Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 MTND5P7-201ENST00000413558 1798 ntBASIC4.34□□□□□ -1.71
NUP43Q8NFH3 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.34□□□□□ -1.71
NUP43Q8NFH3 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.34□□□□□ -1.72
NUP43Q8NFH3 MAPK10-286ENST00000641208 8747 ntBASIC4.34□□□□□ -1.72
NUP43Q8NFH3 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.34□□□□□ -1.72
NUP43Q8NFH3 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.34□□□□□ -1.72
NUP43Q8NFH3 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.72
NUP43Q8NFH3 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
NUP43Q8NFH3 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
NUP43Q8NFH3 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
NUP43Q8NFH3 MAPK10-304ENST00000641341 3984 ntBASIC4.33□□□□□ -1.72
NUP43Q8NFH3 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.33□□□□□ -1.72
NUP43Q8NFH3 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
NUP43Q8NFH3 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
NUP43Q8NFH3 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.33□□□□□ -1.72
NUP43Q8NFH3 EOGT-210ENST00000615922 1931 ntBASIC4.33□□□□□ -1.72
NUP43Q8NFH3 AL391684.1-202ENST00000641293 1636 ntBASIC4.33□□□□□ -1.72
NUP43Q8NFH3 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
NUP43Q8NFH3 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
NUP43Q8NFH3 Y_RNA.152-201ENST00000363578 100 ntBASIC4.33□□□□□ -1.72
NUP43Q8NFH3 SNORA70E-201ENST00000384492 135 ntBASIC4.33□□□□□ -1.72
NUP43Q8NFH3 SNORD73A-201ENST00000386062 65 ntBASIC4.33□□□□□ -1.72
NUP43Q8NFH3 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
NUP43Q8NFH3 GLULP6-201ENST00000399502 913 ntBASIC4.33□□□□□ -1.72
NUP43Q8NFH3 MIR921-201ENST00000401133 56 ntBASIC4.33□□□□□ -1.72
NUP43Q8NFH3 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.33□□□□□ -1.72
NUP43Q8NFH3 RNU6-174P-201ENST00000410406 106 ntBASIC4.33□□□□□ -1.72
NUP43Q8NFH3 BX842559.1-201ENST00000419615 532 ntBASIC4.33□□□□□ -1.72
NUP43Q8NFH3 Z74021.1-201ENST00000423610 407 ntBASIC4.33□□□□□ -1.72
NUP43Q8NFH3 BX276092.3-201ENST00000424182 230 ntBASIC4.33□□□□□ -1.72
NUP43Q8NFH3 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.33□□□□□ -1.72
NUP43Q8NFH3 AL049745.1-201ENST00000433953 286 ntBASIC4.33□□□□□ -1.72
NUP43Q8NFH3 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.33□□□□□ -1.72
NUP43Q8NFH3 AL590399.6-201ENST00000446396 307 ntBASIC4.33□□□□□ -1.72
NUP43Q8NFH3 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC4.33□□□□□ -1.72
NUP43Q8NFH3 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.33□□□□□ -1.72
NUP43Q8NFH3 MTND3P25-201ENST00000509243 135 ntBASIC4.33□□□□□ -1.72
NUP43Q8NFH3 RNU6-1143P-201ENST00000516125 104 ntBASIC4.33□□□□□ -1.72
NUP43Q8NFH3 RNU2-53P-201ENST00000516257 147 ntBASIC4.33□□□□□ -1.72
NUP43Q8NFH3 RNU6-914P-201ENST00000516749 109 ntBASIC4.33□□□□□ -1.72
NUP43Q8NFH3 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.33□□□□□ -1.72
NUP43Q8NFH3 AC008489.1-201ENST00000524271 483 ntBASIC4.33□□□□□ -1.72
NUP43Q8NFH3 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.33□□□□□ -1.72
NUP43Q8NFH3 AC023157.2-201ENST00000540596 141 ntBASIC4.33□□□□□ -1.72
NUP43Q8NFH3 AC126177.3-201ENST00000551839 688 ntBASIC4.33□□□□□ -1.72
NUP43Q8NFH3 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.33□□□□□ -1.72
NUP43Q8NFH3 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.33□□□□□ -1.72
NUP43Q8NFH3 AC005951.2-201ENST00000576282 495 ntBASIC4.33□□□□□ -1.72
NUP43Q8NFH3 MIR4330-201ENST00000579077 105 ntBASIC4.33□□□□□ -1.72
NUP43Q8NFH3 RNU6-85P-201ENST00000605989 107 ntBASIC4.33□□□□□ -1.72
NUP43Q8NFH3 MIR4275-201ENST00000636486 87 ntBASIC4.33□□□□□ -1.72
NUP43Q8NFH3 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
NUP43Q8NFH3 PRO1804-201ENST00000623780 2050 ntBASIC4.33□□□□□ -1.72
NUP43Q8NFH3 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.32□□□□□ -1.72
NUP43Q8NFH3 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
NUP43Q8NFH3 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
NUP43Q8NFH3 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
NUP43Q8NFH3 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
NUP43Q8NFH3 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
NUP43Q8NFH3 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.32□□□□□ -1.72
NUP43Q8NFH3 AC092435.4-201ENST00000623012 4159 ntBASIC4.32□□□□□ -1.72
NUP43Q8NFH3 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
NUP43Q8NFH3 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.32□□□□□ -1.72
NUP43Q8NFH3 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
NUP43Q8NFH3 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
NUP43Q8NFH3 Y_RNA.314-201ENST00000365114 102 ntBASIC4.32□□□□□ -1.72
NUP43Q8NFH3 RNU6-596P-201ENST00000365395 98 ntBASIC4.32□□□□□ -1.72
NUP43Q8NFH3 Y_RNA.534-201ENST00000384599 112 ntBASIC4.32□□□□□ -1.72
NUP43Q8NFH3 MIR578-201ENST00000384828 96 ntBASIC4.32□□□□□ -1.72
NUP43Q8NFH3 SNORD96B-201ENST00000386148 79 ntBASIC4.32□□□□□ -1.72
NUP43Q8NFH3 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
NUP43Q8NFH3 MIR548I3-201ENST00000408378 149 ntBASIC4.32□□□□□ -1.72
NUP43Q8NFH3 MIR548I1-201ENST00000408810 149 ntBASIC4.32□□□□□ -1.72
NUP43Q8NFH3 RPL7AP73-201ENST00000413490 353 ntBASIC4.32□□□□□ -1.72
NUP43Q8NFH3 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC4.32□□□□□ -1.72
NUP43Q8NFH3 AC108032.1-201ENST00000416706 207 ntBASIC4.32□□□□□ -1.72
NUP43Q8NFH3 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.32□□□□□ -1.72
NUP43Q8NFH3 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.32□□□□□ -1.72
NUP43Q8NFH3 AC073910.1-201ENST00000445047 438 ntBASIC4.32□□□□□ -1.72
NUP43Q8NFH3 PRDX3P3-201ENST00000447765 522 ntBASIC4.32□□□□□ -1.72
NUP43Q8NFH3 AC008571.1-201ENST00000467232 300 ntBASIC4.32□□□□□ -1.72
NUP43Q8NFH3 RPL17P19-201ENST00000489069 552 ntBASIC4.32□□□□□ -1.72
NUP43Q8NFH3 AC018437.1-201ENST00000492214 406 ntBASIC4.32□□□□□ -1.72
NUP43Q8NFH3 RPL36AP41-201ENST00000493820 306 ntBASIC4.32□□□□□ -1.72
NUP43Q8NFH3 RN7SL591P-201ENST00000496150 292 ntBASIC4.32□□□□□ -1.72
NUP43Q8NFH3 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.32□□□□□ -1.72
NUP43Q8NFH3 Y_RNA.680-201ENST00000516441 93 ntBASIC4.32□□□□□ -1.72
NUP43Q8NFH3 Y_RNA.715-201ENST00000517082 110 ntBASIC4.32□□□□□ -1.72
NUP43Q8NFH3 AC069113.1-201ENST00000517763 267 ntBASIC4.32□□□□□ -1.72
NUP43Q8NFH3 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.32□□□□□ -1.72
NUP43Q8NFH3 AC068446.3-201ENST00000555285 382 ntBASIC4.32□□□□□ -1.72
NUP43Q8NFH3 AC105129.1-201ENST00000560250 297 ntBASIC4.32□□□□□ -1.72
NUP43Q8NFH3 AC091042.1-201ENST00000579213 173 ntBASIC4.32□□□□□ -1.72
NUP43Q8NFH3 LRRC37A5P-203ENST00000580181 585 ntBASIC4.32□□□□□ -1.72
NUP43Q8NFH3 MIR5692A1-201ENST00000580523 69 ntBASIC4.32□□□□□ -1.72
NUP43Q8NFH3 MIR5188-201ENST00000583467 113 ntBASIC4.32□□□□□ -1.72
NUP43Q8NFH3 MIR4737-201ENST00000583979 81 ntBASIC4.32□□□□□ -1.72
NUP43Q8NFH3 HMGB2P1-201ENST00000591146 634 ntBASIC4.32□□□□□ -1.72
NUP43Q8NFH3 AC016727.2-201ENST00000603988 621 ntBASIC4.32□□□□□ -1.72
NUP43Q8NFH3 FAM25E-202ENST00000608562 189 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 194.1 ms