Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
BEST3Q8N1M1 AC073343.1-201ENST00000328239 651 ntBASIC3.25□□□□□ -1.89
BEST3Q8N1M1 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
BEST3Q8N1M1 Y_RNA.1-201ENST00000352915 104 ntBASIC3.25□□□□□ -1.89
BEST3Q8N1M1 RNU6-960P-201ENST00000364056 120 ntBASIC3.25□□□□□ -1.89
BEST3Q8N1M1 DEFB109C-201ENST00000382575 264 ntBASIC3.25□□□□□ -1.89
BEST3Q8N1M1 DEFB109B-201ENST00000382656 264 ntBASIC3.25□□□□□ -1.89
BEST3Q8N1M1 RNU6-39P-201ENST00000384344 107 ntBASIC3.25□□□□□ -1.89
BEST3Q8N1M1 RNU6-517P-201ENST00000384362 110 ntBASIC3.25□□□□□ -1.89
BEST3Q8N1M1 MIR558-201ENST00000384920 94 ntBASIC3.25□□□□□ -1.89
BEST3Q8N1M1 MIR181A1-201ENST00000385026 110 ntBASIC3.25□□□□□ -1.89
BEST3Q8N1M1 FCF1P9-201ENST00000412546 282 ntBASIC3.25□□□□□ -1.89
BEST3Q8N1M1 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.25□□□□□ -1.89
BEST3Q8N1M1 RAC1P6-201ENST00000423911 575 ntBASIC3.25□□□□□ -1.89
BEST3Q8N1M1 DPPA2P1-201ENST00000428060 556 ntBASIC3.25□□□□□ -1.89
BEST3Q8N1M1 AL356867.1-201ENST00000429623 299 ntBASIC3.25□□□□□ -1.89
BEST3Q8N1M1 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.25□□□□□ -1.89
BEST3Q8N1M1 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.25□□□□□ -1.89
BEST3Q8N1M1 RPS3AP12-201ENST00000443616 753 ntBASIC3.25□□□□□ -1.89
BEST3Q8N1M1 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.25□□□□□ -1.89
BEST3Q8N1M1 AC093392.2-201ENST00000450682 337 ntBASIC3.25□□□□□ -1.89
BEST3Q8N1M1 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.25□□□□□ -1.89
BEST3Q8N1M1 AL136097.1-201ENST00000456945 913 ntBASIC3.25□□□□□ -1.89
BEST3Q8N1M1 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.25□□□□□ -1.89
BEST3Q8N1M1 RNU7-170P-201ENST00000459303 61 ntBASIC3.25□□□□□ -1.89
BEST3Q8N1M1 AC023598.1-201ENST00000472521 361 ntBASIC3.25□□□□□ -1.89
BEST3Q8N1M1 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.25□□□□□ -1.89
BEST3Q8N1M1 RN7SL432P-201ENST00000484057 298 ntBASIC3.25□□□□□ -1.89
BEST3Q8N1M1 AC079382.1-201ENST00000493346 557 ntBASIC3.25□□□□□ -1.89
BEST3Q8N1M1 RPL7P47-201ENST00000497299 556 ntBASIC3.25□□□□□ -1.89
BEST3Q8N1M1 HSPD1P15-201ENST00000505573 1122 ntBASIC3.25□□□□□ -1.89
BEST3Q8N1M1 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.25□□□□□ -1.89
BEST3Q8N1M1 RNU6-1092P-201ENST00000516955 87 ntBASIC3.25□□□□□ -1.89
BEST3Q8N1M1 HMGB1P41-201ENST00000520234 440 ntBASIC3.25□□□□□ -1.89
BEST3Q8N1M1 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.25□□□□□ -1.89
BEST3Q8N1M1 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC3.25□□□□□ -1.89
BEST3Q8N1M1 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.25□□□□□ -1.89
BEST3Q8N1M1 AC124947.2-202ENST00000552735 133 ntBASIC3.25□□□□□ -1.89
BEST3Q8N1M1 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.25□□□□□ -1.89
BEST3Q8N1M1 NCAPGP2-201ENST00000557911 754 ntBASIC3.25□□□□□ -1.89
BEST3Q8N1M1 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC3.25□□□□□ -1.89
BEST3Q8N1M1 AC136619.2-201ENST00000563361 631 ntBASIC3.25□□□□□ -1.89
BEST3Q8N1M1 AC055876.1-202ENST00000567053 138 ntBASIC3.25□□□□□ -1.89
BEST3Q8N1M1 MIR4738-201ENST00000579134 87 ntBASIC3.25□□□□□ -1.89
BEST3Q8N1M1 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.25□□□□□ -1.89
BEST3Q8N1M1 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.25□□□□□ -1.89
BEST3Q8N1M1 U4.5-201ENST00000617137 123 ntBASIC3.25□□□□□ -1.89
BEST3Q8N1M1 SEPT14P19-203ENST00000633205 211 ntBASIC3.25□□□□□ -1.89
BEST3Q8N1M1 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.25□□□□□ -1.89
BEST3Q8N1M1 MIR7153-201ENST00000637758 57 ntBASIC3.25□□□□□ -1.89
BEST3Q8N1M1 OR5H6-203ENST00000642105 978 ntBASIC3.25□□□□□ -1.89
BEST3Q8N1M1 AL732372.2-225ENST00000642124 456 ntBASIC3.25□□□□□ -1.89
BEST3Q8N1M1 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
BEST3Q8N1M1 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
BEST3Q8N1M1 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
BEST3Q8N1M1 AL133383.2-201ENST00000622958 2336 ntBASIC3.25□□□□□ -1.89
BEST3Q8N1M1 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.25□□□□□ -1.89
BEST3Q8N1M1 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
BEST3Q8N1M1 AL672296.1-201ENST00000427780 2158 ntBASIC3.24□□□□□ -1.89
BEST3Q8N1M1 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
BEST3Q8N1M1 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.24□□□□□ -1.89
BEST3Q8N1M1 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.24□□□□□ -1.89
BEST3Q8N1M1 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
BEST3Q8N1M1 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
BEST3Q8N1M1 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
BEST3Q8N1M1 FRG1CP-201ENST00000358464 769 ntBASIC3.24□□□□□ -1.89
BEST3Q8N1M1 RNU1-33P-201ENST00000364249 162 ntBASIC3.24□□□□□ -1.89
BEST3Q8N1M1 RNA5SP267-201ENST00000364893 126 ntBASIC3.24□□□□□ -1.89
BEST3Q8N1M1 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
BEST3Q8N1M1 MIR514A1-201ENST00000385133 98 ntBASIC3.24□□□□□ -1.89
BEST3Q8N1M1 MTCO3P40-201ENST00000392516 676 ntBASIC3.24□□□□□ -1.89
BEST3Q8N1M1 RN7SKP53-201ENST00000411337 315 ntBASIC3.24□□□□□ -1.89
BEST3Q8N1M1 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC3.24□□□□□ -1.89
BEST3Q8N1M1 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.24□□□□□ -1.89
BEST3Q8N1M1 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.24□□□□□ -1.89
BEST3Q8N1M1 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.24□□□□□ -1.89
BEST3Q8N1M1 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.24□□□□□ -1.89
BEST3Q8N1M1 ISCA1P1-201ENST00000426679 387 ntBASIC3.24□□□□□ -1.89
BEST3Q8N1M1 RPS20P5-201ENST00000434808 360 ntBASIC3.24□□□□□ -1.89
BEST3Q8N1M1 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
BEST3Q8N1M1 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.24□□□□□ -1.89
BEST3Q8N1M1 NDUFAF4P4-201ENST00000454883 502 ntBASIC3.24□□□□□ -1.89
BEST3Q8N1M1 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.24□□□□□ -1.89
BEST3Q8N1M1 U3.44-201ENST00000458938 192 ntBASIC3.24□□□□□ -1.89
BEST3Q8N1M1 SNORA70.16-201ENST00000516390 95 ntBASIC3.24□□□□□ -1.89
BEST3Q8N1M1 RNU6-314P-201ENST00000516574 104 ntBASIC3.24□□□□□ -1.89
BEST3Q8N1M1 MTND1P5-201ENST00000517906 940 ntBASIC3.24□□□□□ -1.89
BEST3Q8N1M1 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.24□□□□□ -1.89
BEST3Q8N1M1 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.24□□□□□ -1.89
BEST3Q8N1M1 AC011611.1-201ENST00000552179 197 ntBASIC3.24□□□□□ -1.89
BEST3Q8N1M1 RPS3AP4-201ENST00000555161 764 ntBASIC3.24□□□□□ -1.89
BEST3Q8N1M1 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.24□□□□□ -1.89
BEST3Q8N1M1 AC005951.2-201ENST00000576282 495 ntBASIC3.24□□□□□ -1.89
BEST3Q8N1M1 AP001029.3-201ENST00000588063 596 ntBASIC3.24□□□□□ -1.89
BEST3Q8N1M1 CR381653.2-201ENST00000624041 768 ntBASIC3.24□□□□□ -1.89
BEST3Q8N1M1 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
BEST3Q8N1M1 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.24□□□□□ -1.89
BEST3Q8N1M1 AL137003.2-201ENST00000606924 2538 ntBASIC3.24□□□□□ -1.89
BEST3Q8N1M1 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
BEST3Q8N1M1 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms