Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 AL137003.2-201ENST00000606924 2538 ntBASIC4.42□□□□□ -1.7
ATG4DQ86TL0 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
ATG4DQ86TL0 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.42□□□□□ -1.7
ATG4DQ86TL0 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
ATG4DQ86TL0 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
ATG4DQ86TL0 SMG1P6-201ENST00000532337 2930 ntBASIC4.42□□□□□ -1.7
ATG4DQ86TL0 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
ATG4DQ86TL0 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC4.41□□□□□ -1.7
ATG4DQ86TL0 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
ATG4DQ86TL0 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
ATG4DQ86TL0 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
ATG4DQ86TL0 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
ATG4DQ86TL0 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.41□□□□□ -1.7
ATG4DQ86TL0 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
ATG4DQ86TL0 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
ATG4DQ86TL0 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
ATG4DQ86TL0 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
ATG4DQ86TL0 Y_RNA.143-201ENST00000363520 106 ntBASIC4.41□□□□□ -1.7
ATG4DQ86TL0 RNU6-1317P-201ENST00000364582 104 ntBASIC4.41□□□□□ -1.7
ATG4DQ86TL0 Y_RNA.480-201ENST00000384364 102 ntBASIC4.41□□□□□ -1.7
ATG4DQ86TL0 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.41□□□□□ -1.7
ATG4DQ86TL0 RN7SKP216-201ENST00000411050 312 ntBASIC4.41□□□□□ -1.7
ATG4DQ86TL0 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC4.41□□□□□ -1.7
ATG4DQ86TL0 AC073063.1-201ENST00000434352 607 ntBASIC4.41□□□□□ -1.7
ATG4DQ86TL0 AC004866.2-201ENST00000438285 481 ntBASIC4.41□□□□□ -1.7
ATG4DQ86TL0 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.41□□□□□ -1.7
ATG4DQ86TL0 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC4.41□□□□□ -1.7
ATG4DQ86TL0 AC010655.1-201ENST00000449336 292 ntBASIC4.41□□□□□ -1.7
ATG4DQ86TL0 RPL23AP56-201ENST00000460778 453 ntBASIC4.41□□□□□ -1.7
ATG4DQ86TL0 RPL21P104-201ENST00000464143 478 ntBASIC4.41□□□□□ -1.7
ATG4DQ86TL0 RPL21P6-201ENST00000479171 504 ntBASIC4.41□□□□□ -1.7
ATG4DQ86TL0 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.41□□□□□ -1.7
ATG4DQ86TL0 AC074250.1-201ENST00000511117 192 ntBASIC4.41□□□□□ -1.7
ATG4DQ86TL0 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.41□□□□□ -1.7
ATG4DQ86TL0 OR7H2P-201ENST00000513483 306 ntBASIC4.41□□□□□ -1.7
ATG4DQ86TL0 RNU6-709P-201ENST00000517257 104 ntBASIC4.41□□□□□ -1.7
ATG4DQ86TL0 AC069113.1-201ENST00000517763 267 ntBASIC4.41□□□□□ -1.7
ATG4DQ86TL0 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.41□□□□□ -1.7
ATG4DQ86TL0 AC021006.3-201ENST00000530771 192 ntBASIC4.41□□□□□ -1.7
ATG4DQ86TL0 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.41□□□□□ -1.7
ATG4DQ86TL0 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.41□□□□□ -1.7
ATG4DQ86TL0 AC008033.2-201ENST00000542626 177 ntBASIC4.41□□□□□ -1.7
ATG4DQ86TL0 AC093023.1-201ENST00000547375 507 ntBASIC4.41□□□□□ -1.7
ATG4DQ86TL0 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.41□□□□□ -1.7
ATG4DQ86TL0 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.41□□□□□ -1.7
ATG4DQ86TL0 AC005951.2-201ENST00000576282 495 ntBASIC4.41□□□□□ -1.7
ATG4DQ86TL0 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.41□□□□□ -1.7
ATG4DQ86TL0 MIR4472-2-201ENST00000582069 67 ntBASIC4.41□□□□□ -1.7
ATG4DQ86TL0 AC005191.1-201ENST00000603950 358 ntBASIC4.41□□□□□ -1.7
ATG4DQ86TL0 AL121917.1-203ENST00000605534 577 ntBASIC4.41□□□□□ -1.7
ATG4DQ86TL0 AC005344.1-201ENST00000613391 459 ntBASIC4.41□□□□□ -1.7
ATG4DQ86TL0 U2.14-201ENST00000615943 113 ntBASIC4.41□□□□□ -1.7
ATG4DQ86TL0 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC4.41□□□□□ -1.7
ATG4DQ86TL0 AP001005.3-201ENST00000622049 129 ntBASIC4.41□□□□□ -1.7
ATG4DQ86TL0 AL161637.1-201ENST00000622380 412 ntBASIC4.41□□□□□ -1.7
ATG4DQ86TL0 FP236240.3-201ENST00000623061 327 ntBASIC4.41□□□□□ -1.7
ATG4DQ86TL0 AC099654.2-201ENST00000433031 1980 ntBASIC4.41□□□□□ -1.7
ATG4DQ86TL0 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
ATG4DQ86TL0 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
ATG4DQ86TL0 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
ATG4DQ86TL0 AL031119.1-201ENST00000404707 1879 ntBASIC4.41□□□□□ -1.7
ATG4DQ86TL0 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
ATG4DQ86TL0 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
ATG4DQ86TL0 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.41□□□□□ -1.7
ATG4DQ86TL0 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
ATG4DQ86TL0 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
ATG4DQ86TL0 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC4.4□□□□□ -1.7
ATG4DQ86TL0 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.4□□□□□ -1.7
ATG4DQ86TL0 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.4□□□□□ -1.7
ATG4DQ86TL0 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
ATG4DQ86TL0 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
ATG4DQ86TL0 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.4□□□□□ -1.71
ATG4DQ86TL0 RNU6-371P-201ENST00000364283 108 ntBASIC4.4□□□□□ -1.71
ATG4DQ86TL0 Y_RNA.304-201ENST00000365011 112 ntBASIC4.4□□□□□ -1.71
ATG4DQ86TL0 RPS29P13-201ENST00000402041 169 ntBASIC4.4□□□□□ -1.71
ATG4DQ86TL0 AL080315.1-201ENST00000406055 466 ntBASIC4.4□□□□□ -1.71
ATG4DQ86TL0 Y_RNA.602-201ENST00000410535 92 ntBASIC4.4□□□□□ -1.71
ATG4DQ86TL0 Y_RNA.625-201ENST00000411256 107 ntBASIC4.4□□□□□ -1.71
ATG4DQ86TL0 Y_RNA.626-201ENST00000411288 95 ntBASIC4.4□□□□□ -1.71
ATG4DQ86TL0 RPL21P90-201ENST00000415692 466 ntBASIC4.4□□□□□ -1.71
ATG4DQ86TL0 COX6B1P1-201ENST00000415962 213 ntBASIC4.4□□□□□ -1.71
ATG4DQ86TL0 RPL36AP10-201ENST00000421785 322 ntBASIC4.4□□□□□ -1.71
ATG4DQ86TL0 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.4□□□□□ -1.71
ATG4DQ86TL0 AC091286.1-201ENST00000431233 461 ntBASIC4.4□□□□□ -1.71
ATG4DQ86TL0 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.4□□□□□ -1.71
ATG4DQ86TL0 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.4□□□□□ -1.71
ATG4DQ86TL0 MRPL48P1-201ENST00000445390 636 ntBASIC4.4□□□□□ -1.71
ATG4DQ86TL0 RPL7L1P1-201ENST00000448259 785 ntBASIC4.4□□□□□ -1.71
ATG4DQ86TL0 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.4□□□□□ -1.71
ATG4DQ86TL0 RPS23P1-201ENST00000491662 432 ntBASIC4.4□□□□□ -1.71
ATG4DQ86TL0 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.4□□□□□ -1.71
ATG4DQ86TL0 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC4.4□□□□□ -1.71
ATG4DQ86TL0 AC018442.3-201ENST00000523025 183 ntBASIC4.4□□□□□ -1.71
ATG4DQ86TL0 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.4□□□□□ -1.71
ATG4DQ86TL0 AC007458.1-201ENST00000542812 373 ntBASIC4.4□□□□□ -1.71
ATG4DQ86TL0 MIR5701-3-201ENST00000578890 82 ntBASIC4.4□□□□□ -1.71
ATG4DQ86TL0 CPDP1-201ENST00000579660 283 ntBASIC4.4□□□□□ -1.71
ATG4DQ86TL0 MIR5701-1-201ENST00000585138 82 ntBASIC4.4□□□□□ -1.71
ATG4DQ86TL0 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.4□□□□□ -1.71
ATG4DQ86TL0 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms