Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
C9orf139Q6ZV77 HMGN1P11-201ENST00000508668 303 ntBASIC3.11□□□□□ -1.91
C9orf139Q6ZV77 AC004062.1-201ENST00000509926 645 ntBASIC3.11□□□□□ -1.91
C9orf139Q6ZV77 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.11□□□□□ -1.91
C9orf139Q6ZV77 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.11□□□□□ -1.91
C9orf139Q6ZV77 AP004371.1-201ENST00000525240 214 ntBASIC3.11□□□□□ -1.91
C9orf139Q6ZV77 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.11□□□□□ -1.91
C9orf139Q6ZV77 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.11□□□□□ -1.91
C9orf139Q6ZV77 AC126177.3-201ENST00000551839 688 ntBASIC3.11□□□□□ -1.91
C9orf139Q6ZV77 GNRHR2P1-201ENST00000555315 631 ntBASIC3.11□□□□□ -1.91
C9orf139Q6ZV77 ZNF192P1-203ENST00000565888 810 ntBASIC3.11□□□□□ -1.91
C9orf139Q6ZV77 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.11□□□□□ -1.91
C9orf139Q6ZV77 HMGN2P28-201ENST00000606102 262 ntBASIC3.11□□□□□ -1.91
C9orf139Q6ZV77 TUG1_2.1-201ENST00000614234 87 ntBASIC3.11□□□□□ -1.91
C9orf139Q6ZV77 AC004696.1-201ENST00000614345 607 ntBASIC3.11□□□□□ -1.91
C9orf139Q6ZV77 AL603758.1-201ENST00000618654 241 ntBASIC3.11□□□□□ -1.91
C9orf139Q6ZV77 AC090617.10-201ENST00000624308 134 ntBASIC3.11□□□□□ -1.91
C9orf139Q6ZV77 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.11□□□□□ -1.91
C9orf139Q6ZV77 AL034408.1-202ENST00000636088 415 ntBASIC3.11□□□□□ -1.91
C9orf139Q6ZV77 AL773545.4-201ENST00000637262 310 ntBASIC3.11□□□□□ -1.91
C9orf139Q6ZV77 AL513478.4-201ENST00000641636 310 ntBASIC3.11□□□□□ -1.91
C9orf139Q6ZV77 AC009093.8-201ENST00000641769 292 ntBASIC3.11□□□□□ -1.91
C9orf139Q6ZV77 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
C9orf139Q6ZV77 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
C9orf139Q6ZV77 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.11□□□□□ -1.91
C9orf139Q6ZV77 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
C9orf139Q6ZV77 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.11□□□□□ -1.91
C9orf139Q6ZV77 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
C9orf139Q6ZV77 AL645937.1-201ENST00000641739 1652 ntBASIC3.11□□□□□ -1.91
C9orf139Q6ZV77 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
C9orf139Q6ZV77 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.1□□□□□ -1.91
C9orf139Q6ZV77 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.1□□□□□ -1.91
C9orf139Q6ZV77 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
C9orf139Q6ZV77 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
C9orf139Q6ZV77 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
C9orf139Q6ZV77 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
C9orf139Q6ZV77 AC004925.1-201ENST00000624256 2706 ntBASIC3.1□□□□□ -1.91
C9orf139Q6ZV77 AP001350.1-201ENST00000601906 1524 ntBASIC3.1□□□□□ -1.91
C9orf139Q6ZV77 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
C9orf139Q6ZV77 SNORA63.1-201ENST00000362493 131 ntBASIC3.1□□□□□ -1.91
C9orf139Q6ZV77 Y_RNA.142-201ENST00000363491 102 ntBASIC3.1□□□□□ -1.91
C9orf139Q6ZV77 SNORD81.2-201ENST00000365153 76 ntBASIC3.1□□□□□ -1.91
C9orf139Q6ZV77 RNU4-20P-201ENST00000365601 151 ntBASIC3.1□□□□□ -1.91
C9orf139Q6ZV77 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
C9orf139Q6ZV77 MT-TD-201ENST00000387419 68 ntBASIC3.1□□□□□ -1.91
C9orf139Q6ZV77 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
C9orf139Q6ZV77 RNU6-903P-201ENST00000391270 109 ntBASIC3.1□□□□□ -1.91
C9orf139Q6ZV77 AL162578.1-201ENST00000406202 378 ntBASIC3.1□□□□□ -1.91
C9orf139Q6ZV77 RNU4-65P-201ENST00000410473 140 ntBASIC3.1□□□□□ -1.91
C9orf139Q6ZV77 RNA5SP39-201ENST00000411245 120 ntBASIC3.1□□□□□ -1.91
C9orf139Q6ZV77 RNU2-71P-201ENST00000411395 189 ntBASIC3.1□□□□□ -1.91
C9orf139Q6ZV77 RPL21P24-201ENST00000413752 448 ntBASIC3.1□□□□□ -1.91
C9orf139Q6ZV77 CRYBB2P1-203ENST00000415709 538 ntBASIC3.1□□□□□ -1.91
C9orf139Q6ZV77 SSXP9-201ENST00000417503 292 ntBASIC3.1□□□□□ -1.91
C9orf139Q6ZV77 SYF2P2-201ENST00000417620 583 ntBASIC3.1□□□□□ -1.91
C9orf139Q6ZV77 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.1□□□□□ -1.91
C9orf139Q6ZV77 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.1□□□□□ -1.91
C9orf139Q6ZV77 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.1□□□□□ -1.91
C9orf139Q6ZV77 AC087650.1-201ENST00000431445 468 ntBASIC3.1□□□□□ -1.91
C9orf139Q6ZV77 CYCSP43-201ENST00000438233 310 ntBASIC3.1□□□□□ -1.91
C9orf139Q6ZV77 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.1□□□□□ -1.91
C9orf139Q6ZV77 AC093019.1-201ENST00000443135 252 ntBASIC3.1□□□□□ -1.91
C9orf139Q6ZV77 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
C9orf139Q6ZV77 GAPDHP27-201ENST00000447427 1020 ntBASIC3.1□□□□□ -1.91
C9orf139Q6ZV77 AL162389.1-201ENST00000449233 177 ntBASIC3.1□□□□□ -1.91
C9orf139Q6ZV77 MTND3P16-201ENST00000452205 344 ntBASIC3.1□□□□□ -1.91
C9orf139Q6ZV77 RNU7-182P-201ENST00000459009 62 ntBASIC3.1□□□□□ -1.91
C9orf139Q6ZV77 AC092451.1-201ENST00000480211 153 ntBASIC3.1□□□□□ -1.91
C9orf139Q6ZV77 RPS26P15-201ENST00000488067 348 ntBASIC3.1□□□□□ -1.91
C9orf139Q6ZV77 AC093278.1-201ENST00000494700 600 ntBASIC3.1□□□□□ -1.91
C9orf139Q6ZV77 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.1□□□□□ -1.91
C9orf139Q6ZV77 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.1□□□□□ -1.91
C9orf139Q6ZV77 AC103783.1-201ENST00000520506 373 ntBASIC3.1□□□□□ -1.91
C9orf139Q6ZV77 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC3.1□□□□□ -1.91
C9orf139Q6ZV77 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
C9orf139Q6ZV77 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.1□□□□□ -1.91
C9orf139Q6ZV77 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
C9orf139Q6ZV77 OR5AL2P-201ENST00000532185 920 ntBASIC3.1□□□□□ -1.91
C9orf139Q6ZV77 OR5B10P-201ENST00000532869 642 ntBASIC3.1□□□□□ -1.91
C9orf139Q6ZV77 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.1□□□□□ -1.91
C9orf139Q6ZV77 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.1□□□□□ -1.91
C9orf139Q6ZV77 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.1□□□□□ -1.91
C9orf139Q6ZV77 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC3.1□□□□□ -1.91
C9orf139Q6ZV77 RPS3AP23-202ENST00000574601 686 ntBASIC3.1□□□□□ -1.91
C9orf139Q6ZV77 AC024619.4-201ENST00000580924 316 ntBASIC3.1□□□□□ -1.91
C9orf139Q6ZV77 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.1□□□□□ -1.91
C9orf139Q6ZV77 AC012531.5-201ENST00000611375 151 ntBASIC3.1□□□□□ -1.91
C9orf139Q6ZV77 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.1□□□□□ -1.91
C9orf139Q6ZV77 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.1□□□□□ -1.91
C9orf139Q6ZV77 AL136221.1-201ENST00000621449 509 ntBASIC3.1□□□□□ -1.91
C9orf139Q6ZV77 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.1□□□□□ -1.91
C9orf139Q6ZV77 AC005858.4-201ENST00000623191 700 ntBASIC3.1□□□□□ -1.91
C9orf139Q6ZV77 AC243312.2-201ENST00000623340 601 ntBASIC3.1□□□□□ -1.91
C9orf139Q6ZV77 MTND5P17-201ENST00000418405 1603 ntBASIC3.1□□□□□ -1.91
C9orf139Q6ZV77 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
C9orf139Q6ZV77 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
C9orf139Q6ZV77 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.1□□□□□ -1.91
C9orf139Q6ZV77 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
C9orf139Q6ZV77 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.1□□□□□ -1.91
C9orf139Q6ZV77 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms