Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 OR4G2P-202ENST00000641004 1759 ntBASIC2.62□□□□□ -1.99
CCDC65Q8IXS2 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
CCDC65Q8IXS2 AC099786.3-201ENST00000565735 1410 ntBASIC2.62□□□□□ -1.99
CCDC65Q8IXS2 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CCDC65Q8IXS2 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
CCDC65Q8IXS2 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CCDC65Q8IXS2 AL161781.1-201ENST00000354277 403 ntBASIC2.62□□□□□ -1.99
CCDC65Q8IXS2 RNU6-289P-201ENST00000364093 107 ntBASIC2.62□□□□□ -1.99
CCDC65Q8IXS2 U3.12-201ENST00000364498 214 ntBASIC2.62□□□□□ -1.99
CCDC65Q8IXS2 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.62□□□□□ -1.99
CCDC65Q8IXS2 RNU1-52P-201ENST00000384190 164 ntBASIC2.62□□□□□ -1.99
CCDC65Q8IXS2 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CCDC65Q8IXS2 AF274854.1-201ENST00000413236 615 ntBASIC2.62□□□□□ -1.99
CCDC65Q8IXS2 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.62□□□□□ -1.99
CCDC65Q8IXS2 ELOCP9-201ENST00000418624 239 ntBASIC2.62□□□□□ -1.99
CCDC65Q8IXS2 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC2.62□□□□□ -1.99
CCDC65Q8IXS2 AC009237.8-201ENST00000445492 379 ntBASIC2.62□□□□□ -1.99
CCDC65Q8IXS2 AL513328.1-201ENST00000446460 224 ntBASIC2.62□□□□□ -1.99
CCDC65Q8IXS2 USP9YP10-201ENST00000454868 628 ntBASIC2.62□□□□□ -1.99
CCDC65Q8IXS2 MEMO1P3-201ENST00000459811 302 ntBASIC2.62□□□□□ -1.99
CCDC65Q8IXS2 AC021382.1-201ENST00000483523 359 ntBASIC2.62□□□□□ -1.99
CCDC65Q8IXS2 LINC00888-204ENST00000487386 421 ntBASIC2.62□□□□□ -1.99
CCDC65Q8IXS2 AC108729.1-201ENST00000487812 947 ntBASIC2.62□□□□□ -1.99
CCDC65Q8IXS2 AL049874.1-201ENST00000489560 388 ntBASIC2.62□□□□□ -1.99
CCDC65Q8IXS2 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.62□□□□□ -1.99
CCDC65Q8IXS2 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.62□□□□□ -1.99
CCDC65Q8IXS2 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.62□□□□□ -1.99
CCDC65Q8IXS2 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC2.62□□□□□ -1.99
CCDC65Q8IXS2 AC005951.2-201ENST00000576282 495 ntBASIC2.62□□□□□ -1.99
CCDC65Q8IXS2 UBE2L4-201ENST00000587688 464 ntBASIC2.62□□□□□ -1.99
CCDC65Q8IXS2 TPMTP1-201ENST00000592307 737 ntBASIC2.62□□□□□ -1.99
CCDC65Q8IXS2 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.62□□□□□ -1.99
CCDC65Q8IXS2 RPP40P2-201ENST00000603596 712 ntBASIC2.62□□□□□ -1.99
CCDC65Q8IXS2 AC103710.4-201ENST00000609301 899 ntBASIC2.62□□□□□ -1.99
CCDC65Q8IXS2 AC245884.12-201ENST00000615364 59 ntBASIC2.62□□□□□ -1.99
CCDC65Q8IXS2 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC2.62□□□□□ -1.99
CCDC65Q8IXS2 AL158801.5-201ENST00000623123 465 ntBASIC2.62□□□□□ -1.99
CCDC65Q8IXS2 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.62□□□□□ -1.99
CCDC65Q8IXS2 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.62□□□□□ -1.99
CCDC65Q8IXS2 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
CCDC65Q8IXS2 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CCDC65Q8IXS2 RNU1-51P-201ENST00000365345 176 ntBASIC2.61□□□□□ -1.99
CCDC65Q8IXS2 RNU6-744P-201ENST00000365557 107 ntBASIC2.61□□□□□ -1.99
CCDC65Q8IXS2 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.61□□□□□ -1.99
CCDC65Q8IXS2 RNU6-1316P-201ENST00000384242 108 ntBASIC2.61□□□□□ -1.99
CCDC65Q8IXS2 RNU6-114P-201ENST00000384704 105 ntBASIC2.61□□□□□ -1.99
CCDC65Q8IXS2 MIR325-201ENST00000385260 98 ntBASIC2.61□□□□□ -1.99
CCDC65Q8IXS2 MIR1290-201ENST00000408735 78 ntBASIC2.61□□□□□ -1.99
CCDC65Q8IXS2 AL513331.1-201ENST00000411908 397 ntBASIC2.61□□□□□ -1.99
CCDC65Q8IXS2 MTCO2P8-201ENST00000412213 658 ntBASIC2.61□□□□□ -1.99
CCDC65Q8IXS2 USP9YP33-201ENST00000412220 421 ntBASIC2.61□□□□□ -1.99
CCDC65Q8IXS2 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC2.61□□□□□ -1.99
CCDC65Q8IXS2 AL365496.1-201ENST00000426885 215 ntBASIC2.61□□□□□ -1.99
CCDC65Q8IXS2 TXNL1P1-201ENST00000429528 554 ntBASIC2.61□□□□□ -1.99
CCDC65Q8IXS2 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.61□□□□□ -1.99
CCDC65Q8IXS2 USP9YP35-201ENST00000435696 412 ntBASIC2.61□□□□□ -1.99
CCDC65Q8IXS2 SDR42E1P3-201ENST00000438345 502 ntBASIC2.61□□□□□ -1.99
CCDC65Q8IXS2 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC2.61□□□□□ -1.99
CCDC65Q8IXS2 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.61□□□□□ -1.99
CCDC65Q8IXS2 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.61□□□□□ -1.99
CCDC65Q8IXS2 USP9YP25-201ENST00000457708 443 ntBASIC2.61□□□□□ -1.99
CCDC65Q8IXS2 AC092798.1-201ENST00000458542 409 ntBASIC2.61□□□□□ -1.99
CCDC65Q8IXS2 LARP1BP2-201ENST00000486594 519 ntBASIC2.61□□□□□ -1.99
CCDC65Q8IXS2 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.61□□□□□ -1.99
CCDC65Q8IXS2 RN7SL636P-201ENST00000497504 294 ntBASIC2.61□□□□□ -1.99
CCDC65Q8IXS2 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.61□□□□□ -1.99
CCDC65Q8IXS2 AC147055.4-201ENST00000504399 745 ntBASIC2.61□□□□□ -1.99
CCDC65Q8IXS2 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.61□□□□□ -1.99
CCDC65Q8IXS2 AC114781.4-201ENST00000513707 639 ntBASIC2.61□□□□□ -1.99
CCDC65Q8IXS2 RNU1-103P-201ENST00000516502 125 ntBASIC2.61□□□□□ -1.99
CCDC65Q8IXS2 RNU6-1256P-201ENST00000516539 103 ntBASIC2.61□□□□□ -1.99
CCDC65Q8IXS2 RNU6-928P-201ENST00000516876 104 ntBASIC2.61□□□□□ -1.99
CCDC65Q8IXS2 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.61□□□□□ -1.99
CCDC65Q8IXS2 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.61□□□□□ -1.99
CCDC65Q8IXS2 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.61□□□□□ -1.99
CCDC65Q8IXS2 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.61□□□□□ -1.99
CCDC65Q8IXS2 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CCDC65Q8IXS2 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC2.61□□□□□ -1.99
CCDC65Q8IXS2 PRELID2P1-201ENST00000552837 301 ntBASIC2.61□□□□□ -1.99
CCDC65Q8IXS2 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.61□□□□□ -1.99
CCDC65Q8IXS2 AC009712.1-201ENST00000564938 316 ntBASIC2.61□□□□□ -1.99
CCDC65Q8IXS2 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC2.61□□□□□ -1.99
CCDC65Q8IXS2 AC105137.2-201ENST00000569073 466 ntBASIC2.61□□□□□ -1.99
CCDC65Q8IXS2 AC022662.1-201ENST00000580252 331 ntBASIC2.61□□□□□ -1.99
CCDC65Q8IXS2 MIR5694-201ENST00000581190 76 ntBASIC2.61□□□□□ -1.99
CCDC65Q8IXS2 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC2.61□□□□□ -1.99
CCDC65Q8IXS2 OR1M4P-201ENST00000589199 287 ntBASIC2.61□□□□□ -1.99
CCDC65Q8IXS2 RPS15AP11-201ENST00000594193 385 ntBASIC2.61□□□□□ -1.99
CCDC65Q8IXS2 AL356280.1-201ENST00000603614 379 ntBASIC2.61□□□□□ -1.99
CCDC65Q8IXS2 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC2.61□□□□□ -1.99
CCDC65Q8IXS2 MTCO1P9-201ENST00000505577 1534 ntBASIC2.61□□□□□ -1.99
CCDC65Q8IXS2 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.61□□□□□ -1.99
CCDC65Q8IXS2 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.6□□□□□ -1.99
CCDC65Q8IXS2 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.6□□□□□ -1.99
CCDC65Q8IXS2 AC005832.2-201ENST00000538921 1430 ntBASIC2.6□□□□□ -1.99
CCDC65Q8IXS2 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
CCDC65Q8IXS2 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CCDC65Q8IXS2 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CCDC65Q8IXS2 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.6□□□□□ -1.99
CCDC65Q8IXS2 SDAD1P2-201ENST00000441308 2028 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms