6 AL691449.1-201ENST00000426570 421 ntBASIC3.36□□□□□ -1.87
RAB40AQ8WXH6 SNRPEP4-201ENST00000435815 279 ntBASIC3.36□□□□□ -1.87
RAB40AQ8WXH6 RPL7P54-201ENST00000438336 674 ntBASIC3.36□□□□□ -1.87
RAB40AQ8WXH6 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
RAB40AQ8WXH6 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC3.36□□□□□ -1.87
RAB40AQ8WXH6 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.36□□□□□ -1.87
RAB40AQ8WXH6 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.36□□□□□ -1.87
RAB40AQ8WXH6 SSXP4-201ENST00000451349 245 ntBASIC3.36□□□□□ -1.87
RAB40AQ8WXH6 AL356010.1-201ENST00000456364 102 ntBASIC3.36□□□□□ -1.87
RAB40AQ8WXH6 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.36□□□□□ -1.87
RAB40AQ8WXH6 RPL7P5-201ENST00000471472 736 ntBASIC3.36□□□□□ -1.87
RAB40AQ8WXH6 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.36□□□□□ -1.87
RAB40AQ8WXH6 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.36□□□□□ -1.87
RAB40AQ8WXH6 Y_RNA.689-201ENST00000516589 107 ntBASIC3.36□□□□□ -1.87
RAB40AQ8WXH6 RNA5SP471-201ENST00000516971 106 ntBASIC3.36□□□□□ -1.87
RAB40AQ8WXH6 RNA5SP503-201ENST00000517047 117 ntBASIC3.36□□□□□ -1.87
RAB40AQ8WXH6 RNA5SP290-201ENST00000517133 127 ntBASIC3.36□□□□□ -1.87
RAB40AQ8WXH6 RNU6-1231P-201ENST00000517185 103 ntBASIC3.36□□□□□ -1.87
RAB40AQ8WXH6 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.36□□□□□ -1.87
RAB40AQ8WXH6 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.36□□□□□ -1.87
RAB40AQ8WXH6 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.36□□□□□ -1.87
RAB40AQ8WXH6 AL512310.1-201ENST00000548639 172 ntBASIC3.36□□□□□ -1.87
RAB40AQ8WXH6 AC091516.1-201ENST00000549191 703 ntBASIC3.36□□□□□ -1.87
RAB40AQ8WXH6 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.36□□□□□ -1.87
RAB40AQ8WXH6 AC106785.1-201ENST00000565935 262 ntBASIC3.36□□□□□ -1.87
RAB40AQ8WXH6 AL606490.9-201ENST00000603331 271 ntBASIC3.36□□□□□ -1.87
RAB40AQ8WXH6 AC098826.3-201ENST00000603823 466 ntBASIC3.36□□□□□ -1.87
RAB40AQ8WXH6 AC107304.1-201ENST00000604229 296 ntBASIC3.36□□□□□ -1.87
RAB40AQ8WXH6 AC007621.1-201ENST00000604544 437 ntBASIC3.36□□□□□ -1.87
RAB40AQ8WXH6 AL158032.1-201ENST00000605401 106 ntBASIC3.36□□□□□ -1.87
RAB40AQ8WXH6 AC008962.1-201ENST00000605729 304 ntBASIC3.36□□□□□ -1.87
RAB40AQ8WXH6 AP001596.2-201ENST00000608410 312 ntBASIC3.36□□□□□ -1.87
RAB40AQ8WXH6 AC130324.3-201ENST00000614165 542 ntBASIC3.36□□□□□ -1.87
RAB40AQ8WXH6 AL359547.2-201ENST00000615810 418 ntBASIC3.36□□□□□ -1.87
RAB40AQ8WXH6 AL391261.4-201ENST00000616012 481 ntBASIC3.36□□□□□ -1.87
RAB40AQ8WXH6 MIR6875-201ENST00000617506 72 ntBASIC3.36□□□□□ -1.87
RAB40AQ8WXH6 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RAB40AQ8WXH6 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
RAB40AQ8WXH6 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.36□□□□□ -1.87
RAB40AQ8WXH6 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.36□□□□□ -1.87
RAB40AQ8WXH6 U6.98-201ENST00000637157 84 ntBASIC3.36□□□□□ -1.87
RAB40AQ8WXH6 FAM35BP-202ENST00000497389 3337 ntBASIC3.36□□□□□ -1.87
RAB40AQ8WXH6 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.36□□□□□ -1.87
RAB40AQ8WXH6 AL049641.1-201ENST00000441055 1948 ntBASIC3.36□□□□□ -1.87
RAB40AQ8WXH6 PWAR6-201ENST00000552334 4618 ntBASIC3.36□□□□□ -1.87
RAB40AQ8WXH6 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
RAB40AQ8WXH6 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RAB40AQ8WXH6 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RAB40AQ8WXH6 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
RAB40AQ8WXH6 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.36□□□□□ -1.87
RAB40AQ8WXH6 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.35□□□□□ -1.87
RAB40AQ8WXH6 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.35□□□□□ -1.87
RAB40AQ8WXH6 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
RAB40AQ8WXH6 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RAB40AQ8WXH6 RN7SKP280-201ENST00000364196 304 ntBASIC3.35□□□□□ -1.87
RAB40AQ8WXH6 Y_RNA.245-201ENST00000364493 95 ntBASIC3.35□□□□□ -1.87
RAB40AQ8WXH6 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RAB40AQ8WXH6 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RAB40AQ8WXH6 AL591416.1-201ENST00000404015 867 ntBASIC3.35□□□□□ -1.87
RAB40AQ8WXH6 RNU4-6P-201ENST00000410804 122 ntBASIC3.35□□□□□ -1.87
RAB40AQ8WXH6 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.35□□□□□ -1.87
RAB40AQ8WXH6 HMGB3P20-201ENST00000417997 600 ntBASIC3.35□□□□□ -1.87
RAB40AQ8WXH6 RPL7P2-201ENST00000427639 268 ntBASIC3.35□□□□□ -1.87
RAB40AQ8WXH6 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.35□□□□□ -1.87
RAB40AQ8WXH6 UBE2V1P8-201ENST00000437166 265 ntBASIC3.35□□□□□ -1.87
RAB40AQ8WXH6 MTATP6P13-201ENST00000438531 667 ntBASIC3.35□□□□□ -1.87
RAB40AQ8WXH6 RPS29P31-201ENST00000446147 164 ntBASIC3.35□□□□□ -1.87
RAB40AQ8WXH6 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RAB40AQ8WXH6 RPL39P36-201ENST00000490784 156 ntBASIC3.35□□□□□ -1.87
RAB40AQ8WXH6 AC026784.1-201ENST00000507986 352 ntBASIC3.35□□□□□ -1.87
RAB40AQ8WXH6 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RAB40AQ8WXH6 APOOP4-201ENST00000513530 597 ntBASIC3.35□□□□□ -1.87
RAB40AQ8WXH6 RNU6-123P-201ENST00000516163 102 ntBASIC3.35□□□□□ -1.87
RAB40AQ8WXH6 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.35□□□□□ -1.87
RAB40AQ8WXH6 AC104383.1-201ENST00000530297 370 ntBASIC3.35□□□□□ -1.87
RAB40AQ8WXH6 RANP3-201ENST00000530970 276 ntBASIC3.35□□□□□ -1.87
RAB40AQ8WXH6 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.35□□□□□ -1.87
RAB40AQ8WXH6 ADI1P3-201ENST00000549509 470 ntBASIC3.35□□□□□ -1.87
RAB40AQ8WXH6 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.35□□□□□ -1.87
RAB40AQ8WXH6 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.35□□□□□ -1.87
RAB40AQ8WXH6 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.35□□□□□ -1.87
RAB40AQ8WXH6 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.35□□□□□ -1.87
RAB40AQ8WXH6 MIR4775-201ENST00000581168 75 ntBASIC3.35□□□□□ -1.87
RAB40AQ8WXH6 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.35□□□□□ -1.87
RAB40AQ8WXH6 AL161798.1-201ENST00000604630 131 ntBASIC3.35□□□□□ -1.87
RAB40AQ8WXH6 AL137849.1-201ENST00000604767 169 ntBASIC3.35□□□□□ -1.87
RAB40AQ8WXH6 AC022893.3-201ENST00000607665 437 ntBASIC3.35□□□□□ -1.87
RAB40AQ8WXH6 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.35□□□□□ -1.87
RAB40AQ8WXH6 AC090517.2-201ENST00000614966 680 ntBASIC3.35□□□□□ -1.87
RAB40AQ8WXH6 AL021368.2-201ENST00000606125 5352 ntBASIC3.35□□□□□ -1.87
RAB40AQ8WXH6 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.35□□□□□ -1.87
RAB40AQ8WXH6 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RAB40AQ8WXH6 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.35□□□□□ -1.87
RAB40AQ8WXH6 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
RAB40AQ8WXH6 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RAB40AQ8WXH6 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms