Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 HMGN2P39-201ENST00000398005 273 ntBASIC1.45□□□□□ -2.18
CCDC58Q4VC31 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC1.45□□□□□ -2.18
CCDC58Q4VC31 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.45□□□□□ -2.18
CCDC58Q4VC31 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.45□□□□□ -2.18
CCDC58Q4VC31 RPS3AP44-201ENST00000425466 790 ntBASIC1.45□□□□□ -2.18
CCDC58Q4VC31 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
CCDC58Q4VC31 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.45□□□□□ -2.18
CCDC58Q4VC31 UBE2D3P1-201ENST00000436669 444 ntBASIC1.45□□□□□ -2.18
CCDC58Q4VC31 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
CCDC58Q4VC31 RPL30P9-201ENST00000465586 330 ntBASIC1.45□□□□□ -2.18
CCDC58Q4VC31 TPT1P8-201ENST00000510120 555 ntBASIC1.45□□□□□ -2.18
CCDC58Q4VC31 AC008549.1-201ENST00000512900 643 ntBASIC1.45□□□□□ -2.18
CCDC58Q4VC31 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC1.45□□□□□ -2.18
CCDC58Q4VC31 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.45□□□□□ -2.18
CCDC58Q4VC31 AC084033.1-201ENST00000550830 633 ntBASIC1.45□□□□□ -2.18
CCDC58Q4VC31 AC068944.2-201ENST00000610373 403 ntBASIC1.45□□□□□ -2.18
CCDC58Q4VC31 AC087241.4-201ENST00000612441 480 ntBASIC1.45□□□□□ -2.18
CCDC58Q4VC31 HPVC1-201ENST00000629899 1198 ntBASIC1.45□□□□□ -2.18
CCDC58Q4VC31 AL161722.3-201ENST00000605789 2983 ntBASIC1.45□□□□□ -2.18
CCDC58Q4VC31 MTND5P31-201ENST00000419366 1374 ntBASIC1.45□□□□□ -2.18
CCDC58Q4VC31 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.45□□□□□ -2.18
CCDC58Q4VC31 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
CCDC58Q4VC31 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
CCDC58Q4VC31 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
CCDC58Q4VC31 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC1.44□□□□□ -2.18
CCDC58Q4VC31 MIR649-201ENST00000384843 97 ntBASIC1.44□□□□□ -2.18
CCDC58Q4VC31 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
CCDC58Q4VC31 MCTS2P-201ENST00000394552 546 ntBASIC1.44□□□□□ -2.18
CCDC58Q4VC31 AL356421.1-201ENST00000403255 413 ntBASIC1.44□□□□□ -2.18
CCDC58Q4VC31 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC1.44□□□□□ -2.18
CCDC58Q4VC31 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
CCDC58Q4VC31 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.44□□□□□ -2.18
CCDC58Q4VC31 AC024082.2-201ENST00000434771 238 ntBASIC1.44□□□□□ -2.18
CCDC58Q4VC31 AC118469.1-201ENST00000442943 488 ntBASIC1.44□□□□□ -2.18
CCDC58Q4VC31 AC068135.1-201ENST00000446164 246 ntBASIC1.44□□□□□ -2.18
CCDC58Q4VC31 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC1.44□□□□□ -2.18
CCDC58Q4VC31 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.44□□□□□ -2.18
CCDC58Q4VC31 RPL23AP63-201ENST00000498752 471 ntBASIC1.44□□□□□ -2.18
CCDC58Q4VC31 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC1.44□□□□□ -2.18
CCDC58Q4VC31 AC109471.1-201ENST00000511631 612 ntBASIC1.44□□□□□ -2.18
CCDC58Q4VC31 RNU5A-7P-201ENST00000515979 116 ntBASIC1.44□□□□□ -2.18
CCDC58Q4VC31 RNU6-27P-201ENST00000516146 107 ntBASIC1.44□□□□□ -2.18
CCDC58Q4VC31 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC1.44□□□□□ -2.18
CCDC58Q4VC31 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.44□□□□□ -2.18
CCDC58Q4VC31 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC1.44□□□□□ -2.18
CCDC58Q4VC31 HAUS1P3-201ENST00000523909 662 ntBASIC1.44□□□□□ -2.18
CCDC58Q4VC31 MIR4255-201ENST00000579351 72 ntBASIC1.44□□□□□ -2.18
CCDC58Q4VC31 AC013553.2-201ENST00000604244 589 ntBASIC1.44□□□□□ -2.18
CCDC58Q4VC31 AC008498.1-201ENST00000613012 531 ntBASIC1.44□□□□□ -2.18
CCDC58Q4VC31 AC104763.3-201ENST00000613765 618 ntBASIC1.44□□□□□ -2.18
CCDC58Q4VC31 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.44□□□□□ -2.18
CCDC58Q4VC31 AC110994.2-201ENST00000635481 492 ntBASIC1.44□□□□□ -2.18
CCDC58Q4VC31 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
CCDC58Q4VC31 AP000648.3-201ENST00000623539 4507 ntBASIC1.44□□□□□ -2.18
CCDC58Q4VC31 NUP58P1-201ENST00000502546 1738 ntBASIC1.43□□□□□ -2.18
CCDC58Q4VC31 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC1.43□□□□□ -2.18
CCDC58Q4VC31 AL356473.1-201ENST00000406203 1408 ntBASIC1.43□□□□□ -2.18
CCDC58Q4VC31 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
CCDC58Q4VC31 RNU6-921P-201ENST00000384361 107 ntBASIC1.43□□□□□ -2.18
CCDC58Q4VC31 RNU6-1140P-201ENST00000410517 106 ntBASIC1.43□□□□□ -2.18
CCDC58Q4VC31 MTCO3P46-201ENST00000425787 232 ntBASIC1.43□□□□□ -2.18
CCDC58Q4VC31 SDAD1P3-201ENST00000427380 333 ntBASIC1.43□□□□□ -2.18
CCDC58Q4VC31 AL590383.1-201ENST00000428602 75 ntBASIC1.43□□□□□ -2.18
CCDC58Q4VC31 PABPC1P3-201ENST00000469174 459 ntBASIC1.43□□□□□ -2.18
CCDC58Q4VC31 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC1.43□□□□□ -2.18
CCDC58Q4VC31 AC093752.1-206ENST00000511823 336 ntBASIC1.43□□□□□ -2.18
CCDC58Q4VC31 RNA5SP137-201ENST00000516833 135 ntBASIC1.43□□□□□ -2.18
CCDC58Q4VC31 OR8K4P-201ENST00000534608 872 ntBASIC1.43□□□□□ -2.18
CCDC58Q4VC31 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.43□□□□□ -2.18
CCDC58Q4VC31 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC1.43□□□□□ -2.18
CCDC58Q4VC31 AC106782.4-201ENST00000568264 210 ntBASIC1.43□□□□□ -2.18
CCDC58Q4VC31 AC069294.1-201ENST00000608397 350 ntBASIC1.43□□□□□ -2.18
CCDC58Q4VC31 MIR7974-201ENST00000615835 79 ntBASIC1.43□□□□□ -2.18
CCDC58Q4VC31 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.43□□□□□ -2.18
CCDC58Q4VC31 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.43□□□□□ -2.18
CCDC58Q4VC31 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.43□□□□□ -2.18
CCDC58Q4VC31 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.42□□□□□ -2.18
CCDC58Q4VC31 UBE2L2-201ENST00000254302 429 ntBASIC1.42□□□□□ -2.18
CCDC58Q4VC31 U3.13-201ENST00000364804 214 ntBASIC1.42□□□□□ -2.18
CCDC58Q4VC31 SNORD82-201ENST00000365530 70 ntBASIC1.42□□□□□ -2.18
CCDC58Q4VC31 Z98749.2-208ENST00000381646 500 ntBASIC1.42□□□□□ -2.18
CCDC58Q4VC31 RNU6-253P-201ENST00000384730 105 ntBASIC1.42□□□□□ -2.18
CCDC58Q4VC31 RNU6-750P-201ENST00000390946 107 ntBASIC1.42□□□□□ -2.18
CCDC58Q4VC31 RN7SKP101-201ENST00000411376 320 ntBASIC1.42□□□□□ -2.18
CCDC58Q4VC31 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC1.42□□□□□ -2.18
CCDC58Q4VC31 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC1.42□□□□□ -2.18
CCDC58Q4VC31 AC098862.1-201ENST00000504991 413 ntBASIC1.42□□□□□ -2.18
CCDC58Q4VC31 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.42□□□□□ -2.18
CCDC58Q4VC31 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC1.42□□□□□ -2.18
CCDC58Q4VC31 ARL2BPP2-201ENST00000550907 489 ntBASIC1.42□□□□□ -2.18
CCDC58Q4VC31 MIR4648-201ENST00000580107 72 ntBASIC1.42□□□□□ -2.18
CCDC58Q4VC31 AC015688.2-201ENST00000584523 262 ntBASIC1.42□□□□□ -2.18
CCDC58Q4VC31 AC098679.5-201ENST00000624394 571 ntBASIC1.42□□□□□ -2.18
CCDC58Q4VC31 ZNF876P-202ENST00000398732 1485 ntBASIC1.42□□□□□ -2.18
CCDC58Q4VC31 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.42□□□□□ -2.18
CCDC58Q4VC31 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.42□□□□□ -2.18
CCDC58Q4VC31 SNORA8-201ENST00000384574 139 ntBASIC1.41□□□□□ -2.18
CCDC58Q4VC31 AC016769.3-201ENST00000396562 315 ntBASIC1.41□□□□□ -2.18
CCDC58Q4VC31 UBE2V1P2-201ENST00000397758 440 ntBASIC1.41□□□□□ -2.18
CCDC58Q4VC31 AL356131.1-201ENST00000405826 414 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 133.4 ms