Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
PRPF38BQ5VTL8 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
PRPF38BQ5VTL8 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
PRPF38BQ5VTL8 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
PRPF38BQ5VTL8 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
PRPF38BQ5VTL8 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.71□□□□□ -1.5
PRPF38BQ5VTL8 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.7□□□□□ -1.5
PRPF38BQ5VTL8 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.7□□□□□ -1.5
PRPF38BQ5VTL8 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PRPF38BQ5VTL8 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PRPF38BQ5VTL8 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC5.7□□□□□ -1.5
PRPF38BQ5VTL8 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
PRPF38BQ5VTL8 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PRPF38BQ5VTL8 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.7□□□□□ -1.5
PRPF38BQ5VTL8 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.7□□□□□ -1.5
PRPF38BQ5VTL8 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
PRPF38BQ5VTL8 RNU6-227P-201ENST00000362865 103 ntBASIC5.7□□□□□ -1.5
PRPF38BQ5VTL8 RNU6-428P-201ENST00000362942 107 ntBASIC5.7□□□□□ -1.5
PRPF38BQ5VTL8 SNORA9-201ENST00000384215 133 ntBASIC5.7□□□□□ -1.5
PRPF38BQ5VTL8 SNORA68.2-201ENST00000391263 128 ntBASIC5.7□□□□□ -1.5
PRPF38BQ5VTL8 RPL23AP17-201ENST00000401064 499 ntBASIC5.7□□□□□ -1.5
PRPF38BQ5VTL8 AL079342.1-201ENST00000401460 267 ntBASIC5.7□□□□□ -1.5
PRPF38BQ5VTL8 AC007161.1-204ENST00000423039 460 ntBASIC5.7□□□□□ -1.5
PRPF38BQ5VTL8 MTCO1P39-201ENST00000426148 480 ntBASIC5.7□□□□□ -1.5
PRPF38BQ5VTL8 RPL21P40-201ENST00000428586 483 ntBASIC5.7□□□□□ -1.5
PRPF38BQ5VTL8 AL358472.1-201ENST00000431295 329 ntBASIC5.7□□□□□ -1.5
PRPF38BQ5VTL8 AL627311.1-201ENST00000431514 115 ntBASIC5.7□□□□□ -1.5
PRPF38BQ5VTL8 TRAPPC2P9-201ENST00000434556 343 ntBASIC5.7□□□□□ -1.5
PRPF38BQ5VTL8 PHBP16-201ENST00000446318 950 ntBASIC5.7□□□□□ -1.5
PRPF38BQ5VTL8 HIGD1AP2-201ENST00000446367 280 ntBASIC5.7□□□□□ -1.5
PRPF38BQ5VTL8 RPL21P13-201ENST00000488305 481 ntBASIC5.7□□□□□ -1.5
PRPF38BQ5VTL8 AC104164.2-201ENST00000496953 495 ntBASIC5.7□□□□□ -1.5
PRPF38BQ5VTL8 ANXA2P1-201ENST00000505539 926 ntBASIC5.7□□□□□ -1.5
PRPF38BQ5VTL8 RNU6-377P-201ENST00000515965 102 ntBASIC5.7□□□□□ -1.5
PRPF38BQ5VTL8 RN7SKP288-201ENST00000516227 268 ntBASIC5.7□□□□□ -1.5
PRPF38BQ5VTL8 RN7SKP276-201ENST00000516242 268 ntBASIC5.7□□□□□ -1.5
PRPF38BQ5VTL8 RN7SKP272-201ENST00000516988 232 ntBASIC5.7□□□□□ -1.5
PRPF38BQ5VTL8 AC010186.2-204ENST00000537668 439 ntBASIC5.7□□□□□ -1.5
PRPF38BQ5VTL8 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.7□□□□□ -1.5
PRPF38BQ5VTL8 AC023824.2-201ENST00000566185 400 ntBASIC5.7□□□□□ -1.5
PRPF38BQ5VTL8 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC5.7□□□□□ -1.5
PRPF38BQ5VTL8 FAM60BP-201ENST00000578364 658 ntBASIC5.7□□□□□ -1.5
PRPF38BQ5VTL8 MIR4420-201ENST00000583944 77 ntBASIC5.7□□□□□ -1.5
PRPF38BQ5VTL8 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.7□□□□□ -1.5
PRPF38BQ5VTL8 B3GNTL1P2-201ENST00000603673 288 ntBASIC5.7□□□□□ -1.5
PRPF38BQ5VTL8 AC240442.1-201ENST00000616055 283 ntBASIC5.7□□□□□ -1.5
PRPF38BQ5VTL8 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.7□□□□□ -1.5
PRPF38BQ5VTL8 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PRPF38BQ5VTL8 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PRPF38BQ5VTL8 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
PRPF38BQ5VTL8 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PRPF38BQ5VTL8 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.7□□□□□ -1.5
PRPF38BQ5VTL8 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PRPF38BQ5VTL8 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PRPF38BQ5VTL8 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC5.69□□□□□ -1.5
PRPF38BQ5VTL8 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PRPF38BQ5VTL8 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
PRPF38BQ5VTL8 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.69□□□□□ -1.5
PRPF38BQ5VTL8 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PRPF38BQ5VTL8 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC5.69□□□□□ -1.5
PRPF38BQ5VTL8 SAMMSON-226ENST00000642089 1582 ntBASIC5.69□□□□□ -1.5
PRPF38BQ5VTL8 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
PRPF38BQ5VTL8 MIR411-201ENST00000362239 96 ntBASIC5.69□□□□□ -1.5
PRPF38BQ5VTL8 RNU6-937P-201ENST00000384325 106 ntBASIC5.69□□□□□ -1.5
PRPF38BQ5VTL8 MIR34A-201ENST00000385130 110 ntBASIC5.69□□□□□ -1.5
PRPF38BQ5VTL8 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
PRPF38BQ5VTL8 SNORD78.2-201ENST00000391076 69 ntBASIC5.69□□□□□ -1.5
PRPF38BQ5VTL8 MIR1182-201ENST00000408363 97 ntBASIC5.69□□□□□ -1.5
PRPF38BQ5VTL8 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC5.69□□□□□ -1.5
PRPF38BQ5VTL8 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC5.69□□□□□ -1.5
PRPF38BQ5VTL8 GNG5P5-201ENST00000420444 220 ntBASIC5.69□□□□□ -1.5
PRPF38BQ5VTL8 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.69□□□□□ -1.5
PRPF38BQ5VTL8 RNU7-120P-201ENST00000459334 63 ntBASIC5.69□□□□□ -1.5
PRPF38BQ5VTL8 RN7SL188P-201ENST00000469842 285 ntBASIC5.69□□□□□ -1.5
PRPF38BQ5VTL8 IGHVII-62-1-201ENST00000519283 235 ntBASIC5.69□□□□□ -1.5
PRPF38BQ5VTL8 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PRPF38BQ5VTL8 CBX3P4-201ENST00000538909 354 ntBASIC5.69□□□□□ -1.5
PRPF38BQ5VTL8 MIR4643-201ENST00000577473 78 ntBASIC5.69□□□□□ -1.5
PRPF38BQ5VTL8 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.69□□□□□ -1.5
PRPF38BQ5VTL8 AC097372.5-201ENST00000623665 376 ntBASIC5.69□□□□□ -1.5
PRPF38BQ5VTL8 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.69□□□□□ -1.5
PRPF38BQ5VTL8 AP002512.4-202ENST00000641599 4530 ntBASIC5.69□□□□□ -1.5
PRPF38BQ5VTL8 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PRPF38BQ5VTL8 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
PRPF38BQ5VTL8 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC5.68□□□□□ -1.5
PRPF38BQ5VTL8 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.68□□□□□ -1.5
PRPF38BQ5VTL8 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
PRPF38BQ5VTL8 AL355834.1-201ENST00000556602 3965 ntBASIC5.68□□□□□ -1.5
PRPF38BQ5VTL8 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PRPF38BQ5VTL8 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.68□□□□□ -1.5
PRPF38BQ5VTL8 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
PRPF38BQ5VTL8 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC5.68□□□□□ -1.5
PRPF38BQ5VTL8 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
PRPF38BQ5VTL8 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PRPF38BQ5VTL8 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PRPF38BQ5VTL8 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC5.68□□□□□ -1.5
PRPF38BQ5VTL8 MAPK10-304ENST00000641341 3984 ntBASIC5.68□□□□□ -1.5
PRPF38BQ5VTL8 AC010266.2-201ENST00000564741 3255 ntBASIC5.68□□□□□ -1.5
PRPF38BQ5VTL8 SNORA63.1-201ENST00000362493 131 ntBASIC5.68□□□□□ -1.5
PRPF38BQ5VTL8 U3.3-201ENST00000362986 216 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms