Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC5.69□□□□□ -1.5
SCUBE3Q8IX30 RPL12P3-201ENST00000440080 396 ntBASIC5.69□□□□□ -1.5
SCUBE3Q8IX30 GAPDHP25-201ENST00000447061 1001 ntBASIC5.69□□□□□ -1.5
SCUBE3Q8IX30 NUTF2P7-201ENST00000453086 375 ntBASIC5.69□□□□□ -1.5
SCUBE3Q8IX30 RPS4XP22-201ENST00000480755 780 ntBASIC5.69□□□□□ -1.5
SCUBE3Q8IX30 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.69□□□□□ -1.5
SCUBE3Q8IX30 TGIF1P1-201ENST00000558095 802 ntBASIC5.69□□□□□ -1.5
SCUBE3Q8IX30 AC011487.3-201ENST00000593607 453 ntBASIC5.69□□□□□ -1.5
SCUBE3Q8IX30 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SCUBE3Q8IX30 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.69□□□□□ -1.5
SCUBE3Q8IX30 AC107294.1-201ENST00000609524 467 ntBASIC5.69□□□□□ -1.5
SCUBE3Q8IX30 Mico1.1-201ENST00000611698 204 ntBASIC5.69□□□□□ -1.5
SCUBE3Q8IX30 AC068870.2-201ENST00000620635 389 ntBASIC5.69□□□□□ -1.5
SCUBE3Q8IX30 MIR6837-201ENST00000620884 64 ntBASIC5.69□□□□□ -1.5
SCUBE3Q8IX30 AC090617.7-201ENST00000623952 126 ntBASIC5.69□□□□□ -1.5
SCUBE3Q8IX30 AL596275.2-206ENST00000641957 626 ntBASIC5.69□□□□□ -1.5
SCUBE3Q8IX30 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SCUBE3Q8IX30 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SCUBE3Q8IX30 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SCUBE3Q8IX30 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SCUBE3Q8IX30 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SCUBE3Q8IX30 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SCUBE3Q8IX30 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.68□□□□□ -1.5
SCUBE3Q8IX30 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
SCUBE3Q8IX30 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SCUBE3Q8IX30 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
SCUBE3Q8IX30 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SCUBE3Q8IX30 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
SCUBE3Q8IX30 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SCUBE3Q8IX30 AC004656.1-201ENST00000568479 4951 ntBASIC5.68□□□□□ -1.5
SCUBE3Q8IX30 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SCUBE3Q8IX30 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
SCUBE3Q8IX30 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SCUBE3Q8IX30 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SCUBE3Q8IX30 MIR133B-201ENST00000362210 119 ntBASIC5.68□□□□□ -1.5
SCUBE3Q8IX30 RNU6-428P-201ENST00000362942 107 ntBASIC5.68□□□□□ -1.5
SCUBE3Q8IX30 RNU6-151P-201ENST00000364158 107 ntBASIC5.68□□□□□ -1.5
SCUBE3Q8IX30 RNU4-56P-201ENST00000364700 142 ntBASIC5.68□□□□□ -1.5
SCUBE3Q8IX30 MIR223-201ENST00000385204 110 ntBASIC5.68□□□□□ -1.5
SCUBE3Q8IX30 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SCUBE3Q8IX30 AC009804.1-201ENST00000400949 179 ntBASIC5.68□□□□□ -1.5
SCUBE3Q8IX30 AP000907.1-201ENST00000428428 510 ntBASIC5.68□□□□□ -1.5
SCUBE3Q8IX30 CYCSP6-201ENST00000434498 302 ntBASIC5.68□□□□□ -1.5
SCUBE3Q8IX30 CR769767.1-201ENST00000436337 346 ntBASIC5.68□□□□□ -1.5
SCUBE3Q8IX30 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
SCUBE3Q8IX30 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.68□□□□□ -1.5
SCUBE3Q8IX30 AC005532.2-201ENST00000467154 373 ntBASIC5.68□□□□□ -1.5
SCUBE3Q8IX30 AC117440.1-201ENST00000474107 571 ntBASIC5.68□□□□□ -1.5
SCUBE3Q8IX30 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC5.68□□□□□ -1.5
SCUBE3Q8IX30 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC5.68□□□□□ -1.5
SCUBE3Q8IX30 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.68□□□□□ -1.5
SCUBE3Q8IX30 AC010928.2-201ENST00000588017 287 ntBASIC5.68□□□□□ -1.5
SCUBE3Q8IX30 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.68□□□□□ -1.5
SCUBE3Q8IX30 FKBP1AP1-201ENST00000594588 318 ntBASIC5.68□□□□□ -1.5
SCUBE3Q8IX30 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC5.68□□□□□ -1.5
SCUBE3Q8IX30 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SCUBE3Q8IX30 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SCUBE3Q8IX30 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SCUBE3Q8IX30 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.68□□□□□ -1.5
SCUBE3Q8IX30 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SCUBE3Q8IX30 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.68□□□□□ -1.5
SCUBE3Q8IX30 LINC01109-201ENST00000603837 3081 ntBASIC5.68□□□□□ -1.5
SCUBE3Q8IX30 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
SCUBE3Q8IX30 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
SCUBE3Q8IX30 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.67□□□□□ -1.5
SCUBE3Q8IX30 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.67□□□□□ -1.5
SCUBE3Q8IX30 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SCUBE3Q8IX30 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.67□□□□□ -1.5
SCUBE3Q8IX30 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
SCUBE3Q8IX30 RNU6-1298P-201ENST00000362456 101 ntBASIC5.67□□□□□ -1.5
SCUBE3Q8IX30 RNU6-653P-201ENST00000363074 106 ntBASIC5.67□□□□□ -1.5
SCUBE3Q8IX30 MIR550A3-201ENST00000390735 95 ntBASIC5.67□□□□□ -1.5
SCUBE3Q8IX30 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.67□□□□□ -1.5
SCUBE3Q8IX30 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.67□□□□□ -1.5
SCUBE3Q8IX30 BX276092.6-201ENST00000430476 250 ntBASIC5.67□□□□□ -1.5
SCUBE3Q8IX30 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC5.67□□□□□ -1.5
SCUBE3Q8IX30 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC5.67□□□□□ -1.5
SCUBE3Q8IX30 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC5.67□□□□□ -1.5
SCUBE3Q8IX30 BX276092.8-201ENST00000455722 250 ntBASIC5.67□□□□□ -1.5
SCUBE3Q8IX30 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SCUBE3Q8IX30 RNU6-377P-201ENST00000515965 102 ntBASIC5.67□□□□□ -1.5
SCUBE3Q8IX30 SNORA72.7-201ENST00000516349 94 ntBASIC5.67□□□□□ -1.5
SCUBE3Q8IX30 RNA5SP471-201ENST00000516971 106 ntBASIC5.67□□□□□ -1.5
SCUBE3Q8IX30 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC5.67□□□□□ -1.5
SCUBE3Q8IX30 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC5.67□□□□□ -1.5
SCUBE3Q8IX30 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.67□□□□□ -1.5
SCUBE3Q8IX30 MIR548X2-201ENST00000579776 100 ntBASIC5.67□□□□□ -1.5
SCUBE3Q8IX30 AC109583.2-201ENST00000617367 129 ntBASIC5.67□□□□□ -1.5
SCUBE3Q8IX30 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.67□□□□□ -1.5
SCUBE3Q8IX30 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SCUBE3Q8IX30 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
SCUBE3Q8IX30 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.67□□□□□ -1.5
SCUBE3Q8IX30 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SCUBE3Q8IX30 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.67□□□□□ -1.5
SCUBE3Q8IX30 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SCUBE3Q8IX30 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SCUBE3Q8IX30 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
SCUBE3Q8IX30 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
SCUBE3Q8IX30 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
SCUBE3Q8IX30 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 133.9 ms