Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SYNPOQ8N3V7 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.36□□□□□ -1.71
SYNPOQ8N3V7 RNA5SP52-201ENST00000362448 134 ntBASIC4.36□□□□□ -1.71
SYNPOQ8N3V7 RNU6-797P-201ENST00000363101 109 ntBASIC4.36□□□□□ -1.71
SYNPOQ8N3V7 RNU6-522P-201ENST00000364497 107 ntBASIC4.36□□□□□ -1.71
SYNPOQ8N3V7 RNA5SP151-201ENST00000365632 117 ntBASIC4.36□□□□□ -1.71
SYNPOQ8N3V7 RNU6-45P-201ENST00000384471 107 ntBASIC4.36□□□□□ -1.71
SYNPOQ8N3V7 Y_RNA.534-201ENST00000384599 112 ntBASIC4.36□□□□□ -1.71
SYNPOQ8N3V7 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
SYNPOQ8N3V7 HDGFP1-201ENST00000405943 252 ntBASIC4.36□□□□□ -1.71
SYNPOQ8N3V7 RNA5SP44-201ENST00000410446 133 ntBASIC4.36□□□□□ -1.71
SYNPOQ8N3V7 RNU6-1148P-201ENST00000410992 104 ntBASIC4.36□□□□□ -1.71
SYNPOQ8N3V7 CYCSP19-201ENST00000411715 316 ntBASIC4.36□□□□□ -1.71
SYNPOQ8N3V7 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.36□□□□□ -1.71
SYNPOQ8N3V7 TMEM167AP1-201ENST00000423409 219 ntBASIC4.36□□□□□ -1.71
SYNPOQ8N3V7 AL512844.2-201ENST00000433990 593 ntBASIC4.36□□□□□ -1.71
SYNPOQ8N3V7 MTND1P11-201ENST00000456661 876 ntBASIC4.36□□□□□ -1.71
SYNPOQ8N3V7 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.36□□□□□ -1.71
SYNPOQ8N3V7 RPL21P93-201ENST00000480465 489 ntBASIC4.36□□□□□ -1.71
SYNPOQ8N3V7 AC108022.1-201ENST00000493466 478 ntBASIC4.36□□□□□ -1.71
SYNPOQ8N3V7 MEPE-206ENST00000511670 550 ntTSL 4 BASIC4.36□□□□□ -1.71
SYNPOQ8N3V7 RN7SKP13-201ENST00000515933 244 ntBASIC4.36□□□□□ -1.71
SYNPOQ8N3V7 RNA5SP519-201ENST00000516480 119 ntBASIC4.36□□□□□ -1.71
SYNPOQ8N3V7 RNU1-45P-201ENST00000517191 141 ntBASIC4.36□□□□□ -1.71
SYNPOQ8N3V7 RN7SKP256-201ENST00000517201 314 ntBASIC4.36□□□□□ -1.71
SYNPOQ8N3V7 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC4.36□□□□□ -1.71
SYNPOQ8N3V7 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.36□□□□□ -1.71
SYNPOQ8N3V7 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC4.36□□□□□ -1.71
SYNPOQ8N3V7 AC012119.1-201ENST00000603184 222 ntBASIC4.36□□□□□ -1.71
SYNPOQ8N3V7 AC004825.2-201ENST00000616634 455 ntBASIC4.36□□□□□ -1.71
SYNPOQ8N3V7 MIR6875-201ENST00000617506 72 ntBASIC4.36□□□□□ -1.71
SYNPOQ8N3V7 AL445363.3-201ENST00000623080 671 ntBASIC4.36□□□□□ -1.71
SYNPOQ8N3V7 AC091905.2-201ENST00000623143 306 ntBASIC4.36□□□□□ -1.71
SYNPOQ8N3V7 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
SYNPOQ8N3V7 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
SYNPOQ8N3V7 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
SYNPOQ8N3V7 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
SYNPOQ8N3V7 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SYNPOQ8N3V7 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.36□□□□□ -1.71
SYNPOQ8N3V7 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC4.36□□□□□ -1.71
SYNPOQ8N3V7 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SYNPOQ8N3V7 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SYNPOQ8N3V7 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.35□□□□□ -1.71
SYNPOQ8N3V7 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
SYNPOQ8N3V7 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
SYNPOQ8N3V7 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
SYNPOQ8N3V7 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.35□□□□□ -1.71
SYNPOQ8N3V7 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.35□□□□□ -1.71
SYNPOQ8N3V7 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SYNPOQ8N3V7 RNA5SP130-201ENST00000364431 114 ntBASIC4.35□□□□□ -1.71
SYNPOQ8N3V7 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
SYNPOQ8N3V7 RNU6-1179P-201ENST00000384667 107 ntBASIC4.35□□□□□ -1.71
SYNPOQ8N3V7 MIR670-201ENST00000390142 98 ntBASIC4.35□□□□□ -1.71
SYNPOQ8N3V7 RNU6ATAC-201ENST00000408749 126 ntBASIC4.35□□□□□ -1.71
SYNPOQ8N3V7 RNA5SP36-201ENST00000410197 133 ntBASIC4.35□□□□□ -1.71
SYNPOQ8N3V7 RNA5SP146-201ENST00000410743 123 ntBASIC4.35□□□□□ -1.71
SYNPOQ8N3V7 RPS20P14-201ENST00000412545 360 ntBASIC4.35□□□□□ -1.71
SYNPOQ8N3V7 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.35□□□□□ -1.71
SYNPOQ8N3V7 AL645937.1-202ENST00000421799 937 ntBASIC4.35□□□□□ -1.71
SYNPOQ8N3V7 AC073587.1-201ENST00000447093 876 ntBASIC4.35□□□□□ -1.71
SYNPOQ8N3V7 AL121877.1-201ENST00000453704 622 ntBASIC4.35□□□□□ -1.71
SYNPOQ8N3V7 HMGN2P16-201ENST00000456802 261 ntBASIC4.35□□□□□ -1.71
SYNPOQ8N3V7 snoU13.22-201ENST00000459428 104 ntBASIC4.35□□□□□ -1.71
SYNPOQ8N3V7 DYNLL1P5-201ENST00000467158 270 ntBASIC4.35□□□□□ -1.71
SYNPOQ8N3V7 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.35□□□□□ -1.71
SYNPOQ8N3V7 AC104136.1-201ENST00000512969 394 ntBASIC4.35□□□□□ -1.71
SYNPOQ8N3V7 PANCR-202ENST00000513690 448 ntTSL 2 BASIC4.35□□□□□ -1.71
SYNPOQ8N3V7 RNU6-1315P-201ENST00000517187 99 ntBASIC4.35□□□□□ -1.71
SYNPOQ8N3V7 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC4.35□□□□□ -1.71
SYNPOQ8N3V7 OR11H5P-201ENST00000554039 926 ntBASIC4.35□□□□□ -1.71
SYNPOQ8N3V7 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC4.35□□□□□ -1.71
SYNPOQ8N3V7 TRAV28-201ENST00000557548 323 ntBASIC4.35□□□□□ -1.71
SYNPOQ8N3V7 AC026464.5-201ENST00000562497 722 ntBASIC4.35□□□□□ -1.71
SYNPOQ8N3V7 FGF7P1-201ENST00000582820 288 ntBASIC4.35□□□□□ -1.71
SYNPOQ8N3V7 MIR4719-201ENST00000585233 84 ntBASIC4.35□□□□□ -1.71
SYNPOQ8N3V7 AC008739.3-201ENST00000603262 127 ntBASIC4.35□□□□□ -1.71
SYNPOQ8N3V7 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.35□□□□□ -1.71
SYNPOQ8N3V7 AL121757.2-201ENST00000611223 313 ntBASIC4.35□□□□□ -1.71
SYNPOQ8N3V7 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SYNPOQ8N3V7 RMST_7.1-201ENST00000621935 268 ntBASIC4.35□□□□□ -1.71
SYNPOQ8N3V7 AC022140.2-201ENST00000623500 188 ntBASIC4.35□□□□□ -1.71
SYNPOQ8N3V7 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.35□□□□□ -1.71
SYNPOQ8N3V7 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SYNPOQ8N3V7 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
SYNPOQ8N3V7 Z82217.1-201ENST00000625157 8149 ntBASIC4.35□□□□□ -1.71
SYNPOQ8N3V7 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.35□□□□□ -1.71
SYNPOQ8N3V7 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.35□□□□□ -1.71
SYNPOQ8N3V7 RLIMP1-201ENST00000339626 1680 ntBASIC4.35□□□□□ -1.71
SYNPOQ8N3V7 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.35□□□□□ -1.71
SYNPOQ8N3V7 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.35□□□□□ -1.71
SYNPOQ8N3V7 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
SYNPOQ8N3V7 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
SYNPOQ8N3V7 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.34□□□□□ -1.71
SYNPOQ8N3V7 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
SYNPOQ8N3V7 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.34□□□□□ -1.71
SYNPOQ8N3V7 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
SYNPOQ8N3V7 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SYNPOQ8N3V7 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SYNPOQ8N3V7 RNA5SP307-201ENST00000362863 116 ntBASIC4.34□□□□□ -1.71
SYNPOQ8N3V7 SNORD81.2-201ENST00000365153 76 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 148.2 ms