Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
TRAF3IP1Q8TDR0 AP003122.5-201ENST00000527668 3766 ntBASIC3.05□□□□□ -1.92
TRAF3IP1Q8TDR0 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.04□□□□□ -1.92
TRAF3IP1Q8TDR0 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.04□□□□□ -1.92
TRAF3IP1Q8TDR0 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.04□□□□□ -1.92
TRAF3IP1Q8TDR0 SNORA54-201ENST00000384281 123 ntBASIC3.04□□□□□ -1.92
TRAF3IP1Q8TDR0 RNA5SP171-201ENST00000391071 115 ntBASIC3.04□□□□□ -1.92
TRAF3IP1Q8TDR0 Z99497.1-201ENST00000421282 135 ntBASIC3.04□□□□□ -1.92
TRAF3IP1Q8TDR0 AC244035.1-201ENST00000430042 390 ntBASIC3.04□□□□□ -1.92
TRAF3IP1Q8TDR0 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.04□□□□□ -1.92
TRAF3IP1Q8TDR0 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
TRAF3IP1Q8TDR0 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC3.04□□□□□ -1.92
TRAF3IP1Q8TDR0 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.04□□□□□ -1.92
TRAF3IP1Q8TDR0 BX510359.1-201ENST00000456973 237 ntBASIC3.04□□□□□ -1.92
TRAF3IP1Q8TDR0 snoU13.28-201ENST00000459235 104 ntBASIC3.04□□□□□ -1.92
TRAF3IP1Q8TDR0 AC087588.1-201ENST00000462203 316 ntBASIC3.04□□□□□ -1.92
TRAF3IP1Q8TDR0 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.04□□□□□ -1.92
TRAF3IP1Q8TDR0 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC3.04□□□□□ -1.92
TRAF3IP1Q8TDR0 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
TRAF3IP1Q8TDR0 PSMA2P1-201ENST00000526365 646 ntBASIC3.04□□□□□ -1.92
TRAF3IP1Q8TDR0 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.04□□□□□ -1.92
TRAF3IP1Q8TDR0 AP002404.1-201ENST00000532005 451 ntBASIC3.04□□□□□ -1.92
TRAF3IP1Q8TDR0 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.04□□□□□ -1.92
TRAF3IP1Q8TDR0 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.04□□□□□ -1.92
TRAF3IP1Q8TDR0 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.04□□□□□ -1.92
TRAF3IP1Q8TDR0 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.04□□□□□ -1.92
TRAF3IP1Q8TDR0 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.04□□□□□ -1.92
TRAF3IP1Q8TDR0 AC006504.3-201ENST00000586818 523 ntBASIC3.04□□□□□ -1.92
TRAF3IP1Q8TDR0 AC083760.1-201ENST00000589621 670 ntBASIC3.04□□□□□ -1.92
TRAF3IP1Q8TDR0 KC877982.1-201ENST00000602313 470 ntBASIC3.04□□□□□ -1.92
TRAF3IP1Q8TDR0 AC015871.2-201ENST00000603605 948 ntBASIC3.04□□□□□ -1.92
TRAF3IP1Q8TDR0 AC090970.3-201ENST00000612566 866 ntBASIC3.04□□□□□ -1.92
TRAF3IP1Q8TDR0 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
TRAF3IP1Q8TDR0 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.04□□□□□ -1.92
TRAF3IP1Q8TDR0 AL356266.1-201ENST00000623311 483 ntBASIC3.04□□□□□ -1.92
TRAF3IP1Q8TDR0 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.04□□□□□ -1.92
TRAF3IP1Q8TDR0 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.04□□□□□ -1.92
TRAF3IP1Q8TDR0 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
TRAF3IP1Q8TDR0 AC000403.1-201ENST00000613696 3585 ntBASIC3.04□□□□□ -1.92
TRAF3IP1Q8TDR0 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
TRAF3IP1Q8TDR0 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC3.03□□□□□ -1.92
TRAF3IP1Q8TDR0 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.03□□□□□ -1.92
TRAF3IP1Q8TDR0 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.03□□□□□ -1.92
TRAF3IP1Q8TDR0 AC129850.1-201ENST00000436203 508 ntBASIC3.03□□□□□ -1.92
TRAF3IP1Q8TDR0 KC877373.1-201ENST00000479066 408 ntBASIC3.03□□□□□ -1.92
TRAF3IP1Q8TDR0 AC009901.1-201ENST00000506703 541 ntBASIC3.03□□□□□ -1.92
TRAF3IP1Q8TDR0 MTND5P13-201ENST00000513046 1079 ntBASIC3.03□□□□□ -1.92
TRAF3IP1Q8TDR0 RNU6-390P-201ENST00000516259 103 ntBASIC3.03□□□□□ -1.92
TRAF3IP1Q8TDR0 RNU6-232P-201ENST00000517144 64 ntBASIC3.03□□□□□ -1.92
TRAF3IP1Q8TDR0 RN7SKP258-201ENST00000517151 304 ntBASIC3.03□□□□□ -1.92
TRAF3IP1Q8TDR0 SNORA31.21-201ENST00000517180 77 ntBASIC3.03□□□□□ -1.92
TRAF3IP1Q8TDR0 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
TRAF3IP1Q8TDR0 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.03□□□□□ -1.92
TRAF3IP1Q8TDR0 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.03□□□□□ -1.92
TRAF3IP1Q8TDR0 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.03□□□□□ -1.92
TRAF3IP1Q8TDR0 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3.03□□□□□ -1.92
TRAF3IP1Q8TDR0 H3F3AP1-201ENST00000559984 334 ntBASIC3.03□□□□□ -1.92
TRAF3IP1Q8TDR0 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.03□□□□□ -1.92
TRAF3IP1Q8TDR0 AC136601.2-201ENST00000604356 474 ntBASIC3.03□□□□□ -1.92
TRAF3IP1Q8TDR0 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.03□□□□□ -1.92
TRAF3IP1Q8TDR0 AC093591.3-201ENST00000634516 308 ntBASIC3.03□□□□□ -1.92
TRAF3IP1Q8TDR0 AC084035.1-201ENST00000634543 607 ntBASIC3.03□□□□□ -1.92
TRAF3IP1Q8TDR0 AL445523.1-201ENST00000451184 1362 ntBASIC3.02□□□□□ -1.93
TRAF3IP1Q8TDR0 AL035425.3-201ENST00000564206 4996 ntBASIC3.02□□□□□ -1.93
TRAF3IP1Q8TDR0 RNA5SP374-201ENST00000362939 125 ntBASIC3.02□□□□□ -1.93
TRAF3IP1Q8TDR0 AL049545.1-201ENST00000401856 572 ntBASIC3.02□□□□□ -1.93
TRAF3IP1Q8TDR0 FO393413.1-201ENST00000402892 195 ntBASIC3.02□□□□□ -1.93
TRAF3IP1Q8TDR0 RNU4-72P-201ENST00000410754 173 ntBASIC3.02□□□□□ -1.93
TRAF3IP1Q8TDR0 RNA5SP492-201ENST00000411330 114 ntBASIC3.02□□□□□ -1.93
TRAF3IP1Q8TDR0 AL451074.5-201ENST00000415894 435 ntBASIC3.02□□□□□ -1.93
TRAF3IP1Q8TDR0 AC099548.1-201ENST00000421443 426 ntBASIC3.02□□□□□ -1.93
TRAF3IP1Q8TDR0 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC3.02□□□□□ -1.93
TRAF3IP1Q8TDR0 HMGN2P30-201ENST00000423237 256 ntBASIC3.02□□□□□ -1.93
TRAF3IP1Q8TDR0 AL365203.2-201ENST00000423444 196 ntBASIC3.02□□□□□ -1.93
TRAF3IP1Q8TDR0 AL365496.1-201ENST00000426885 215 ntBASIC3.02□□□□□ -1.93
TRAF3IP1Q8TDR0 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.02□□□□□ -1.93
TRAF3IP1Q8TDR0 AC118469.1-201ENST00000442943 488 ntBASIC3.02□□□□□ -1.93
TRAF3IP1Q8TDR0 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.02□□□□□ -1.93
TRAF3IP1Q8TDR0 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.02□□□□□ -1.93
TRAF3IP1Q8TDR0 RNU7-23P-201ENST00000459465 62 ntBASIC3.02□□□□□ -1.93
TRAF3IP1Q8TDR0 BZW1P2-201ENST00000473537 826 ntBASIC3.02□□□□□ -1.93
TRAF3IP1Q8TDR0 AL160314.1-201ENST00000490836 438 ntBASIC3.02□□□□□ -1.93
TRAF3IP1Q8TDR0 AC112204.1-201ENST00000502591 103 ntBASIC3.02□□□□□ -1.93
TRAF3IP1Q8TDR0 AC098799.2-201ENST00000509466 868 ntBASIC3.02□□□□□ -1.93
TRAF3IP1Q8TDR0 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC3.02□□□□□ -1.93
TRAF3IP1Q8TDR0 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
TRAF3IP1Q8TDR0 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
TRAF3IP1Q8TDR0 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC3.02□□□□□ -1.93
TRAF3IP1Q8TDR0 MIR3146-201ENST00000580367 79 ntBASIC3.02□□□□□ -1.93
TRAF3IP1Q8TDR0 AC024220.1-201ENST00000603675 484 ntBASIC3.02□□□□□ -1.93
TRAF3IP1Q8TDR0 AL020991.1-201ENST00000612314 373 ntBASIC3.02□□□□□ -1.93
TRAF3IP1Q8TDR0 AL161629.2-201ENST00000615347 275 ntBASIC3.02□□□□□ -1.93
TRAF3IP1Q8TDR0 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.02□□□□□ -1.93
TRAF3IP1Q8TDR0 Z99129.2-201ENST00000619967 314 ntBASIC3.02□□□□□ -1.93
TRAF3IP1Q8TDR0 AC002064.3-201ENST00000623448 346 ntBASIC3.02□□□□□ -1.93
TRAF3IP1Q8TDR0 AC073308.1-201ENST00000623696 305 ntBASIC3.02□□□□□ -1.93
TRAF3IP1Q8TDR0 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
TRAF3IP1Q8TDR0 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
TRAF3IP1Q8TDR0 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
TRAF3IP1Q8TDR0 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms