Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 AC112484.5-201ENST00000624189 228 ntBASIC3.94□□□□□ -1.78
VRK3Q8IV63 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.94□□□□□ -1.78
VRK3Q8IV63 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.94□□□□□ -1.78
VRK3Q8IV63 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.94□□□□□ -1.78
VRK3Q8IV63 AC107027.3-201ENST00000565095 3473 ntBASIC3.94□□□□□ -1.78
VRK3Q8IV63 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
VRK3Q8IV63 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
VRK3Q8IV63 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
VRK3Q8IV63 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.94□□□□□ -1.78
VRK3Q8IV63 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.94□□□□□ -1.78
VRK3Q8IV63 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.94□□□□□ -1.78
VRK3Q8IV63 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.93□□□□□ -1.78
VRK3Q8IV63 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.93□□□□□ -1.78
VRK3Q8IV63 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.93□□□□□ -1.78
VRK3Q8IV63 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
VRK3Q8IV63 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
VRK3Q8IV63 AC244517.1-201ENST00000606030 2086 ntBASIC3.93□□□□□ -1.78
VRK3Q8IV63 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
VRK3Q8IV63 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
VRK3Q8IV63 RNU6-61P-201ENST00000365528 109 ntBASIC3.93□□□□□ -1.78
VRK3Q8IV63 SNORD82-201ENST00000365530 70 ntBASIC3.93□□□□□ -1.78
VRK3Q8IV63 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
VRK3Q8IV63 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
VRK3Q8IV63 RNU6-784P-201ENST00000384330 106 ntBASIC3.93□□□□□ -1.78
VRK3Q8IV63 RNU6-505P-201ENST00000384427 107 ntBASIC3.93□□□□□ -1.78
VRK3Q8IV63 RNU6-310P-201ENST00000384655 107 ntBASIC3.93□□□□□ -1.78
VRK3Q8IV63 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
VRK3Q8IV63 EIF4E2P1-201ENST00000393781 255 ntBASIC3.93□□□□□ -1.78
VRK3Q8IV63 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.93□□□□□ -1.78
VRK3Q8IV63 POLHP1-201ENST00000411806 470 ntBASIC3.93□□□□□ -1.78
VRK3Q8IV63 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.93□□□□□ -1.78
VRK3Q8IV63 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.93□□□□□ -1.78
VRK3Q8IV63 AL139396.1-201ENST00000421137 167 ntBASIC3.93□□□□□ -1.78
VRK3Q8IV63 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.93□□□□□ -1.78
VRK3Q8IV63 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.93□□□□□ -1.78
VRK3Q8IV63 ELOCP18-201ENST00000434209 337 ntBASIC3.93□□□□□ -1.78
VRK3Q8IV63 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.93□□□□□ -1.78
VRK3Q8IV63 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC3.93□□□□□ -1.78
VRK3Q8IV63 NUTF2P7-201ENST00000453086 375 ntBASIC3.93□□□□□ -1.78
VRK3Q8IV63 RPL30P15-201ENST00000457129 321 ntBASIC3.93□□□□□ -1.78
VRK3Q8IV63 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3.93□□□□□ -1.78
VRK3Q8IV63 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.93□□□□□ -1.78
VRK3Q8IV63 AC022034.3-201ENST00000471393 478 ntBASIC3.93□□□□□ -1.78
VRK3Q8IV63 RPL21P93-201ENST00000480465 489 ntBASIC3.93□□□□□ -1.78
VRK3Q8IV63 RPL31P61-201ENST00000496160 376 ntBASIC3.93□□□□□ -1.78
VRK3Q8IV63 RPS27P27-201ENST00000498779 255 ntBASIC3.93□□□□□ -1.78
VRK3Q8IV63 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.93□□□□□ -1.78
VRK3Q8IV63 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC3.93□□□□□ -1.78
VRK3Q8IV63 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.93□□□□□ -1.78
VRK3Q8IV63 RNU6-273P-201ENST00000516937 96 ntBASIC3.93□□□□□ -1.78
VRK3Q8IV63 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.93□□□□□ -1.78
VRK3Q8IV63 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.93□□□□□ -1.78
VRK3Q8IV63 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.93□□□□□ -1.78
VRK3Q8IV63 AC092470.1-201ENST00000546187 132 ntBASIC3.93□□□□□ -1.78
VRK3Q8IV63 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.93□□□□□ -1.78
VRK3Q8IV63 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.93□□□□□ -1.78
VRK3Q8IV63 AL133153.1-201ENST00000557756 303 ntBASIC3.93□□□□□ -1.78
VRK3Q8IV63 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC3.93□□□□□ -1.78
VRK3Q8IV63 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.93□□□□□ -1.78
VRK3Q8IV63 AL669831.4-202ENST00000590817 238 ntBASIC3.93□□□□□ -1.78
VRK3Q8IV63 AC103705.1-201ENST00000619013 241 ntBASIC3.93□□□□□ -1.78
VRK3Q8IV63 AL357559.1-201ENST00000622228 274 ntBASIC3.93□□□□□ -1.78
VRK3Q8IV63 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.93□□□□□ -1.78
VRK3Q8IV63 RNA5SP196-201ENST00000625967 102 ntBASIC3.93□□□□□ -1.78
VRK3Q8IV63 MAPK10-253ENST00000641010 4072 ntBASIC3.93□□□□□ -1.78
VRK3Q8IV63 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
VRK3Q8IV63 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.93□□□□□ -1.78
VRK3Q8IV63 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
VRK3Q8IV63 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
VRK3Q8IV63 CARF-208ENST00000428585 2513 ntTSL 2 BASIC3.93□□□□□ -1.78
VRK3Q8IV63 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
VRK3Q8IV63 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC3.93□□□□□ -1.78
VRK3Q8IV63 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
VRK3Q8IV63 AL122126.1-201ENST00000546905 1318 ntBASIC3.93□□□□□ -1.78
VRK3Q8IV63 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
VRK3Q8IV63 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.92□□□□□ -1.78
VRK3Q8IV63 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
VRK3Q8IV63 AC074029.4-201ENST00000624796 1859 ntBASIC3.92□□□□□ -1.78
VRK3Q8IV63 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
VRK3Q8IV63 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
VRK3Q8IV63 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
VRK3Q8IV63 AC103710.2-202ENST00000641454 2853 ntBASIC3.92□□□□□ -1.78
VRK3Q8IV63 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
VRK3Q8IV63 SPRR2C-201ENST00000290702 219 ntBASIC3.92□□□□□ -1.78
VRK3Q8IV63 RNA5SP399-201ENST00000364003 117 ntBASIC3.92□□□□□ -1.78
VRK3Q8IV63 RNU6-960P-201ENST00000364056 120 ntBASIC3.92□□□□□ -1.78
VRK3Q8IV63 RHOT1P2-201ENST00000366423 333 ntBASIC3.92□□□□□ -1.78
VRK3Q8IV63 SNORD116-11-201ENST00000383882 92 ntBASIC3.92□□□□□ -1.78
VRK3Q8IV63 RNU6-1040P-201ENST00000383974 107 ntBASIC3.92□□□□□ -1.78
VRK3Q8IV63 SNORA24.1-201ENST00000384401 135 ntBASIC3.92□□□□□ -1.78
VRK3Q8IV63 MIR93-201ENST00000385024 80 ntBASIC3.92□□□□□ -1.78
VRK3Q8IV63 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
VRK3Q8IV63 MRPL42P3-201ENST00000401492 326 ntBASIC3.92□□□□□ -1.78
VRK3Q8IV63 AL136372.1-201ENST00000403060 228 ntBASIC3.92□□□□□ -1.78
VRK3Q8IV63 Y_RNA.618-201ENST00000410949 107 ntBASIC3.92□□□□□ -1.78
VRK3Q8IV63 RNA5SP306-201ENST00000411087 107 ntBASIC3.92□□□□□ -1.78
VRK3Q8IV63 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.92□□□□□ -1.78
VRK3Q8IV63 AC114491.1-201ENST00000416095 246 ntBASIC3.92□□□□□ -1.78
VRK3Q8IV63 MCFD2P1-201ENST00000417812 300 ntBASIC3.92□□□□□ -1.78
VRK3Q8IV63 AC004975.1-201ENST00000428733 208 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 165.6 ms