Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 CR392039.5-201ENST00000623201 510 ntBASIC5.32□□□□□ -1.56
PRPF40BQ6NWY9 AC007546.2-201ENST00000623996 360 ntBASIC5.32□□□□□ -1.56
PRPF40BQ6NWY9 AC012442.3-202ENST00000636742 206 ntBASIC5.32□□□□□ -1.56
PRPF40BQ6NWY9 ZNF519P1-201ENST00000449011 1626 ntBASIC5.32□□□□□ -1.56
PRPF40BQ6NWY9 MAPK10-286ENST00000641208 8747 ntBASIC5.32□□□□□ -1.56
PRPF40BQ6NWY9 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PRPF40BQ6NWY9 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC5.32□□□□□ -1.56
PRPF40BQ6NWY9 NEAT1-202ENST00000501122 22743 ntBASIC5.32□□□□□ -1.56
PRPF40BQ6NWY9 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC5.32□□□□□ -1.56
PRPF40BQ6NWY9 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PRPF40BQ6NWY9 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
PRPF40BQ6NWY9 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PRPF40BQ6NWY9 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
PRPF40BQ6NWY9 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PRPF40BQ6NWY9 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
PRPF40BQ6NWY9 RNU6-562P-201ENST00000362731 107 ntBASIC5.31□□□□□ -1.56
PRPF40BQ6NWY9 RNA5SP175-201ENST00000364275 119 ntBASIC5.31□□□□□ -1.56
PRPF40BQ6NWY9 SMIM11P1-201ENST00000369586 178 ntBASIC5.31□□□□□ -1.56
PRPF40BQ6NWY9 AC019155.1-201ENST00000382242 574 ntBASIC5.31□□□□□ -1.56
PRPF40BQ6NWY9 RNU6-1040P-201ENST00000383974 107 ntBASIC5.31□□□□□ -1.56
PRPF40BQ6NWY9 RNU6-701P-201ENST00000384059 107 ntBASIC5.31□□□□□ -1.56
PRPF40BQ6NWY9 PVALB-202ENST00000404171 422 ntTSL 2 BASIC5.31□□□□□ -1.56
PRPF40BQ6NWY9 AC092447.6-201ENST00000414578 210 ntBASIC5.31□□□□□ -1.56
PRPF40BQ6NWY9 CRYBB2P1-203ENST00000415709 538 ntBASIC5.31□□□□□ -1.56
PRPF40BQ6NWY9 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC5.31□□□□□ -1.56
PRPF40BQ6NWY9 AL137014.1-201ENST00000420490 1226 ntBASIC5.31□□□□□ -1.56
PRPF40BQ6NWY9 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC5.31□□□□□ -1.56
PRPF40BQ6NWY9 AL035666.1-201ENST00000446195 348 ntBASIC5.31□□□□□ -1.56
PRPF40BQ6NWY9 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC5.31□□□□□ -1.56
PRPF40BQ6NWY9 RPL37P6-202ENST00000464216 403 ntBASIC5.31□□□□□ -1.56
PRPF40BQ6NWY9 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC5.31□□□□□ -1.56
PRPF40BQ6NWY9 AL135752.1-201ENST00000479477 471 ntBASIC5.31□□□□□ -1.56
PRPF40BQ6NWY9 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC5.31□□□□□ -1.56
PRPF40BQ6NWY9 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.31□□□□□ -1.56
PRPF40BQ6NWY9 RNU6-1016P-201ENST00000516689 94 ntBASIC5.31□□□□□ -1.56
PRPF40BQ6NWY9 RN7SKP234-201ENST00000517173 224 ntBASIC5.31□□□□□ -1.56
PRPF40BQ6NWY9 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC5.31□□□□□ -1.56
PRPF40BQ6NWY9 STX3-204ENST00000530221 534 ntTSL 5 BASIC5.31□□□□□ -1.56
PRPF40BQ6NWY9 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.31□□□□□ -1.56
PRPF40BQ6NWY9 RPL23AP84-201ENST00000571193 464 ntBASIC5.31□□□□□ -1.56
PRPF40BQ6NWY9 AC067852.4-201ENST00000590314 478 ntBASIC5.31□□□□□ -1.56
PRPF40BQ6NWY9 AC124312.5-201ENST00000604451 268 ntBASIC5.31□□□□□ -1.56
PRPF40BQ6NWY9 AC009570.1-201ENST00000609599 745 ntBASIC5.31□□□□□ -1.56
PRPF40BQ6NWY9 AL122125.1-201ENST00000616999 600 ntBASIC5.31□□□□□ -1.56
PRPF40BQ6NWY9 TTK-211ENST00000627129 240 ntTSL 5 BASIC5.31□□□□□ -1.56
PRPF40BQ6NWY9 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
PRPF40BQ6NWY9 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
PRPF40BQ6NWY9 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC5.31□□□□□ -1.56
PRPF40BQ6NWY9 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
PRPF40BQ6NWY9 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PRPF40BQ6NWY9 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC5.31□□□□□ -1.56
PRPF40BQ6NWY9 KPNA2P1-201ENST00000458289 1591 ntBASIC5.3□□□□□ -1.56
PRPF40BQ6NWY9 MTCO1P24-201ENST00000515438 1558 ntBASIC5.3□□□□□ -1.56
PRPF40BQ6NWY9 FAM91A3P-201ENST00000456826 2544 ntBASIC5.3□□□□□ -1.56
PRPF40BQ6NWY9 MIR200C-201ENST00000384980 68 ntBASIC5.3□□□□□ -1.56
PRPF40BQ6NWY9 SNORD70.1-201ENST00000391007 85 ntBASIC5.3□□□□□ -1.56
PRPF40BQ6NWY9 RPS12P24-201ENST00000412619 387 ntBASIC5.3□□□□□ -1.56
PRPF40BQ6NWY9 ELOCP18-201ENST00000434209 337 ntBASIC5.3□□□□□ -1.56
PRPF40BQ6NWY9 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC5.3□□□□□ -1.56
PRPF40BQ6NWY9 AC104058.1-201ENST00000448028 297 ntBASIC5.3□□□□□ -1.56
PRPF40BQ6NWY9 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PRPF40BQ6NWY9 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC5.3□□□□□ -1.56
PRPF40BQ6NWY9 AP003122.3-201ENST00000526316 255 ntBASIC5.3□□□□□ -1.56
PRPF40BQ6NWY9 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC5.3□□□□□ -1.56
PRPF40BQ6NWY9 AL121576.1-201ENST00000556055 276 ntBASIC5.3□□□□□ -1.56
PRPF40BQ6NWY9 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC5.3□□□□□ -1.56
PRPF40BQ6NWY9 AC005014.2-201ENST00000607795 599 ntBASIC5.3□□□□□ -1.56
PRPF40BQ6NWY9 5S_rRNA.16-201ENST00000612928 119 ntBASIC5.3□□□□□ -1.56
PRPF40BQ6NWY9 AL138726.1-201ENST00000614873 333 ntBASIC5.3□□□□□ -1.56
PRPF40BQ6NWY9 MIR6128-201ENST00000615528 109 ntBASIC5.3□□□□□ -1.56
PRPF40BQ6NWY9 AC087588.2-201ENST00000617667 426 ntBASIC5.3□□□□□ -1.56
PRPF40BQ6NWY9 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC5.3□□□□□ -1.56
PRPF40BQ6NWY9 AC106871.1-201ENST00000568324 3102 ntBASIC5.3□□□□□ -1.56
PRPF40BQ6NWY9 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC5.3□□□□□ -1.56
PRPF40BQ6NWY9 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PRPF40BQ6NWY9 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
PRPF40BQ6NWY9 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC5.29□□□□□ -1.56
PRPF40BQ6NWY9 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
PRPF40BQ6NWY9 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
PRPF40BQ6NWY9 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PRPF40BQ6NWY9 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC5.29□□□□□ -1.56
PRPF40BQ6NWY9 SAMMSON-213ENST00000641336 1521 ntBASIC5.29□□□□□ -1.56
PRPF40BQ6NWY9 AC116667.1-201ENST00000604855 2072 ntBASIC5.29□□□□□ -1.56
PRPF40BQ6NWY9 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
PRPF40BQ6NWY9 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PRPF40BQ6NWY9 SNORA63.1-201ENST00000362493 131 ntBASIC5.29□□□□□ -1.56
PRPF40BQ6NWY9 RNA5SP307-201ENST00000362863 116 ntBASIC5.29□□□□□ -1.56
PRPF40BQ6NWY9 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PRPF40BQ6NWY9 MIR449B-201ENST00000384995 97 ntBASIC5.29□□□□□ -1.56
PRPF40BQ6NWY9 HDGFP1-201ENST00000405943 252 ntBASIC5.29□□□□□ -1.56
PRPF40BQ6NWY9 Y_RNA.646-201ENST00000410980 101 ntBASIC5.29□□□□□ -1.56
PRPF40BQ6NWY9 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC5.29□□□□□ -1.56
PRPF40BQ6NWY9 AL138785.1-201ENST00000425821 331 ntBASIC5.29□□□□□ -1.56
PRPF40BQ6NWY9 RPL23AP83-201ENST00000434984 473 ntBASIC5.29□□□□□ -1.56
PRPF40BQ6NWY9 SNRPEP4-201ENST00000435815 279 ntBASIC5.29□□□□□ -1.56
PRPF40BQ6NWY9 RPL7P28-201ENST00000437739 740 ntBASIC5.29□□□□□ -1.56
PRPF40BQ6NWY9 AL500522.2-201ENST00000448562 343 ntBASIC5.29□□□□□ -1.56
PRPF40BQ6NWY9 AC010631.1-201ENST00000474150 156 ntBASIC5.29□□□□□ -1.56
PRPF40BQ6NWY9 AC012158.1-204ENST00000483430 465 ntBASIC5.29□□□□□ -1.56
PRPF40BQ6NWY9 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms