Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AC068050.1-201ENST00000394891 380 ntBASIC3.41□□□□□ -1.86
LMO3Q8TAP4 AC105402.2-201ENST00000438503 358 ntBASIC3.41□□□□□ -1.86
LMO3Q8TAP4 RPS15AP9-201ENST00000439856 381 ntBASIC3.41□□□□□ -1.86
LMO3Q8TAP4 AC093019.1-201ENST00000443135 252 ntBASIC3.41□□□□□ -1.86
LMO3Q8TAP4 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.41□□□□□ -1.86
LMO3Q8TAP4 AC125238.1-201ENST00000448842 249 ntBASIC3.41□□□□□ -1.86
LMO3Q8TAP4 RNU7-170P-201ENST00000459303 61 ntBASIC3.41□□□□□ -1.86
LMO3Q8TAP4 ST13P14-201ENST00000474095 734 ntBASIC3.41□□□□□ -1.86
LMO3Q8TAP4 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.41□□□□□ -1.86
LMO3Q8TAP4 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.41□□□□□ -1.86
LMO3Q8TAP4 RNU6-1220P-201ENST00000517126 108 ntBASIC3.41□□□□□ -1.86
LMO3Q8TAP4 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.41□□□□□ -1.86
LMO3Q8TAP4 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.41□□□□□ -1.86
LMO3Q8TAP4 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.41□□□□□ -1.86
LMO3Q8TAP4 RPS3AP23-202ENST00000574601 686 ntBASIC3.41□□□□□ -1.86
LMO3Q8TAP4 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.41□□□□□ -1.86
LMO3Q8TAP4 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.41□□□□□ -1.86
LMO3Q8TAP4 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.41□□□□□ -1.86
LMO3Q8TAP4 UBE2L4-201ENST00000587688 464 ntBASIC3.41□□□□□ -1.86
LMO3Q8TAP4 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.41□□□□□ -1.86
LMO3Q8TAP4 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC3.41□□□□□ -1.86
LMO3Q8TAP4 AL136363.1-201ENST00000605349 337 ntBASIC3.41□□□□□ -1.86
LMO3Q8TAP4 AC019176.2-201ENST00000611579 315 ntBASIC3.41□□□□□ -1.86
LMO3Q8TAP4 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.41□□□□□ -1.86
LMO3Q8TAP4 MIR7112-201ENST00000616126 65 ntBASIC3.41□□□□□ -1.86
LMO3Q8TAP4 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.41□□□□□ -1.86
LMO3Q8TAP4 AC009318.4-201ENST00000620496 486 ntBASIC3.41□□□□□ -1.86
LMO3Q8TAP4 MIR6075-201ENST00000620782 95 ntBASIC3.41□□□□□ -1.86
LMO3Q8TAP4 AL158801.5-201ENST00000623123 465 ntBASIC3.41□□□□□ -1.86
LMO3Q8TAP4 AC006026.1-201ENST00000444025 1803 ntBASIC3.41□□□□□ -1.86
LMO3Q8TAP4 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
LMO3Q8TAP4 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
LMO3Q8TAP4 ZNF680P1-201ENST00000436625 1469 ntBASIC3.41□□□□□ -1.86
LMO3Q8TAP4 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.86
LMO3Q8TAP4 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
LMO3Q8TAP4 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
LMO3Q8TAP4 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.4□□□□□ -1.86
LMO3Q8TAP4 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.86
LMO3Q8TAP4 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.86
LMO3Q8TAP4 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
LMO3Q8TAP4 AC093908.1-201ENST00000623125 8092 ntBASIC3.4□□□□□ -1.86
LMO3Q8TAP4 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
LMO3Q8TAP4 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.4□□□□□ -1.87
LMO3Q8TAP4 RNA5SP258-201ENST00000362750 119 ntBASIC3.4□□□□□ -1.87
LMO3Q8TAP4 Y_RNA.142-201ENST00000363491 102 ntBASIC3.4□□□□□ -1.87
LMO3Q8TAP4 RN7SKP44-201ENST00000363602 316 ntBASIC3.4□□□□□ -1.87
LMO3Q8TAP4 Y_RNA.234-201ENST00000364409 97 ntBASIC3.4□□□□□ -1.87
LMO3Q8TAP4 Y_RNA.381-201ENST00000365666 102 ntBASIC3.4□□□□□ -1.87
LMO3Q8TAP4 SNORA7.4-201ENST00000384249 137 ntBASIC3.4□□□□□ -1.87
LMO3Q8TAP4 RNU6-1207P-201ENST00000384343 107 ntBASIC3.4□□□□□ -1.87
LMO3Q8TAP4 Y_RNA.529-201ENST00000384586 119 ntBASIC3.4□□□□□ -1.87
LMO3Q8TAP4 RNA5SP171-201ENST00000391071 115 ntBASIC3.4□□□□□ -1.87
LMO3Q8TAP4 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
LMO3Q8TAP4 SSXP10-201ENST00000402595 565 ntBASIC3.4□□□□□ -1.87
LMO3Q8TAP4 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.4□□□□□ -1.87
LMO3Q8TAP4 OR9R1P-201ENST00000412200 877 ntBASIC3.4□□□□□ -1.87
LMO3Q8TAP4 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.4□□□□□ -1.87
LMO3Q8TAP4 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.4□□□□□ -1.87
LMO3Q8TAP4 SDCBPP3-201ENST00000419629 891 ntBASIC3.4□□□□□ -1.87
LMO3Q8TAP4 AC092832.1-201ENST00000422934 400 ntBASIC3.4□□□□□ -1.87
LMO3Q8TAP4 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.4□□□□□ -1.87
LMO3Q8TAP4 AC006548.1-201ENST00000427470 102 ntBASIC3.4□□□□□ -1.87
LMO3Q8TAP4 AC008850.1-201ENST00000427546 362 ntBASIC3.4□□□□□ -1.87
LMO3Q8TAP4 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.4□□□□□ -1.87
LMO3Q8TAP4 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.4□□□□□ -1.87
LMO3Q8TAP4 SEPT14P3-201ENST00000439401 183 ntBASIC3.4□□□□□ -1.87
LMO3Q8TAP4 AL732372.2-207ENST00000445840 183 ntBASIC3.4□□□□□ -1.87
LMO3Q8TAP4 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.4□□□□□ -1.87
LMO3Q8TAP4 SEPT14P2-201ENST00000453405 183 ntBASIC3.4□□□□□ -1.87
LMO3Q8TAP4 RNU6-261P-201ENST00000459506 102 ntBASIC3.4□□□□□ -1.87
LMO3Q8TAP4 RPL7L1P8-201ENST00000469911 741 ntBASIC3.4□□□□□ -1.87
LMO3Q8TAP4 RPL23AP41-201ENST00000484754 458 ntBASIC3.4□□□□□ -1.87
LMO3Q8TAP4 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.4□□□□□ -1.87
LMO3Q8TAP4 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.4□□□□□ -1.87
LMO3Q8TAP4 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.4□□□□□ -1.87
LMO3Q8TAP4 AC110794.1-201ENST00000505816 425 ntBASIC3.4□□□□□ -1.87
LMO3Q8TAP4 SEPT14P4-201ENST00000513445 186 ntBASIC3.4□□□□□ -1.87
LMO3Q8TAP4 SNORA40.12-201ENST00000516329 111 ntBASIC3.4□□□□□ -1.87
LMO3Q8TAP4 FO082796.1-201ENST00000523795 183 ntBASIC3.4□□□□□ -1.87
LMO3Q8TAP4 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.4□□□□□ -1.87
LMO3Q8TAP4 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.4□□□□□ -1.87
LMO3Q8TAP4 OR8L1P-201ENST00000534005 955 ntBASIC3.4□□□□□ -1.87
LMO3Q8TAP4 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.4□□□□□ -1.87
LMO3Q8TAP4 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.4□□□□□ -1.87
LMO3Q8TAP4 SETP2-201ENST00000553886 926 ntBASIC3.4□□□□□ -1.87
LMO3Q8TAP4 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.4□□□□□ -1.87
LMO3Q8TAP4 MIR3146-201ENST00000580367 79 ntBASIC3.4□□□□□ -1.87
LMO3Q8TAP4 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.4□□□□□ -1.87
LMO3Q8TAP4 AC018638.8-201ENST00000588755 281 ntBASIC3.4□□□□□ -1.87
LMO3Q8TAP4 AC079597.1-201ENST00000624306 508 ntBASIC3.4□□□□□ -1.87
LMO3Q8TAP4 CR381572.1-201ENST00000625098 102 ntBASIC3.4□□□□□ -1.87
LMO3Q8TAP4 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.4□□□□□ -1.87
LMO3Q8TAP4 MTND1P37-201ENST00000636562 264 ntBASIC3.4□□□□□ -1.87
LMO3Q8TAP4 AC112487.2-201ENST00000637950 304 ntBASIC3.4□□□□□ -1.87
LMO3Q8TAP4 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.4□□□□□ -1.87
LMO3Q8TAP4 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
LMO3Q8TAP4 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.4□□□□□ -1.87
LMO3Q8TAP4 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
LMO3Q8TAP4 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.4□□□□□ -1.87
LMO3Q8TAP4 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms