Protein–RNA interactions for Protein: Q2M329

CCDC96, Coiled-coil domain-containing protein 96, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC96Q2M329 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC96Q2M329 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC96Q2M329 U8.9-201ENST00000365667 134 ntBASIC3.66□□□□□ -1.82
CCDC96Q2M329 SNORA7.4-201ENST00000384249 137 ntBASIC3.66□□□□□ -1.82
CCDC96Q2M329 RN7SKP123-201ENST00000410732 291 ntBASIC3.66□□□□□ -1.82
CCDC96Q2M329 AC096664.2-201ENST00000411843 406 ntBASIC3.66□□□□□ -1.82
CCDC96Q2M329 HMGB1P11-201ENST00000413899 637 ntBASIC3.66□□□□□ -1.82
CCDC96Q2M329 AC245291.1-201ENST00000419501 328 ntBASIC3.66□□□□□ -1.82
CCDC96Q2M329 PPP1R11P2-201ENST00000423543 382 ntBASIC3.66□□□□□ -1.82
CCDC96Q2M329 TAAR7P-201ENST00000436141 242 ntBASIC3.66□□□□□ -1.82
CCDC96Q2M329 LSM1P1-201ENST00000438629 273 ntBASIC3.66□□□□□ -1.82
CCDC96Q2M329 Z96811.1-201ENST00000445880 108 ntBASIC3.66□□□□□ -1.82
CCDC96Q2M329 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.66□□□□□ -1.82
CCDC96Q2M329 SNRPGP9-201ENST00000456025 225 ntBASIC3.66□□□□□ -1.82
CCDC96Q2M329 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.66□□□□□ -1.82
CCDC96Q2M329 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.66□□□□□ -1.82
CCDC96Q2M329 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.66□□□□□ -1.82
CCDC96Q2M329 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC96Q2M329 AC079140.3-201ENST00000511111 550 ntBASIC3.66□□□□□ -1.82
CCDC96Q2M329 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC96Q2M329 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.66□□□□□ -1.82
CCDC96Q2M329 SCARNA15.2-201ENST00000516409 127 ntBASIC3.66□□□□□ -1.82
CCDC96Q2M329 SNORA64.4-201ENST00000516632 81 ntBASIC3.66□□□□□ -1.82
CCDC96Q2M329 SNORA31.22-201ENST00000517204 135 ntBASIC3.66□□□□□ -1.82
CCDC96Q2M329 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.66□□□□□ -1.82
CCDC96Q2M329 AP000873.5-201ENST00000533906 236 ntBASIC3.66□□□□□ -1.82
CCDC96Q2M329 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.66□□□□□ -1.82
CCDC96Q2M329 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC96Q2M329 MIR544B-201ENST00000582372 78 ntBASIC3.66□□□□□ -1.82
CCDC96Q2M329 AC083760.1-201ENST00000589621 670 ntBASIC3.66□□□□□ -1.82
CCDC96Q2M329 AC019159.1-201ENST00000605094 187 ntBASIC3.66□□□□□ -1.82
CCDC96Q2M329 AC239868.4-201ENST00000608318 671 ntBASIC3.66□□□□□ -1.82
CCDC96Q2M329 DLEU2_1.1-201ENST00000612089 120 ntBASIC3.66□□□□□ -1.82
CCDC96Q2M329 DLEU2_1.2-201ENST00000614667 120 ntBASIC3.66□□□□□ -1.82
CCDC96Q2M329 ATP5A1P2-202ENST00000616464 443 ntBASIC3.66□□□□□ -1.82
CCDC96Q2M329 AC025048.6-202ENST00000627667 438 ntBASIC3.66□□□□□ -1.82
CCDC96Q2M329 AL355596.1-201ENST00000565399 3996 ntBASIC3.66□□□□□ -1.82
CCDC96Q2M329 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.66□□□□□ -1.82
CCDC96Q2M329 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC96Q2M329 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC96Q2M329 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
CCDC96Q2M329 AC004972.1-201ENST00000623934 2209 ntBASIC3.65□□□□□ -1.83
CCDC96Q2M329 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.65□□□□□ -1.83
CCDC96Q2M329 FGF7P2-201ENST00000332473 296 ntBASIC3.65□□□□□ -1.83
CCDC96Q2M329 SNORD56.5-201ENST00000364281 72 ntBASIC3.65□□□□□ -1.83
CCDC96Q2M329 RNU6-637P-201ENST00000384050 107 ntBASIC3.65□□□□□ -1.83
CCDC96Q2M329 SNORA75-201ENST00000384158 137 ntBASIC3.65□□□□□ -1.83
CCDC96Q2M329 RNU6-769P-201ENST00000384407 104 ntBASIC3.65□□□□□ -1.83
CCDC96Q2M329 AL138885.1-201ENST00000405921 675 ntBASIC3.65□□□□□ -1.83
CCDC96Q2M329 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.65□□□□□ -1.83
CCDC96Q2M329 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC3.65□□□□□ -1.83
CCDC96Q2M329 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC3.65□□□□□ -1.83
CCDC96Q2M329 DLGAP5P1-201ENST00000430307 464 ntBASIC3.65□□□□□ -1.83
CCDC96Q2M329 OR4K11P-201ENST00000431829 904 ntBASIC3.65□□□□□ -1.83
CCDC96Q2M329 AC109583.1-201ENST00000432156 268 ntBASIC3.65□□□□□ -1.83
CCDC96Q2M329 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.65□□□□□ -1.83
CCDC96Q2M329 AC108734.1-201ENST00000439549 399 ntBASIC3.65□□□□□ -1.83
CCDC96Q2M329 AC092473.1-201ENST00000441098 221 ntBASIC3.65□□□□□ -1.83
CCDC96Q2M329 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.65□□□□□ -1.83
CCDC96Q2M329 AP000797.1-201ENST00000478870 387 ntBASIC3.65□□□□□ -1.83
CCDC96Q2M329 AL049874.1-201ENST00000489560 388 ntBASIC3.65□□□□□ -1.83
CCDC96Q2M329 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.65□□□□□ -1.83
CCDC96Q2M329 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.65□□□□□ -1.83
CCDC96Q2M329 RNU6-1282P-201ENST00000516735 96 ntBASIC3.65□□□□□ -1.83
CCDC96Q2M329 AC104027.1-201ENST00000521887 300 ntBASIC3.65□□□□□ -1.83
CCDC96Q2M329 AC124947.2-202ENST00000552735 133 ntBASIC3.65□□□□□ -1.83
CCDC96Q2M329 AC006362.1-201ENST00000567392 174 ntBASIC3.65□□□□□ -1.83
CCDC96Q2M329 HMGB1P6-201ENST00000569046 646 ntBASIC3.65□□□□□ -1.83
CCDC96Q2M329 MIR4307-201ENST00000582802 84 ntBASIC3.65□□□□□ -1.83
CCDC96Q2M329 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.65□□□□□ -1.83
CCDC96Q2M329 AC068276.1-201ENST00000605793 379 ntBASIC3.65□□□□□ -1.83
CCDC96Q2M329 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.65□□□□□ -1.83
CCDC96Q2M329 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
CCDC96Q2M329 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
CCDC96Q2M329 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
CCDC96Q2M329 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC96Q2M329 RNU6-805P-201ENST00000365643 106 ntBASIC3.64□□□□□ -1.83
CCDC96Q2M329 RNU6-1207P-201ENST00000384343 107 ntBASIC3.64□□□□□ -1.83
CCDC96Q2M329 RNY3P10-201ENST00000384764 102 ntBASIC3.64□□□□□ -1.83
CCDC96Q2M329 MIR514A1-201ENST00000385133 98 ntBASIC3.64□□□□□ -1.83
CCDC96Q2M329 SNORD67-201ENST00000390833 111 ntBASIC3.64□□□□□ -1.83
CCDC96Q2M329 AL356421.1-201ENST00000403255 413 ntBASIC3.64□□□□□ -1.83
CCDC96Q2M329 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC96Q2M329 RNA5SP492-201ENST00000411330 114 ntBASIC3.64□□□□□ -1.83
CCDC96Q2M329 CDK8P2-201ENST00000415020 547 ntBASIC3.64□□□□□ -1.83
CCDC96Q2M329 SPA17P1-201ENST00000416656 452 ntBASIC3.64□□□□□ -1.83
CCDC96Q2M329 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.64□□□□□ -1.83
CCDC96Q2M329 MTCO2P34-201ENST00000421994 607 ntBASIC3.64□□□□□ -1.83
CCDC96Q2M329 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC96Q2M329 AC008850.1-201ENST00000427546 362 ntBASIC3.64□□□□□ -1.83
CCDC96Q2M329 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.64□□□□□ -1.83
CCDC96Q2M329 AL831737.1-201ENST00000441288 271 ntBASIC3.64□□□□□ -1.83
CCDC96Q2M329 USP9YP29-201ENST00000445112 563 ntBASIC3.64□□□□□ -1.83
CCDC96Q2M329 GDI2P2-201ENST00000445131 608 ntBASIC3.64□□□□□ -1.83
CCDC96Q2M329 AC016696.1-201ENST00000446949 318 ntBASIC3.64□□□□□ -1.83
CCDC96Q2M329 PAXBP1P1-201ENST00000449315 447 ntBASIC3.64□□□□□ -1.83
CCDC96Q2M329 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC96Q2M329 RNU6-956P-201ENST00000458868 103 ntBASIC3.64□□□□□ -1.83
CCDC96Q2M329 AC021382.1-201ENST00000483523 359 ntBASIC3.64□□□□□ -1.83
CCDC96Q2M329 HMGB1P36-201ENST00000487709 576 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms