Protein–RNA interactions for Protein: Q70EL4

USP43, Ubiquitin carboxyl-terminal hydrolase 43, humanhuman

Predictions only

Length 1,123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP43Q70EL4 RPL23AP16-201ENST00000441715 421 ntBASIC3.37□□□□□ -1.87
USP43Q70EL4 RPL17P49-201ENST00000443728 411 ntBASIC3.37□□□□□ -1.87
USP43Q70EL4 RPL23AP20-201ENST00000447965 421 ntBASIC3.37□□□□□ -1.87
USP43Q70EL4 RPL23AP15-201ENST00000450202 459 ntBASIC3.37□□□□□ -1.87
USP43Q70EL4 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.37□□□□□ -1.87
USP43Q70EL4 AL583843.1-201ENST00000456070 346 ntBASIC3.37□□□□□ -1.87
USP43Q70EL4 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.37□□□□□ -1.87
USP43Q70EL4 RNU6-1208P-201ENST00000459588 107 ntBASIC3.37□□□□□ -1.87
USP43Q70EL4 RPL31P50-201ENST00000471002 296 ntBASIC3.37□□□□□ -1.87
USP43Q70EL4 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.37□□□□□ -1.87
USP43Q70EL4 AC007182.2-201ENST00000489251 402 ntBASIC3.37□□□□□ -1.87
USP43Q70EL4 AC078817.1-201ENST00000492623 435 ntBASIC3.37□□□□□ -1.87
USP43Q70EL4 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.37□□□□□ -1.87
USP43Q70EL4 TMEM251P1-201ENST00000503717 318 ntBASIC3.37□□□□□ -1.87
USP43Q70EL4 AC103851.1-201ENST00000506833 274 ntBASIC3.37□□□□□ -1.87
USP43Q70EL4 AC006390.1-201ENST00000508068 283 ntBASIC3.37□□□□□ -1.87
USP43Q70EL4 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC3.37□□□□□ -1.87
USP43Q70EL4 AC026782.1-201ENST00000512952 449 ntBASIC3.37□□□□□ -1.87
USP43Q70EL4 AC093677.1-201ENST00000514414 678 ntBASIC3.37□□□□□ -1.87
USP43Q70EL4 RNU6-835P-201ENST00000516974 104 ntBASIC3.37□□□□□ -1.87
USP43Q70EL4 RNA5SP380-201ENST00000517190 98 ntBASIC3.37□□□□□ -1.87
USP43Q70EL4 AC104986.1-201ENST00000517978 436 ntBASIC3.37□□□□□ -1.87
USP43Q70EL4 AC087369.1-201ENST00000520775 996 ntBASIC3.37□□□□□ -1.87
USP43Q70EL4 ZNF705CP-201ENST00000530515 889 ntBASIC3.37□□□□□ -1.87
USP43Q70EL4 AC091516.1-201ENST00000549191 703 ntBASIC3.37□□□□□ -1.87
USP43Q70EL4 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.37□□□□□ -1.87
USP43Q70EL4 TRAV37-201ENST00000553906 342 ntBASIC3.37□□□□□ -1.87
USP43Q70EL4 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3.37□□□□□ -1.87
USP43Q70EL4 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.37□□□□□ -1.87
USP43Q70EL4 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.37□□□□□ -1.87
USP43Q70EL4 AL162413.1-201ENST00000603198 110 ntBASIC3.37□□□□□ -1.87
USP43Q70EL4 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.37□□□□□ -1.87
USP43Q70EL4 AL355598.1-201ENST00000604169 202 ntBASIC3.37□□□□□ -1.87
USP43Q70EL4 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.37□□□□□ -1.87
USP43Q70EL4 AC009268.2-201ENST00000621925 457 ntBASIC3.37□□□□□ -1.87
USP43Q70EL4 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.37□□□□□ -1.87
USP43Q70EL4 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
USP43Q70EL4 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.37□□□□□ -1.87
USP43Q70EL4 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
USP43Q70EL4 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
USP43Q70EL4 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.37□□□□□ -1.87
USP43Q70EL4 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
USP43Q70EL4 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.36□□□□□ -1.87
USP43Q70EL4 RNA5SP391-201ENST00000363456 119 ntBASIC3.36□□□□□ -1.87
USP43Q70EL4 SNORD46.1-201ENST00000364139 104 ntBASIC3.36□□□□□ -1.87
USP43Q70EL4 RNA5SP235-201ENST00000365411 114 ntBASIC3.36□□□□□ -1.87
USP43Q70EL4 SNORA4.3-201ENST00000365564 137 ntBASIC3.36□□□□□ -1.87
USP43Q70EL4 RNU6-805P-201ENST00000365643 106 ntBASIC3.36□□□□□ -1.87
USP43Q70EL4 RNU6-444P-201ENST00000383988 108 ntBASIC3.36□□□□□ -1.87
USP43Q70EL4 RNU6-356P-201ENST00000384140 107 ntBASIC3.36□□□□□ -1.87
USP43Q70EL4 Y_RNA.459-201ENST00000384251 102 ntBASIC3.36□□□□□ -1.87
USP43Q70EL4 RNU6-43P-201ENST00000384302 107 ntBASIC3.36□□□□□ -1.87
USP43Q70EL4 MIR153-1-201ENST00000384914 90 ntBASIC3.36□□□□□ -1.87
USP43Q70EL4 MIR199A2-201ENST00000385289 110 ntBASIC3.36□□□□□ -1.87
USP43Q70EL4 RNU11-4P-201ENST00000391149 133 ntBASIC3.36□□□□□ -1.87
USP43Q70EL4 RPL7P25-201ENST00000404151 721 ntBASIC3.36□□□□□ -1.87
USP43Q70EL4 HSPE1P12-201ENST00000412576 301 ntBASIC3.36□□□□□ -1.87
USP43Q70EL4 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.36□□□□□ -1.87
USP43Q70EL4 CRYBB2P1-203ENST00000415709 538 ntBASIC3.36□□□□□ -1.87
USP43Q70EL4 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.36□□□□□ -1.87
USP43Q70EL4 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
USP43Q70EL4 Z82205.1-201ENST00000428456 297 ntBASIC3.36□□□□□ -1.87
USP43Q70EL4 AC133104.1-201ENST00000429100 218 ntBASIC3.36□□□□□ -1.87
USP43Q70EL4 USP9YP16-201ENST00000430287 407 ntBASIC3.36□□□□□ -1.87
USP43Q70EL4 RPL31P35-201ENST00000431058 377 ntBASIC3.36□□□□□ -1.87
USP43Q70EL4 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.36□□□□□ -1.87
USP43Q70EL4 FCF1P1-201ENST00000432690 571 ntBASIC3.36□□□□□ -1.87
USP43Q70EL4 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.36□□□□□ -1.87
USP43Q70EL4 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.36□□□□□ -1.87
USP43Q70EL4 HMGN3P1-201ENST00000453847 193 ntBASIC3.36□□□□□ -1.87
USP43Q70EL4 USP9YP23-201ENST00000455085 407 ntBASIC3.36□□□□□ -1.87
USP43Q70EL4 AC099563.1-201ENST00000456086 418 ntBASIC3.36□□□□□ -1.87
USP43Q70EL4 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.36□□□□□ -1.87
USP43Q70EL4 AC130509.1-201ENST00000464158 433 ntBASIC3.36□□□□□ -1.87
USP43Q70EL4 RPL36AP51-201ENST00000487216 318 ntBASIC3.36□□□□□ -1.87
USP43Q70EL4 AC110792.1-201ENST00000491826 472 ntBASIC3.36□□□□□ -1.87
USP43Q70EL4 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.36□□□□□ -1.87
USP43Q70EL4 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.36□□□□□ -1.87
USP43Q70EL4 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.36□□□□□ -1.87
USP43Q70EL4 PTP4A1P4-201ENST00000512479 322 ntBASIC3.36□□□□□ -1.87
USP43Q70EL4 AC034159.1-201ENST00000513885 583 ntBASIC3.36□□□□□ -1.87
USP43Q70EL4 Y_RNA.672-201ENST00000516289 104 ntBASIC3.36□□□□□ -1.87
USP43Q70EL4 RNU7-30P-201ENST00000516835 62 ntBASIC3.36□□□□□ -1.87
USP43Q70EL4 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.36□□□□□ -1.87
USP43Q70EL4 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.36□□□□□ -1.87
USP43Q70EL4 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.36□□□□□ -1.87
USP43Q70EL4 COX6CP8-201ENST00000522620 226 ntBASIC3.36□□□□□ -1.87
USP43Q70EL4 AP003181.2-201ENST00000528941 181 ntBASIC3.36□□□□□ -1.87
USP43Q70EL4 OR5D17P-201ENST00000531492 978 ntBASIC3.36□□□□□ -1.87
USP43Q70EL4 AC243972.3-201ENST00000539655 198 ntBASIC3.36□□□□□ -1.87
USP43Q70EL4 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.36□□□□□ -1.87
USP43Q70EL4 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.36□□□□□ -1.87
USP43Q70EL4 AL512605.2-201ENST00000592972 256 ntBASIC3.36□□□□□ -1.87
USP43Q70EL4 AC021646.1-201ENST00000605469 484 ntBASIC3.36□□□□□ -1.87
USP43Q70EL4 SNORA51-201ENST00000606420 132 ntBASIC3.36□□□□□ -1.87
USP43Q70EL4 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.36□□□□□ -1.87
USP43Q70EL4 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.36□□□□□ -1.87
USP43Q70EL4 AC039056.2-201ENST00000622261 511 ntBASIC3.36□□□□□ -1.87
USP43Q70EL4 CR392039.5-201ENST00000623201 510 ntBASIC3.36□□□□□ -1.87
USP43Q70EL4 AL732618.1-201ENST00000623251 301 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms