Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 RPL21P13-201ENST00000488305 481 ntBASIC5.22□□□□□ -1.57
CCDC116Q8IYX3 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC5.22□□□□□ -1.57
CCDC116Q8IYX3 RNU6-513P-201ENST00000516104 104 ntBASIC5.22□□□□□ -1.57
CCDC116Q8IYX3 RN7SKP234-201ENST00000517173 224 ntBASIC5.22□□□□□ -1.57
CCDC116Q8IYX3 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.22□□□□□ -1.57
CCDC116Q8IYX3 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.22□□□□□ -1.57
CCDC116Q8IYX3 MRPS21P7-201ENST00000566937 238 ntBASIC5.22□□□□□ -1.57
CCDC116Q8IYX3 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC5.22□□□□□ -1.57
CCDC116Q8IYX3 MIR4716-201ENST00000579628 84 ntBASIC5.22□□□□□ -1.57
CCDC116Q8IYX3 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.22□□□□□ -1.57
CCDC116Q8IYX3 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC5.22□□□□□ -1.57
CCDC116Q8IYX3 AC067852.4-201ENST00000590314 478 ntBASIC5.22□□□□□ -1.57
CCDC116Q8IYX3 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC5.22□□□□□ -1.57
CCDC116Q8IYX3 RPL7P50-201ENST00000600588 727 ntBASIC5.22□□□□□ -1.57
CCDC116Q8IYX3 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.22□□□□□ -1.57
CCDC116Q8IYX3 RPL23AP88-201ENST00000605759 454 ntBASIC5.22□□□□□ -1.57
CCDC116Q8IYX3 AC099506.2-201ENST00000623074 221 ntBASIC5.22□□□□□ -1.57
CCDC116Q8IYX3 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC116Q8IYX3 AC090971.4-201ENST00000560291 1800 ntBASIC5.22□□□□□ -1.57
CCDC116Q8IYX3 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
CCDC116Q8IYX3 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC116Q8IYX3 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
CCDC116Q8IYX3 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.22□□□□□ -1.57
CCDC116Q8IYX3 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC116Q8IYX3 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC116Q8IYX3 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
CCDC116Q8IYX3 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.21□□□□□ -1.57
CCDC116Q8IYX3 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.21□□□□□ -1.57
CCDC116Q8IYX3 AL445487.1-201ENST00000415694 1580 ntBASIC5.21□□□□□ -1.57
CCDC116Q8IYX3 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.21□□□□□ -1.57
CCDC116Q8IYX3 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.57
CCDC116Q8IYX3 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
CCDC116Q8IYX3 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.21□□□□□ -1.58
CCDC116Q8IYX3 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC116Q8IYX3 Y_RNA.262-201ENST00000364641 102 ntBASIC5.21□□□□□ -1.58
CCDC116Q8IYX3 Y_RNA.353-201ENST00000365440 108 ntBASIC5.21□□□□□ -1.58
CCDC116Q8IYX3 MIR551A-201ENST00000385042 96 ntBASIC5.21□□□□□ -1.58
CCDC116Q8IYX3 BTF3L4P2-201ENST00000392798 346 ntBASIC5.21□□□□□ -1.58
CCDC116Q8IYX3 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.21□□□□□ -1.58
CCDC116Q8IYX3 EIF4A1P3-201ENST00000411521 244 ntBASIC5.21□□□□□ -1.58
CCDC116Q8IYX3 AC119751.6-201ENST00000416712 186 ntBASIC5.21□□□□□ -1.58
CCDC116Q8IYX3 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.21□□□□□ -1.58
CCDC116Q8IYX3 AL133173.1-201ENST00000423458 397 ntBASIC5.21□□□□□ -1.58
CCDC116Q8IYX3 AC008267.6-201ENST00000441664 139 ntBASIC5.21□□□□□ -1.58
CCDC116Q8IYX3 AC005532.2-201ENST00000467154 373 ntBASIC5.21□□□□□ -1.58
CCDC116Q8IYX3 RN7SL583P-201ENST00000475692 287 ntBASIC5.21□□□□□ -1.58
CCDC116Q8IYX3 HSPE1P6-201ENST00000479457 291 ntBASIC5.21□□□□□ -1.58
CCDC116Q8IYX3 AC008694.2-201ENST00000517591 306 ntBASIC5.21□□□□□ -1.58
CCDC116Q8IYX3 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC5.21□□□□□ -1.58
CCDC116Q8IYX3 AC022968.1-201ENST00000567372 442 ntBASIC5.21□□□□□ -1.58
CCDC116Q8IYX3 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
CCDC116Q8IYX3 AC008749.1-201ENST00000597650 306 ntBASIC5.21□□□□□ -1.58
CCDC116Q8IYX3 AL353748.2-201ENST00000622148 471 ntBASIC5.21□□□□□ -1.58
CCDC116Q8IYX3 SCARNA4-201ENST00000629045 128 ntBASIC5.21□□□□□ -1.58
CCDC116Q8IYX3 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC116Q8IYX3 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC5.21□□□□□ -1.58
CCDC116Q8IYX3 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC116Q8IYX3 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC116Q8IYX3 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC116Q8IYX3 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.21□□□□□ -1.58
CCDC116Q8IYX3 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CCDC116Q8IYX3 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.21□□□□□ -1.58
CCDC116Q8IYX3 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC116Q8IYX3 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC116Q8IYX3 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
CCDC116Q8IYX3 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
CCDC116Q8IYX3 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC116Q8IYX3 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC116Q8IYX3 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC116Q8IYX3 AC083899.1-201ENST00000454465 3819 ntBASIC5.2□□□□□ -1.58
CCDC116Q8IYX3 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.2□□□□□ -1.58
CCDC116Q8IYX3 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
CCDC116Q8IYX3 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
CCDC116Q8IYX3 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC5.2□□□□□ -1.58
CCDC116Q8IYX3 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
CCDC116Q8IYX3 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC116Q8IYX3 OR13C1P-202ENST00000641378 2919 ntBASIC5.2□□□□□ -1.58
CCDC116Q8IYX3 RNA5SP46-201ENST00000362370 120 ntBASIC5.2□□□□□ -1.58
CCDC116Q8IYX3 RNU6-336P-201ENST00000364891 107 ntBASIC5.2□□□□□ -1.58
CCDC116Q8IYX3 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.2□□□□□ -1.58
CCDC116Q8IYX3 RNU6-44P-201ENST00000384045 107 ntBASIC5.2□□□□□ -1.58
CCDC116Q8IYX3 RNA5SP284-201ENST00000384547 118 ntBASIC5.2□□□□□ -1.58
CCDC116Q8IYX3 RNU6-146P-201ENST00000384602 108 ntBASIC5.2□□□□□ -1.58
CCDC116Q8IYX3 MIR186-201ENST00000384988 86 ntBASIC5.2□□□□□ -1.58
CCDC116Q8IYX3 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CCDC116Q8IYX3 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC5.2□□□□□ -1.58
CCDC116Q8IYX3 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC5.2□□□□□ -1.58
CCDC116Q8IYX3 AC064862.4-201ENST00000442180 334 ntBASIC5.2□□□□□ -1.58
CCDC116Q8IYX3 AL450023.1-201ENST00000450868 751 ntBASIC5.2□□□□□ -1.58
CCDC116Q8IYX3 ENSA-210ENST00000503241 574 ntTSL 3 BASIC5.2□□□□□ -1.58
CCDC116Q8IYX3 RNU6-941P-201ENST00000516346 108 ntBASIC5.2□□□□□ -1.58
CCDC116Q8IYX3 AL049872.1-201ENST00000556323 322 ntBASIC5.2□□□□□ -1.58
CCDC116Q8IYX3 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.2□□□□□ -1.58
CCDC116Q8IYX3 AP005403.1-201ENST00000579720 229 ntBASIC5.2□□□□□ -1.58
CCDC116Q8IYX3 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.2□□□□□ -1.58
CCDC116Q8IYX3 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC5.2□□□□□ -1.58
CCDC116Q8IYX3 MIR4512-201ENST00000583257 77 ntBASIC5.2□□□□□ -1.58
CCDC116Q8IYX3 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.2□□□□□ -1.58
CCDC116Q8IYX3 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC5.2□□□□□ -1.58
CCDC116Q8IYX3 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 134.9 ms