Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 DEFB109C-201ENST00000382575 264 ntBASIC4.47□□□□□ -1.69
SH3RF3Q8TEJ3 DEFB109B-201ENST00000382656 264 ntBASIC4.47□□□□□ -1.69
SH3RF3Q8TEJ3 CD3D-202ENST00000392884 476 ntTSL 2 BASIC4.47□□□□□ -1.69
SH3RF3Q8TEJ3 HMGB1P17-201ENST00000403495 628 ntBASIC4.47□□□□□ -1.69
SH3RF3Q8TEJ3 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC4.47□□□□□ -1.69
SH3RF3Q8TEJ3 AL669831.1-202ENST00000428504 417 ntBASIC4.47□□□□□ -1.69
SH3RF3Q8TEJ3 ERLEC1P1-201ENST00000433806 578 ntBASIC4.47□□□□□ -1.69
SH3RF3Q8TEJ3 ELOCP18-201ENST00000434209 337 ntBASIC4.47□□□□□ -1.69
SH3RF3Q8TEJ3 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC4.47□□□□□ -1.69
SH3RF3Q8TEJ3 AC073415.1-201ENST00000449240 153 ntBASIC4.47□□□□□ -1.69
SH3RF3Q8TEJ3 RPL23AP15-201ENST00000450202 459 ntBASIC4.47□□□□□ -1.69
SH3RF3Q8TEJ3 AL356010.1-201ENST00000456364 102 ntBASIC4.47□□□□□ -1.69
SH3RF3Q8TEJ3 AC106707.2-201ENST00000484182 374 ntBASIC4.47□□□□□ -1.69
SH3RF3Q8TEJ3 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC4.47□□□□□ -1.69
SH3RF3Q8TEJ3 AC106872.2-201ENST00000494303 480 ntBASIC4.47□□□□□ -1.69
SH3RF3Q8TEJ3 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC4.47□□□□□ -1.69
SH3RF3Q8TEJ3 RNU6-488P-201ENST00000515918 99 ntBASIC4.47□□□□□ -1.69
SH3RF3Q8TEJ3 RN7SKP295-201ENST00000517264 153 ntBASIC4.47□□□□□ -1.69
SH3RF3Q8TEJ3 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.47□□□□□ -1.69
SH3RF3Q8TEJ3 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SH3RF3Q8TEJ3 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.47□□□□□ -1.69
SH3RF3Q8TEJ3 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SH3RF3Q8TEJ3 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC4.47□□□□□ -1.69
SH3RF3Q8TEJ3 MYL12BP1-201ENST00000569826 507 ntBASIC4.47□□□□□ -1.69
SH3RF3Q8TEJ3 AC017100.2-201ENST00000584628 355 ntBASIC4.47□□□□□ -1.69
SH3RF3Q8TEJ3 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.47□□□□□ -1.69
SH3RF3Q8TEJ3 AC011468.4-201ENST00000603942 409 ntBASIC4.47□□□□□ -1.69
SH3RF3Q8TEJ3 AL137849.1-201ENST00000604767 169 ntBASIC4.47□□□□□ -1.69
SH3RF3Q8TEJ3 FAM157A-202ENST00000615155 405 ntBASIC4.47□□□□□ -1.69
SH3RF3Q8TEJ3 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.47□□□□□ -1.69
SH3RF3Q8TEJ3 MIR4496-201ENST00000635896 61 ntBASIC4.47□□□□□ -1.69
SH3RF3Q8TEJ3 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC4.47□□□□□ -1.69
SH3RF3Q8TEJ3 AC010149.2-201ENST00000637608 315 ntBASIC4.47□□□□□ -1.69
SH3RF3Q8TEJ3 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SH3RF3Q8TEJ3 AL049780.3-201ENST00000624612 1583 ntBASIC4.47□□□□□ -1.69
SH3RF3Q8TEJ3 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SH3RF3Q8TEJ3 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
SH3RF3Q8TEJ3 AC090337.1-201ENST00000579651 2074 ntBASIC4.47□□□□□ -1.69
SH3RF3Q8TEJ3 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SH3RF3Q8TEJ3 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.47□□□□□ -1.69
SH3RF3Q8TEJ3 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.47□□□□□ -1.69
SH3RF3Q8TEJ3 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.47□□□□□ -1.69
SH3RF3Q8TEJ3 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.46□□□□□ -1.7
SH3RF3Q8TEJ3 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
SH3RF3Q8TEJ3 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
SH3RF3Q8TEJ3 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
SH3RF3Q8TEJ3 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SH3RF3Q8TEJ3 RNU6-522P-201ENST00000364497 107 ntBASIC4.46□□□□□ -1.7
SH3RF3Q8TEJ3 U3.15-201ENST00000365398 212 ntBASIC4.46□□□□□ -1.7
SH3RF3Q8TEJ3 RNU6-996P-201ENST00000365438 107 ntBASIC4.46□□□□□ -1.7
SH3RF3Q8TEJ3 RNU6-606P-201ENST00000384721 111 ntBASIC4.46□□□□□ -1.7
SH3RF3Q8TEJ3 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
SH3RF3Q8TEJ3 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.46□□□□□ -1.7
SH3RF3Q8TEJ3 MIR548K-201ENST00000408406 116 ntBASIC4.46□□□□□ -1.7
SH3RF3Q8TEJ3 RNA5SP306-201ENST00000411087 107 ntBASIC4.46□□□□□ -1.7
SH3RF3Q8TEJ3 RPS29P4-201ENST00000414733 161 ntBASIC4.46□□□□□ -1.7
SH3RF3Q8TEJ3 AL160004.2-201ENST00000432935 350 ntBASIC4.46□□□□□ -1.7
SH3RF3Q8TEJ3 HSPD1P21-201ENST00000436541 245 ntBASIC4.46□□□□□ -1.7
SH3RF3Q8TEJ3 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC4.46□□□□□ -1.7
SH3RF3Q8TEJ3 AL451050.1-201ENST00000450126 415 ntBASIC4.46□□□□□ -1.7
SH3RF3Q8TEJ3 PPIAP3-201ENST00000450588 505 ntBASIC4.46□□□□□ -1.7
SH3RF3Q8TEJ3 RPL31P50-201ENST00000471002 296 ntBASIC4.46□□□□□ -1.7
SH3RF3Q8TEJ3 S100A11P1-201ENST00000477525 312 ntBASIC4.46□□□□□ -1.7
SH3RF3Q8TEJ3 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC4.46□□□□□ -1.7
SH3RF3Q8TEJ3 SUMO2P20-201ENST00000520803 283 ntBASIC4.46□□□□□ -1.7
SH3RF3Q8TEJ3 AC107934.1-201ENST00000522215 217 ntBASIC4.46□□□□□ -1.7
SH3RF3Q8TEJ3 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.46□□□□□ -1.7
SH3RF3Q8TEJ3 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.46□□□□□ -1.7
SH3RF3Q8TEJ3 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SH3RF3Q8TEJ3 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
SH3RF3Q8TEJ3 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.46□□□□□ -1.7
SH3RF3Q8TEJ3 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.46□□□□□ -1.7
SH3RF3Q8TEJ3 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
SH3RF3Q8TEJ3 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.46□□□□□ -1.7
SH3RF3Q8TEJ3 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
SH3RF3Q8TEJ3 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SH3RF3Q8TEJ3 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.45□□□□□ -1.7
SH3RF3Q8TEJ3 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SH3RF3Q8TEJ3 IPO8P1-201ENST00000455509 3109 ntBASIC4.45□□□□□ -1.7
SH3RF3Q8TEJ3 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.45□□□□□ -1.7
SH3RF3Q8TEJ3 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SH3RF3Q8TEJ3 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.45□□□□□ -1.7
SH3RF3Q8TEJ3 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
SH3RF3Q8TEJ3 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SH3RF3Q8TEJ3 Y_RNA.5-201ENST00000362334 102 ntBASIC4.45□□□□□ -1.7
SH3RF3Q8TEJ3 RNU1-35P-201ENST00000362782 153 ntBASIC4.45□□□□□ -1.7
SH3RF3Q8TEJ3 Y_RNA.100-201ENST00000363141 102 ntBASIC4.45□□□□□ -1.7
SH3RF3Q8TEJ3 SNORD74.4-201ENST00000364129 80 ntBASIC4.45□□□□□ -1.7
SH3RF3Q8TEJ3 U3.12-201ENST00000364498 214 ntBASIC4.45□□□□□ -1.7
SH3RF3Q8TEJ3 SET-203ENST00000372688 801 ntTSL 2 BASIC4.45□□□□□ -1.7
SH3RF3Q8TEJ3 AC117470.1-201ENST00000381974 330 ntBASIC4.45□□□□□ -1.7
SH3RF3Q8TEJ3 RNU6-1293P-201ENST00000384077 107 ntBASIC4.45□□□□□ -1.7
SH3RF3Q8TEJ3 MIR708-201ENST00000390708 88 ntBASIC4.45□□□□□ -1.7
SH3RF3Q8TEJ3 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.45□□□□□ -1.7
SH3RF3Q8TEJ3 RPS12P23-201ENST00000419579 400 ntBASIC4.45□□□□□ -1.7
SH3RF3Q8TEJ3 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC4.45□□□□□ -1.7
SH3RF3Q8TEJ3 RPL31P12-201ENST00000422587 358 ntBASIC4.45□□□□□ -1.7
SH3RF3Q8TEJ3 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.45□□□□□ -1.7
SH3RF3Q8TEJ3 GPR143P-201ENST00000434155 205 ntBASIC4.45□□□□□ -1.7
SH3RF3Q8TEJ3 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 147.8 ms