Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.59□□□□□ -1.99
C9orf40Q8IXQ3 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.59□□□□□ -1.99
C9orf40Q8IXQ3 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.59□□□□□ -1.99
C9orf40Q8IXQ3 RNU7-59P-201ENST00000459101 61 ntBASIC2.59□□□□□ -1.99
C9orf40Q8IXQ3 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
C9orf40Q8IXQ3 AC003982.1-202ENST00000469928 248 ntBASIC2.59□□□□□ -1.99
C9orf40Q8IXQ3 RPL23AP41-201ENST00000484754 458 ntBASIC2.59□□□□□ -1.99
C9orf40Q8IXQ3 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
C9orf40Q8IXQ3 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
C9orf40Q8IXQ3 AC117522.3-201ENST00000507974 584 ntBASIC2.59□□□□□ -1.99
C9orf40Q8IXQ3 RNU6-1003P-201ENST00000517099 105 ntBASIC2.59□□□□□ -1.99
C9orf40Q8IXQ3 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
C9orf40Q8IXQ3 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.59□□□□□ -1.99
C9orf40Q8IXQ3 HPRT1P3-201ENST00000539521 576 ntBASIC2.59□□□□□ -1.99
C9orf40Q8IXQ3 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC2.59□□□□□ -1.99
C9orf40Q8IXQ3 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC2.59□□□□□ -1.99
C9orf40Q8IXQ3 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC2.59□□□□□ -1.99
C9orf40Q8IXQ3 AL163153.1-201ENST00000554223 283 ntBASIC2.59□□□□□ -1.99
C9orf40Q8IXQ3 AL355836.1-201ENST00000555951 870 ntBASIC2.59□□□□□ -1.99
C9orf40Q8IXQ3 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.59□□□□□ -1.99
C9orf40Q8IXQ3 AC005951.2-201ENST00000576282 495 ntBASIC2.59□□□□□ -1.99
C9orf40Q8IXQ3 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC2.59□□□□□ -1.99
C9orf40Q8IXQ3 AL133393.1-201ENST00000603277 287 ntBASIC2.59□□□□□ -1.99
C9orf40Q8IXQ3 AL627309.6-201ENST00000606857 840 ntBASIC2.59□□□□□ -1.99
C9orf40Q8IXQ3 AL355472.4-201ENST00000610233 626 ntBASIC2.59□□□□□ -1.99
C9orf40Q8IXQ3 MIR7106-201ENST00000612419 65 ntBASIC2.59□□□□□ -1.99
C9orf40Q8IXQ3 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
C9orf40Q8IXQ3 AC007494.3-201ENST00000624660 743 ntBASIC2.59□□□□□ -1.99
C9orf40Q8IXQ3 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.59□□□□□ -1.99
C9orf40Q8IXQ3 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.59□□□□□ -2
C9orf40Q8IXQ3 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.59□□□□□ -2
C9orf40Q8IXQ3 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.59□□□□□ -2
C9orf40Q8IXQ3 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.59□□□□□ -2
C9orf40Q8IXQ3 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.58□□□□□ -2
C9orf40Q8IXQ3 OR5J1P-201ENST00000313544 939 ntBASIC2.58□□□□□ -2
C9orf40Q8IXQ3 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.58□□□□□ -2
C9orf40Q8IXQ3 RNU6-7-201ENST00000364784 107 ntBASIC2.58□□□□□ -2
C9orf40Q8IXQ3 RNU6-8-201ENST00000365467 107 ntBASIC2.58□□□□□ -2
C9orf40Q8IXQ3 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.58□□□□□ -2
C9orf40Q8IXQ3 RPL17P50-201ENST00000396131 546 ntBASIC2.58□□□□□ -2
C9orf40Q8IXQ3 RPS20P2-201ENST00000402520 389 ntBASIC2.58□□□□□ -2
C9orf40Q8IXQ3 TXNP7-201ENST00000406296 293 ntBASIC2.58□□□□□ -2
C9orf40Q8IXQ3 MRPL50P2-201ENST00000416821 482 ntBASIC2.58□□□□□ -2
C9orf40Q8IXQ3 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.58□□□□□ -2
C9orf40Q8IXQ3 NDUFB4P7-201ENST00000423198 363 ntBASIC2.58□□□□□ -2
C9orf40Q8IXQ3 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.58□□□□□ -2
C9orf40Q8IXQ3 AC092573.2-201ENST00000434546 243 ntBASIC2.58□□□□□ -2
C9orf40Q8IXQ3 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC2.58□□□□□ -2
C9orf40Q8IXQ3 AL513043.1-201ENST00000439124 535 ntBASIC2.58□□□□□ -2
C9orf40Q8IXQ3 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.58□□□□□ -2
C9orf40Q8IXQ3 MTND1P30-201ENST00000441241 901 ntBASIC2.58□□□□□ -2
C9orf40Q8IXQ3 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC2.58□□□□□ -2
C9orf40Q8IXQ3 AC118469.1-201ENST00000442943 488 ntBASIC2.58□□□□□ -2
C9orf40Q8IXQ3 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.58□□□□□ -2
C9orf40Q8IXQ3 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.58□□□□□ -2
C9orf40Q8IXQ3 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.58□□□□□ -2
C9orf40Q8IXQ3 EPS15P1-201ENST00000448836 336 ntBASIC2.58□□□□□ -2
C9orf40Q8IXQ3 KATNBL1P6-201ENST00000453433 915 ntBASIC2.58□□□□□ -2
C9orf40Q8IXQ3 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.58□□□□□ -2
C9orf40Q8IXQ3 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.58□□□□□ -2
C9orf40Q8IXQ3 SETP11-201ENST00000473027 690 ntBASIC2.58□□□□□ -2
C9orf40Q8IXQ3 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.58□□□□□ -2
C9orf40Q8IXQ3 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.58□□□□□ -2
C9orf40Q8IXQ3 AF131216.2-201ENST00000512316 564 ntBASIC2.58□□□□□ -2
C9orf40Q8IXQ3 RN7SKP132-201ENST00000516001 208 ntBASIC2.58□□□□□ -2
C9orf40Q8IXQ3 SCARNA15.2-201ENST00000516409 127 ntBASIC2.58□□□□□ -2
C9orf40Q8IXQ3 RNU6-1256P-201ENST00000516539 103 ntBASIC2.58□□□□□ -2
C9orf40Q8IXQ3 AC106038.2-201ENST00000520706 568 ntBASIC2.58□□□□□ -2
C9orf40Q8IXQ3 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC2.58□□□□□ -2
C9orf40Q8IXQ3 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.58□□□□□ -2
C9orf40Q8IXQ3 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.58□□□□□ -2
C9orf40Q8IXQ3 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.58□□□□□ -2
C9orf40Q8IXQ3 RPL23AP84-201ENST00000571193 464 ntBASIC2.58□□□□□ -2
C9orf40Q8IXQ3 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.58□□□□□ -2
C9orf40Q8IXQ3 MIR3915-201ENST00000578518 97 ntBASIC2.58□□□□□ -2
C9orf40Q8IXQ3 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.58□□□□□ -2
C9orf40Q8IXQ3 AF038458.1-201ENST00000588406 262 ntBASIC2.58□□□□□ -2
C9orf40Q8IXQ3 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.58□□□□□ -2
C9orf40Q8IXQ3 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.58□□□□□ -2
C9orf40Q8IXQ3 AC107871.2-201ENST00000612894 502 ntBASIC2.58□□□□□ -2
C9orf40Q8IXQ3 AC090132.2-201ENST00000615881 347 ntBASIC2.58□□□□□ -2
C9orf40Q8IXQ3 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.58□□□□□ -2
C9orf40Q8IXQ3 MIR6076-201ENST00000617521 113 ntBASIC2.58□□□□□ -2
C9orf40Q8IXQ3 Z99129.2-201ENST00000619967 314 ntBASIC2.58□□□□□ -2
C9orf40Q8IXQ3 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.58□□□□□ -2
C9orf40Q8IXQ3 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
C9orf40Q8IXQ3 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
C9orf40Q8IXQ3 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.57□□□□□ -2
C9orf40Q8IXQ3 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.57□□□□□ -2
C9orf40Q8IXQ3 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
C9orf40Q8IXQ3 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.57□□□□□ -2
C9orf40Q8IXQ3 RPL9P7-201ENST00000330965 580 ntBASIC2.57□□□□□ -2
C9orf40Q8IXQ3 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
C9orf40Q8IXQ3 SNORA1.3-201ENST00000384676 136 ntBASIC2.57□□□□□ -2
C9orf40Q8IXQ3 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.57□□□□□ -2
C9orf40Q8IXQ3 U3.26-201ENST00000391236 204 ntBASIC2.57□□□□□ -2
C9orf40Q8IXQ3 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
C9orf40Q8IXQ3 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.57□□□□□ -2
C9orf40Q8IXQ3 AL590383.1-201ENST00000428602 75 ntBASIC2.57□□□□□ -2
C9orf40Q8IXQ3 MED14P1-201ENST00000430517 648 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 126.9 ms