Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 AC034105.3-201ENST00000565294 442 ntBASIC3.71□□□□□ -1.82
RFX6Q8HWS3 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.71□□□□□ -1.82
RFX6Q8HWS3 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
RFX6Q8HWS3 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.71□□□□□ -1.82
RFX6Q8HWS3 VN1R85P-201ENST00000601587 426 ntBASIC3.71□□□□□ -1.82
RFX6Q8HWS3 BNIP3P9-201ENST00000603714 553 ntBASIC3.71□□□□□ -1.82
RFX6Q8HWS3 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.82
RFX6Q8HWS3 DDX10P1-201ENST00000448545 1933 ntBASIC3.71□□□□□ -1.82
RFX6Q8HWS3 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.71□□□□□ -1.82
RFX6Q8HWS3 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
RFX6Q8HWS3 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.71□□□□□ -1.82
RFX6Q8HWS3 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.71□□□□□ -1.82
RFX6Q8HWS3 PWAR6-201ENST00000552334 4618 ntBASIC3.71□□□□□ -1.82
RFX6Q8HWS3 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RFX6Q8HWS3 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RFX6Q8HWS3 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RFX6Q8HWS3 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RFX6Q8HWS3 Y_RNA.38-201ENST00000362617 102 ntBASIC3.7□□□□□ -1.82
RFX6Q8HWS3 Y_RNA.381-201ENST00000365666 102 ntBASIC3.7□□□□□ -1.82
RFX6Q8HWS3 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.7□□□□□ -1.82
RFX6Q8HWS3 U8.11-201ENST00000384699 133 ntBASIC3.7□□□□□ -1.82
RFX6Q8HWS3 U8.12-201ENST00000384701 133 ntBASIC3.7□□□□□ -1.82
RFX6Q8HWS3 MT-TL1-201ENST00000386347 75 ntBASIC3.7□□□□□ -1.82
RFX6Q8HWS3 RNU6-876P-201ENST00000391295 104 ntBASIC3.7□□□□□ -1.82
RFX6Q8HWS3 U3.39-201ENST00000408569 239 ntBASIC3.7□□□□□ -1.82
RFX6Q8HWS3 RNU6-908P-201ENST00000410160 94 ntBASIC3.7□□□□□ -1.82
RFX6Q8HWS3 UBE2FP1-201ENST00000416536 447 ntBASIC3.7□□□□□ -1.82
RFX6Q8HWS3 TOMM22P1-201ENST00000418578 312 ntBASIC3.7□□□□□ -1.82
RFX6Q8HWS3 SNRPEP10-201ENST00000420249 274 ntBASIC3.7□□□□□ -1.82
RFX6Q8HWS3 AC099677.1-201ENST00000420575 175 ntBASIC3.7□□□□□ -1.82
RFX6Q8HWS3 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC3.7□□□□□ -1.82
RFX6Q8HWS3 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.7□□□□□ -1.82
RFX6Q8HWS3 RPL21P66-201ENST00000426566 466 ntBASIC3.7□□□□□ -1.82
RFX6Q8HWS3 OR2AS1P-201ENST00000427827 319 ntBASIC3.7□□□□□ -1.82
RFX6Q8HWS3 MED13P1-201ENST00000428342 171 ntBASIC3.7□□□□□ -1.82
RFX6Q8HWS3 AL158071.1-201ENST00000430315 461 ntBASIC3.7□□□□□ -1.82
RFX6Q8HWS3 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.7□□□□□ -1.82
RFX6Q8HWS3 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.7□□□□□ -1.82
RFX6Q8HWS3 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.7□□□□□ -1.82
RFX6Q8HWS3 DDX3P2-201ENST00000446138 111 ntBASIC3.7□□□□□ -1.82
RFX6Q8HWS3 U3.44-201ENST00000458938 192 ntBASIC3.7□□□□□ -1.82
RFX6Q8HWS3 RNU7-63P-201ENST00000459054 62 ntBASIC3.7□□□□□ -1.82
RFX6Q8HWS3 U8.18-201ENST00000459285 133 ntBASIC3.7□□□□□ -1.82
RFX6Q8HWS3 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.7□□□□□ -1.82
RFX6Q8HWS3 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.7□□□□□ -1.82
RFX6Q8HWS3 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.7□□□□□ -1.82
RFX6Q8HWS3 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.7□□□□□ -1.82
RFX6Q8HWS3 HMGN1P11-201ENST00000508668 303 ntBASIC3.7□□□□□ -1.82
RFX6Q8HWS3 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.7□□□□□ -1.82
RFX6Q8HWS3 SNORA40.12-201ENST00000516329 111 ntBASIC3.7□□□□□ -1.82
RFX6Q8HWS3 RNU6-579P-201ENST00000516879 102 ntBASIC3.7□□□□□ -1.82
RFX6Q8HWS3 RNU6-1073P-201ENST00000517182 106 ntBASIC3.7□□□□□ -1.82
RFX6Q8HWS3 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.7□□□□□ -1.82
RFX6Q8HWS3 FAM60DP-201ENST00000524174 632 ntBASIC3.7□□□□□ -1.82
RFX6Q8HWS3 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.7□□□□□ -1.82
RFX6Q8HWS3 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.7□□□□□ -1.82
RFX6Q8HWS3 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.7□□□□□ -1.82
RFX6Q8HWS3 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.7□□□□□ -1.82
RFX6Q8HWS3 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.7□□□□□ -1.82
RFX6Q8HWS3 AL121603.1-201ENST00000553815 142 ntBASIC3.7□□□□□ -1.82
RFX6Q8HWS3 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.7□□□□□ -1.82
RFX6Q8HWS3 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.7□□□□□ -1.82
RFX6Q8HWS3 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
RFX6Q8HWS3 MIR4697-201ENST00000582977 78 ntBASIC3.7□□□□□ -1.82
RFX6Q8HWS3 AC060780.3-201ENST00000589464 80 ntBASIC3.7□□□□□ -1.82
RFX6Q8HWS3 AC006023.2-201ENST00000609916 167 ntBASIC3.7□□□□□ -1.82
RFX6Q8HWS3 YWHAEP7-203ENST00000622054 312 ntBASIC3.7□□□□□ -1.82
RFX6Q8HWS3 FRG1KP-201ENST00000623592 341 ntBASIC3.7□□□□□ -1.82
RFX6Q8HWS3 MIR3662-201ENST00000637030 95 ntBASIC3.7□□□□□ -1.82
RFX6Q8HWS3 CASC19-280ENST00000642102 1351 ntBASIC3.7□□□□□ -1.82
RFX6Q8HWS3 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.7□□□□□ -1.82
RFX6Q8HWS3 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
RFX6Q8HWS3 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
RFX6Q8HWS3 CKAP2P1-201ENST00000555477 2049 ntBASIC3.7□□□□□ -1.82
RFX6Q8HWS3 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.69□□□□□ -1.82
RFX6Q8HWS3 AC068647.1-201ENST00000489539 2265 ntBASIC3.69□□□□□ -1.82
RFX6Q8HWS3 AC007823.1-201ENST00000569932 1566 ntBASIC3.69□□□□□ -1.82
RFX6Q8HWS3 MTND4P12-201ENST00000498999 1377 ntBASIC3.69□□□□□ -1.82
RFX6Q8HWS3 CBX3P1-201ENST00000325243 554 ntBASIC3.69□□□□□ -1.82
RFX6Q8HWS3 RNA5SP515-201ENST00000364570 118 ntBASIC3.69□□□□□ -1.82
RFX6Q8HWS3 Y_RNA.367-201ENST00000365544 101 ntBASIC3.69□□□□□ -1.82
RFX6Q8HWS3 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
RFX6Q8HWS3 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
RFX6Q8HWS3 RNU6-606P-201ENST00000384721 111 ntBASIC3.69□□□□□ -1.82
RFX6Q8HWS3 RNU6-1158P-201ENST00000391167 107 ntBASIC3.69□□□□□ -1.82
RFX6Q8HWS3 AL590704.1-201ENST00000402856 794 ntBASIC3.69□□□□□ -1.82
RFX6Q8HWS3 AL136372.1-201ENST00000403060 228 ntBASIC3.69□□□□□ -1.82
RFX6Q8HWS3 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.69□□□□□ -1.82
RFX6Q8HWS3 RPL30P2-201ENST00000414021 291 ntBASIC3.69□□□□□ -1.82
RFX6Q8HWS3 GTF2IP20-201ENST00000431663 360 ntBASIC3.69□□□□□ -1.82
RFX6Q8HWS3 AC016691.1-201ENST00000441321 413 ntBASIC3.69□□□□□ -1.82
RFX6Q8HWS3 AL118496.2-201ENST00000448300 230 ntBASIC3.69□□□□□ -1.82
RFX6Q8HWS3 SNRPGP6-201ENST00000451124 220 ntBASIC3.69□□□□□ -1.82
RFX6Q8HWS3 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC3.69□□□□□ -1.82
RFX6Q8HWS3 HMGN2P16-201ENST00000456802 261 ntBASIC3.69□□□□□ -1.82
RFX6Q8HWS3 RPS29P25-201ENST00000481709 171 ntBASIC3.69□□□□□ -1.82
RFX6Q8HWS3 HSPD1P15-201ENST00000505573 1122 ntBASIC3.69□□□□□ -1.82
RFX6Q8HWS3 HMGB1P41-201ENST00000520234 440 ntBASIC3.69□□□□□ -1.82
RFX6Q8HWS3 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.69□□□□□ -1.82
RFX6Q8HWS3 AC018630.1-201ENST00000541376 925 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms