Protein–RNA interactions for Protein: Q5SRE5

NUP188, Nucleoporin NUP188 homolog, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188Q5SRE5 AC133963.2-201ENST00000513686 578 ntBASIC1.54□□□□□ -2.16
NUP188Q5SRE5 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.54□□□□□ -2.16
NUP188Q5SRE5 SETP7-201ENST00000552169 453 ntBASIC1.54□□□□□ -2.16
NUP188Q5SRE5 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC1.54□□□□□ -2.16
NUP188Q5SRE5 AL713998.2-201ENST00000604538 1198 ntBASIC1.54□□□□□ -2.16
NUP188Q5SRE5 AC113194.1-201ENST00000606037 500 ntBASIC1.54□□□□□ -2.16
NUP188Q5SRE5 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
NUP188Q5SRE5 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
NUP188Q5SRE5 OR1L1-202ENST00000373686 1083 ntBASIC1.53□□□□□ -2.16
NUP188Q5SRE5 RNU6-1181P-201ENST00000384191 106 ntBASIC1.53□□□□□ -2.16
NUP188Q5SRE5 RNA5SP465-201ENST00000391195 109 ntBASIC1.53□□□□□ -2.16
NUP188Q5SRE5 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.53□□□□□ -2.16
NUP188Q5SRE5 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
NUP188Q5SRE5 AC021382.1-201ENST00000483523 359 ntBASIC1.53□□□□□ -2.16
NUP188Q5SRE5 MTCO3P35-201ENST00000485582 781 ntBASIC1.53□□□□□ -2.16
NUP188Q5SRE5 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC1.53□□□□□ -2.16
NUP188Q5SRE5 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.53□□□□□ -2.16
NUP188Q5SRE5 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC1.53□□□□□ -2.16
NUP188Q5SRE5 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC1.53□□□□□ -2.16
NUP188Q5SRE5 AC096772.1-201ENST00000609146 564 ntBASIC1.53□□□□□ -2.16
NUP188Q5SRE5 AC010809.3-201ENST00000621310 641 ntBASIC1.53□□□□□ -2.16
NUP188Q5SRE5 AL138955.1-201ENST00000622881 1040 ntBASIC1.53□□□□□ -2.16
NUP188Q5SRE5 Y_RNA.68-201ENST00000362881 102 ntBASIC1.52□□□□□ -2.17
NUP188Q5SRE5 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
NUP188Q5SRE5 AC093716.1-201ENST00000435923 377 ntBASIC1.52□□□□□ -2.17
NUP188Q5SRE5 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC1.52□□□□□ -2.17
NUP188Q5SRE5 MTND2P8-201ENST00000450555 1025 ntBASIC1.52□□□□□ -2.17
NUP188Q5SRE5 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC1.52□□□□□ -2.17
NUP188Q5SRE5 AC010285.1-201ENST00000470580 392 ntBASIC1.52□□□□□ -2.17
NUP188Q5SRE5 HMGB1P38-201ENST00000490557 577 ntBASIC1.52□□□□□ -2.17
NUP188Q5SRE5 RNU6-1073P-201ENST00000517182 106 ntBASIC1.52□□□□□ -2.17
NUP188Q5SRE5 MTCYBP41-201ENST00000528913 1123 ntBASIC1.52□□□□□ -2.17
NUP188Q5SRE5 OSBPL9P3-201ENST00000534523 595 ntBASIC1.52□□□□□ -2.17
NUP188Q5SRE5 HSBP1P1-201ENST00000555205 166 ntBASIC1.52□□□□□ -2.17
NUP188Q5SRE5 AC009090.3-201ENST00000616553 565 ntBASIC1.52□□□□□ -2.17
NUP188Q5SRE5 AL162373.1-201ENST00000620433 407 ntBASIC1.52□□□□□ -2.17
NUP188Q5SRE5 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC1.52□□□□□ -2.17
NUP188Q5SRE5 AC007342.9-201ENST00000623877 1385 ntBASIC1.52□□□□□ -2.17
NUP188Q5SRE5 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
NUP188Q5SRE5 SNORA81-201ENST00000408493 178 ntBASIC1.52□□□□□ -2.17
NUP188Q5SRE5 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.52□□□□□ -2.17
NUP188Q5SRE5 SDCBPP1-201ENST00000440192 890 ntBASIC1.52□□□□□ -2.17
NUP188Q5SRE5 AC087879.1-201ENST00000474343 374 ntBASIC1.52□□□□□ -2.17
NUP188Q5SRE5 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.52□□□□□ -2.17
NUP188Q5SRE5 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC1.52□□□□□ -2.17
NUP188Q5SRE5 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC1.52□□□□□ -2.17
NUP188Q5SRE5 AC112191.3-201ENST00000604371 277 ntBASIC1.52□□□□□ -2.17
NUP188Q5SRE5 AC135178.6-201ENST00000605314 398 ntBASIC1.52□□□□□ -2.17
NUP188Q5SRE5 AL391834.1-201ENST00000609609 560 ntBASIC1.52□□□□□ -2.17
NUP188Q5SRE5 AC139769.3-201ENST00000618383 175 ntBASIC1.52□□□□□ -2.17
NUP188Q5SRE5 AC020923.1-201ENST00000624021 917 ntBASIC1.52□□□□□ -2.17
NUP188Q5SRE5 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC1.52□□□□□ -2.17
NUP188Q5SRE5 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
NUP188Q5SRE5 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC1.51□□□□□ -2.17
NUP188Q5SRE5 ZNF90P2-204ENST00000419323 1075 ntBASIC1.51□□□□□ -2.17
NUP188Q5SRE5 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC1.51□□□□□ -2.17
NUP188Q5SRE5 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC1.51□□□□□ -2.17
NUP188Q5SRE5 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.51□□□□□ -2.17
NUP188Q5SRE5 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.51□□□□□ -2.17
NUP188Q5SRE5 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
NUP188Q5SRE5 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC1.51□□□□□ -2.17
NUP188Q5SRE5 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
NUP188Q5SRE5 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
NUP188Q5SRE5 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.51□□□□□ -2.17
NUP188Q5SRE5 AC024619.4-201ENST00000580924 316 ntBASIC1.51□□□□□ -2.17
NUP188Q5SRE5 MTND4P27-201ENST00000450813 1354 ntBASIC1.5□□□□□ -2.17
NUP188Q5SRE5 RPL7P27-201ENST00000403775 720 ntBASIC1.5□□□□□ -2.17
NUP188Q5SRE5 HNRNPDP2-201ENST00000406475 478 ntBASIC1.5□□□□□ -2.17
NUP188Q5SRE5 MIR1285-1-201ENST00000408593 84 ntBASIC1.5□□□□□ -2.17
NUP188Q5SRE5 CYCSP33-201ENST00000414485 327 ntBASIC1.5□□□□□ -2.17
NUP188Q5SRE5 CYCSP48-201ENST00000417124 323 ntBASIC1.5□□□□□ -2.17
NUP188Q5SRE5 PGBD4P6-201ENST00000421501 610 ntBASIC1.5□□□□□ -2.17
NUP188Q5SRE5 LARP7P4-201ENST00000481075 878 ntBASIC1.5□□□□□ -2.17
NUP188Q5SRE5 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.5□□□□□ -2.17
NUP188Q5SRE5 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.5□□□□□ -2.17
NUP188Q5SRE5 AC114322.1-201ENST00000506771 926 ntBASIC1.5□□□□□ -2.17
NUP188Q5SRE5 SMILR-201ENST00000533992 553 ntTSL 4 BASIC1.5□□□□□ -2.17
NUP188Q5SRE5 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC1.5□□□□□ -2.17
NUP188Q5SRE5 AC105245.1-201ENST00000581934 244 ntBASIC1.5□□□□□ -2.17
NUP188Q5SRE5 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC1.5□□□□□ -2.17
NUP188Q5SRE5 AC073592.7-201ENST00000623659 507 ntBASIC1.5□□□□□ -2.17
NUP188Q5SRE5 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
NUP188Q5SRE5 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
NUP188Q5SRE5 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.49□□□□□ -2.17
NUP188Q5SRE5 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.49□□□□□ -2.17
NUP188Q5SRE5 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC1.49□□□□□ -2.17
NUP188Q5SRE5 MGST1-215ENST00000540056 546 ntTSL 3 BASIC1.49□□□□□ -2.17
NUP188Q5SRE5 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC1.49□□□□□ -2.17
NUP188Q5SRE5 MTND4LP24-201ENST00000572277 291 ntBASIC1.49□□□□□ -2.17
NUP188Q5SRE5 UBE2L4-201ENST00000587688 464 ntBASIC1.49□□□□□ -2.17
NUP188Q5SRE5 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
NUP188Q5SRE5 MIR6076-201ENST00000617521 113 ntBASIC1.49□□□□□ -2.17
NUP188Q5SRE5 FAM157B-203ENST00000639350 358 ntBASIC1.49□□□□□ -2.17
NUP188Q5SRE5 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.49□□□□□ -2.17
NUP188Q5SRE5 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
NUP188Q5SRE5 RPL21P32-201ENST00000419877 477 ntBASIC1.49□□□□□ -2.17
NUP188Q5SRE5 AC023347.2-201ENST00000433994 462 ntBASIC1.49□□□□□ -2.17
NUP188Q5SRE5 AL691517.1-201ENST00000440833 1235 ntBASIC1.49□□□□□ -2.17
NUP188Q5SRE5 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC1.49□□□□□ -2.17
NUP188Q5SRE5 AC234775.1-201ENST00000454247 670 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 140.5 ms