Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.72□□□□□ -1.81
HERC6Q8IVU3 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.72□□□□□ -1.81
HERC6Q8IVU3 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC3.72□□□□□ -1.81
HERC6Q8IVU3 AC012213.3-201ENST00000577199 777 ntBASIC3.72□□□□□ -1.81
HERC6Q8IVU3 AC087683.1-201ENST00000591187 441 ntBASIC3.72□□□□□ -1.81
HERC6Q8IVU3 AC015871.2-201ENST00000603605 948 ntBASIC3.72□□□□□ -1.81
HERC6Q8IVU3 AC103710.3-201ENST00000608157 948 ntBASIC3.72□□□□□ -1.81
HERC6Q8IVU3 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.72□□□□□ -1.81
HERC6Q8IVU3 AC122108.2-201ENST00000611946 526 ntBASIC3.72□□□□□ -1.81
HERC6Q8IVU3 AL589743.7-201ENST00000612637 233 ntBASIC3.72□□□□□ -1.81
HERC6Q8IVU3 AL390240.1-201ENST00000612950 384 ntBASIC3.72□□□□□ -1.81
HERC6Q8IVU3 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HERC6Q8IVU3 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC3.72□□□□□ -1.81
HERC6Q8IVU3 AC004944.1-201ENST00000517807 3059 ntBASIC3.72□□□□□ -1.81
HERC6Q8IVU3 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
HERC6Q8IVU3 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.72□□□□□ -1.81
HERC6Q8IVU3 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.72□□□□□ -1.81
HERC6Q8IVU3 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HERC6Q8IVU3 AL035425.3-201ENST00000564206 4996 ntBASIC3.72□□□□□ -1.81
HERC6Q8IVU3 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.72□□□□□ -1.81
HERC6Q8IVU3 AL356274.2-201ENST00000624379 3752 ntBASIC3.72□□□□□ -1.81
HERC6Q8IVU3 CEP170P1-201ENST00000502249 4587 ntBASIC3.71□□□□□ -1.81
HERC6Q8IVU3 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
HERC6Q8IVU3 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.81
HERC6Q8IVU3 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
HERC6Q8IVU3 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HERC6Q8IVU3 SNORD56.2-201ENST00000363242 71 ntBASIC3.71□□□□□ -1.82
HERC6Q8IVU3 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.71□□□□□ -1.82
HERC6Q8IVU3 RPL5P18-201ENST00000406671 891 ntBASIC3.71□□□□□ -1.82
HERC6Q8IVU3 MTCO3P41-201ENST00000414801 328 ntBASIC3.71□□□□□ -1.82
HERC6Q8IVU3 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.71□□□□□ -1.82
HERC6Q8IVU3 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.71□□□□□ -1.82
HERC6Q8IVU3 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.71□□□□□ -1.82
HERC6Q8IVU3 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.71□□□□□ -1.82
HERC6Q8IVU3 HMGB1P27-201ENST00000431429 603 ntBASIC3.71□□□□□ -1.82
HERC6Q8IVU3 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.71□□□□□ -1.82
HERC6Q8IVU3 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.71□□□□□ -1.82
HERC6Q8IVU3 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.71□□□□□ -1.82
HERC6Q8IVU3 AC140076.1-201ENST00000449897 361 ntBASIC3.71□□□□□ -1.82
HERC6Q8IVU3 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.71□□□□□ -1.82
HERC6Q8IVU3 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.71□□□□□ -1.82
HERC6Q8IVU3 KCTD9P5-201ENST00000504141 1170 ntBASIC3.71□□□□□ -1.82
HERC6Q8IVU3 AC097462.2-201ENST00000504623 481 ntBASIC3.71□□□□□ -1.82
HERC6Q8IVU3 AC010493.1-201ENST00000513479 292 ntBASIC3.71□□□□□ -1.82
HERC6Q8IVU3 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.71□□□□□ -1.82
HERC6Q8IVU3 NRON-201ENST00000517270 370 ntBASIC3.71□□□□□ -1.82
HERC6Q8IVU3 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.71□□□□□ -1.82
HERC6Q8IVU3 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.71□□□□□ -1.82
HERC6Q8IVU3 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.71□□□□□ -1.82
HERC6Q8IVU3 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC3.71□□□□□ -1.82
HERC6Q8IVU3 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.71□□□□□ -1.82
HERC6Q8IVU3 MIR3913-1-201ENST00000577744 102 ntBASIC3.71□□□□□ -1.82
HERC6Q8IVU3 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.71□□□□□ -1.82
HERC6Q8IVU3 KLKP1-201ENST00000595979 403 ntBASIC3.71□□□□□ -1.82
HERC6Q8IVU3 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.71□□□□□ -1.82
HERC6Q8IVU3 MIR98-201ENST00000606724 119 ntBASIC3.71□□□□□ -1.82
HERC6Q8IVU3 AC103591.3-201ENST00000608684 209 ntBASIC3.71□□□□□ -1.82
HERC6Q8IVU3 AC091834.1-201ENST00000614543 472 ntBASIC3.71□□□□□ -1.82
HERC6Q8IVU3 AC002076.2-201ENST00000617362 122 ntBASIC3.71□□□□□ -1.82
HERC6Q8IVU3 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.71□□□□□ -1.82
HERC6Q8IVU3 AL136164.4-201ENST00000625013 2135 ntBASIC3.71□□□□□ -1.82
HERC6Q8IVU3 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
HERC6Q8IVU3 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.7□□□□□ -1.82
HERC6Q8IVU3 TPTE2P4-201ENST00000258589 1605 ntBASIC3.7□□□□□ -1.82
HERC6Q8IVU3 AC007256.1-201ENST00000392253 2765 ntBASIC3.7□□□□□ -1.82
HERC6Q8IVU3 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.7□□□□□ -1.82
HERC6Q8IVU3 AL137003.2-201ENST00000606924 2538 ntBASIC3.7□□□□□ -1.82
HERC6Q8IVU3 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.7□□□□□ -1.82
HERC6Q8IVU3 AC073343.1-201ENST00000328239 651 ntBASIC3.7□□□□□ -1.82
HERC6Q8IVU3 RNU4-75P-201ENST00000364621 146 ntBASIC3.7□□□□□ -1.82
HERC6Q8IVU3 SNORA1.3-201ENST00000384676 136 ntBASIC3.7□□□□□ -1.82
HERC6Q8IVU3 U3.42-201ENST00000408746 214 ntBASIC3.7□□□□□ -1.82
HERC6Q8IVU3 RNU2-16P-201ENST00000410712 136 ntBASIC3.7□□□□□ -1.82
HERC6Q8IVU3 RNU4-47P-201ENST00000410876 114 ntBASIC3.7□□□□□ -1.82
HERC6Q8IVU3 BX295541.1-201ENST00000417774 250 ntBASIC3.7□□□□□ -1.82
HERC6Q8IVU3 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.7□□□□□ -1.82
HERC6Q8IVU3 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.7□□□□□ -1.82
HERC6Q8IVU3 AL451054.2-201ENST00000420896 202 ntBASIC3.7□□□□□ -1.82
HERC6Q8IVU3 AL353678.1-201ENST00000422735 741 ntBASIC3.7□□□□□ -1.82
HERC6Q8IVU3 AC002075.2-201ENST00000425207 252 ntBASIC3.7□□□□□ -1.82
HERC6Q8IVU3 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
HERC6Q8IVU3 AC104850.1-201ENST00000435940 476 ntBASIC3.7□□□□□ -1.82
HERC6Q8IVU3 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.7□□□□□ -1.82
HERC6Q8IVU3 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.7□□□□□ -1.82
HERC6Q8IVU3 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.7□□□□□ -1.82
HERC6Q8IVU3 AC020550.1-201ENST00000447385 163 ntBASIC3.7□□□□□ -1.82
HERC6Q8IVU3 NANOGNBP1-201ENST00000448444 480 ntBASIC3.7□□□□□ -1.82
HERC6Q8IVU3 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.7□□□□□ -1.82
HERC6Q8IVU3 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.7□□□□□ -1.82
HERC6Q8IVU3 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.7□□□□□ -1.82
HERC6Q8IVU3 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.7□□□□□ -1.82
HERC6Q8IVU3 RPL30P5-201ENST00000494923 336 ntBASIC3.7□□□□□ -1.82
HERC6Q8IVU3 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.7□□□□□ -1.82
HERC6Q8IVU3 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.7□□□□□ -1.82
HERC6Q8IVU3 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.7□□□□□ -1.82
HERC6Q8IVU3 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.7□□□□□ -1.82
HERC6Q8IVU3 RNU6-1256P-201ENST00000516539 103 ntBASIC3.7□□□□□ -1.82
HERC6Q8IVU3 RNU6-405P-201ENST00000516637 110 ntBASIC3.7□□□□□ -1.82
HERC6Q8IVU3 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.7□□□□□ -1.82
HERC6Q8IVU3 MTCO2P4-201ENST00000517968 247 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms