Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 AC092427.1-202ENST00000430569 476 ntBASIC2.68□□□□□ -1.98
ATL3Q6DD88 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.68□□□□□ -1.98
ATL3Q6DD88 snoU13.28-201ENST00000459235 104 ntBASIC2.68□□□□□ -1.98
ATL3Q6DD88 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC2.68□□□□□ -1.98
ATL3Q6DD88 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC2.68□□□□□ -1.98
ATL3Q6DD88 FAM172BP-201ENST00000487497 1089 ntBASIC2.68□□□□□ -1.98
ATL3Q6DD88 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.68□□□□□ -1.98
ATL3Q6DD88 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.68□□□□□ -1.98
ATL3Q6DD88 TPT1P8-201ENST00000510120 555 ntBASIC2.68□□□□□ -1.98
ATL3Q6DD88 AC008716.1-201ENST00000511084 513 ntBASIC2.68□□□□□ -1.98
ATL3Q6DD88 RNA5SP24-201ENST00000516478 95 ntBASIC2.68□□□□□ -1.98
ATL3Q6DD88 SNORA31.11-201ENST00000516528 139 ntBASIC2.68□□□□□ -1.98
ATL3Q6DD88 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
ATL3Q6DD88 UBTFL10-201ENST00000528532 562 ntBASIC2.68□□□□□ -1.98
ATL3Q6DD88 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.68□□□□□ -1.98
ATL3Q6DD88 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC2.68□□□□□ -1.98
ATL3Q6DD88 MTND4P33-201ENST00000556706 766 ntBASIC2.68□□□□□ -1.98
ATL3Q6DD88 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC2.68□□□□□ -1.98
ATL3Q6DD88 MIR3200-201ENST00000580767 85 ntBASIC2.68□□□□□ -1.98
ATL3Q6DD88 MIR5194-201ENST00000582634 120 ntBASIC2.68□□□□□ -1.98
ATL3Q6DD88 BNIP3P40-201ENST00000596017 556 ntBASIC2.68□□□□□ -1.98
ATL3Q6DD88 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.68□□□□□ -1.98
ATL3Q6DD88 AC006023.1-201ENST00000603944 259 ntBASIC2.68□□□□□ -1.98
ATL3Q6DD88 AC004067.1-201ENST00000608733 700 ntBASIC2.68□□□□□ -1.98
ATL3Q6DD88 AC092106.3-201ENST00000611308 722 ntBASIC2.68□□□□□ -1.98
ATL3Q6DD88 AC006213.4-201ENST00000616184 634 ntBASIC2.68□□□□□ -1.98
ATL3Q6DD88 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.68□□□□□ -1.98
ATL3Q6DD88 AC006927.4-201ENST00000639187 543 ntBASIC2.68□□□□□ -1.98
ATL3Q6DD88 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
ATL3Q6DD88 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
ATL3Q6DD88 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
ATL3Q6DD88 AC092447.10-201ENST00000620607 1652 ntBASIC2.67□□□□□ -1.98
ATL3Q6DD88 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
ATL3Q6DD88 RNU6-289P-201ENST00000364093 107 ntBASIC2.67□□□□□ -1.98
ATL3Q6DD88 RNU6-157P-201ENST00000383957 107 ntBASIC2.67□□□□□ -1.98
ATL3Q6DD88 RNU1-138P-201ENST00000384093 164 ntBASIC2.67□□□□□ -1.98
ATL3Q6DD88 RNA5SP354-201ENST00000391247 136 ntBASIC2.67□□□□□ -1.98
ATL3Q6DD88 RNU6-757P-201ENST00000410334 100 ntBASIC2.67□□□□□ -1.98
ATL3Q6DD88 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.67□□□□□ -1.98
ATL3Q6DD88 USP9YP27-201ENST00000418455 438 ntBASIC2.67□□□□□ -1.98
ATL3Q6DD88 OR4K11P-201ENST00000431829 904 ntBASIC2.67□□□□□ -1.98
ATL3Q6DD88 AL512844.2-201ENST00000433990 593 ntBASIC2.67□□□□□ -1.98
ATL3Q6DD88 AL714022.1-201ENST00000439897 151 ntBASIC2.67□□□□□ -1.98
ATL3Q6DD88 MTND3P1-201ENST00000441336 220 ntBASIC2.67□□□□□ -1.98
ATL3Q6DD88 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.67□□□□□ -1.98
ATL3Q6DD88 MTND4LP3-201ENST00000468320 276 ntBASIC2.67□□□□□ -1.98
ATL3Q6DD88 AC104563.1-201ENST00000476147 376 ntBASIC2.67□□□□□ -1.98
ATL3Q6DD88 AC116337.2-201ENST00000477662 156 ntBASIC2.67□□□□□ -1.98
ATL3Q6DD88 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.67□□□□□ -1.98
ATL3Q6DD88 LINC00888-204ENST00000487386 421 ntBASIC2.67□□□□□ -1.98
ATL3Q6DD88 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.67□□□□□ -1.98
ATL3Q6DD88 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.67□□□□□ -1.98
ATL3Q6DD88 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.67□□□□□ -1.98
ATL3Q6DD88 AC107222.1-201ENST00000510899 637 ntBASIC2.67□□□□□ -1.98
ATL3Q6DD88 TTC39CP1-201ENST00000512513 755 ntBASIC2.67□□□□□ -1.98
ATL3Q6DD88 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.67□□□□□ -1.98
ATL3Q6DD88 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.67□□□□□ -1.98
ATL3Q6DD88 AP001372.4-201ENST00000524889 472 ntBASIC2.67□□□□□ -1.98
ATL3Q6DD88 AP000889.2-201ENST00000532684 490 ntBASIC2.67□□□□□ -1.98
ATL3Q6DD88 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
ATL3Q6DD88 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
ATL3Q6DD88 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.67□□□□□ -1.98
ATL3Q6DD88 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.67□□□□□ -1.98
ATL3Q6DD88 AC009163.5-201ENST00000575421 637 ntBASIC2.67□□□□□ -1.98
ATL3Q6DD88 MIR4319-201ENST00000577285 85 ntBASIC2.67□□□□□ -1.98
ATL3Q6DD88 MIR4446-201ENST00000578505 67 ntBASIC2.67□□□□□ -1.98
ATL3Q6DD88 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC2.67□□□□□ -1.98
ATL3Q6DD88 AC013553.2-201ENST00000604244 589 ntBASIC2.67□□□□□ -1.98
ATL3Q6DD88 AL450336.1-201ENST00000605180 586 ntBASIC2.67□□□□□ -1.98
ATL3Q6DD88 AC090186.1-201ENST00000605991 572 ntBASIC2.67□□□□□ -1.98
ATL3Q6DD88 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.67□□□□□ -1.98
ATL3Q6DD88 AC013476.2-201ENST00000614456 459 ntBASIC2.67□□□□□ -1.98
ATL3Q6DD88 MIR6817-201ENST00000615588 66 ntBASIC2.67□□□□□ -1.98
ATL3Q6DD88 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.67□□□□□ -1.98
ATL3Q6DD88 AC022960.3-201ENST00000619794 441 ntBASIC2.67□□□□□ -1.98
ATL3Q6DD88 AP000484.1-201ENST00000620067 1252 ntBASIC2.67□□□□□ -1.98
ATL3Q6DD88 AC073308.1-201ENST00000623696 305 ntBASIC2.67□□□□□ -1.98
ATL3Q6DD88 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC2.67□□□□□ -1.98
ATL3Q6DD88 SCARNA15.3-201ENST00000626315 122 ntBASIC2.67□□□□□ -1.98
ATL3Q6DD88 SCARNA4.1-201ENST00000628597 123 ntBASIC2.67□□□□□ -1.98
ATL3Q6DD88 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.67□□□□□ -1.98
ATL3Q6DD88 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.67□□□□□ -1.98
ATL3Q6DD88 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
ATL3Q6DD88 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
ATL3Q6DD88 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
ATL3Q6DD88 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
ATL3Q6DD88 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
ATL3Q6DD88 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
ATL3Q6DD88 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
ATL3Q6DD88 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
ATL3Q6DD88 SNORA80E-201ENST00000384744 137 ntBASIC2.66□□□□□ -1.98
ATL3Q6DD88 MIR196B-201ENST00000384852 84 ntBASIC2.66□□□□□ -1.98
ATL3Q6DD88 MIR513B-201ENST00000385136 84 ntBASIC2.66□□□□□ -1.98
ATL3Q6DD88 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
ATL3Q6DD88 AL591416.1-201ENST00000404015 867 ntBASIC2.66□□□□□ -1.98
ATL3Q6DD88 RNU6-193P-201ENST00000410977 107 ntBASIC2.66□□□□□ -1.98
ATL3Q6DD88 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.66□□□□□ -1.98
ATL3Q6DD88 CR769776.1-201ENST00000441254 787 ntBASIC2.66□□□□□ -1.98
ATL3Q6DD88 AL109933.2-201ENST00000452651 260 ntBASIC2.66□□□□□ -1.98
ATL3Q6DD88 MTND2P24-201ENST00000453434 806 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms