Protein–RNA interactions for Protein: Q07065

CKAP4, Cytoskeleton-associated protein 4, humanhuman

Known RBP Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4Q07065 AL445264.1-201ENST00000621719 171 ntBASIC2.58□□□□□ -2
CKAP4Q07065 AC139792.2-201ENST00000624218 587 ntBASIC2.58□□□□□ -2
CKAP4Q07065 AC034229.5-201ENST00000624258 185 ntBASIC2.58□□□□□ -2
CKAP4Q07065 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.58□□□□□ -2
CKAP4Q07065 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.58□□□□□ -2
CKAP4Q07065 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
CKAP4Q07065 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.58□□□□□ -2
CKAP4Q07065 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.58□□□□□ -2
CKAP4Q07065 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.58□□□□□ -2
CKAP4Q07065 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
CKAP4Q07065 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC2.57□□□□□ -2
CKAP4Q07065 RNU6-777P-201ENST00000364265 104 ntBASIC2.57□□□□□ -2
CKAP4Q07065 RNU6-343P-201ENST00000364709 104 ntBASIC2.57□□□□□ -2
CKAP4Q07065 RNU1-140P-201ENST00000365040 165 ntBASIC2.57□□□□□ -2
CKAP4Q07065 SNORA1.3-201ENST00000384676 136 ntBASIC2.57□□□□□ -2
CKAP4Q07065 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
CKAP4Q07065 RN7SKP266-201ENST00000410232 287 ntBASIC2.57□□□□□ -2
CKAP4Q07065 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.57□□□□□ -2
CKAP4Q07065 BTF3L4P1-201ENST00000413813 468 ntBASIC2.57□□□□□ -2
CKAP4Q07065 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.57□□□□□ -2
CKAP4Q07065 USP9YP27-201ENST00000418455 438 ntBASIC2.57□□□□□ -2
CKAP4Q07065 CYCSP46-201ENST00000423569 204 ntBASIC2.57□□□□□ -2
CKAP4Q07065 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.57□□□□□ -2
CKAP4Q07065 AL035410.1-201ENST00000427409 427 ntBASIC2.57□□□□□ -2
CKAP4Q07065 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.57□□□□□ -2
CKAP4Q07065 EZH2P1-201ENST00000431167 291 ntBASIC2.57□□□□□ -2
CKAP4Q07065 AC010153.1-201ENST00000432862 727 ntBASIC2.57□□□□□ -2
CKAP4Q07065 MTCO2P16-201ENST00000436962 677 ntBASIC2.57□□□□□ -2
CKAP4Q07065 SNRPEP7-201ENST00000438350 220 ntBASIC2.57□□□□□ -2
CKAP4Q07065 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC2.57□□□□□ -2
CKAP4Q07065 AL360221.1-201ENST00000445989 335 ntBASIC2.57□□□□□ -2
CKAP4Q07065 ZNF114P1-201ENST00000453500 292 ntBASIC2.57□□□□□ -2
CKAP4Q07065 SEM1P1-201ENST00000506694 209 ntBASIC2.57□□□□□ -2
CKAP4Q07065 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.57□□□□□ -2
CKAP4Q07065 SAP18P1-201ENST00000512058 390 ntBASIC2.57□□□□□ -2
CKAP4Q07065 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.57□□□□□ -2
CKAP4Q07065 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.57□□□□□ -2
CKAP4Q07065 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CKAP4Q07065 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC2.57□□□□□ -2
CKAP4Q07065 AC060788.1-201ENST00000521318 469 ntBASIC2.57□□□□□ -2
CKAP4Q07065 SNRPGP16-201ENST00000533275 226 ntBASIC2.57□□□□□ -2
CKAP4Q07065 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.57□□□□□ -2
CKAP4Q07065 AC079600.2-201ENST00000550076 130 ntBASIC2.57□□□□□ -2
CKAP4Q07065 AC024909.2-201ENST00000553035 286 ntBASIC2.57□□□□□ -2
CKAP4Q07065 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC2.57□□□□□ -2
CKAP4Q07065 PCMTD1P2-201ENST00000565017 355 ntBASIC2.57□□□□□ -2
CKAP4Q07065 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC2.57□□□□□ -2
CKAP4Q07065 AP000403.1-201ENST00000603349 851 ntBASIC2.57□□□□□ -2
CKAP4Q07065 AP001330.4-201ENST00000604350 154 ntBASIC2.57□□□□□ -2
CKAP4Q07065 AC064872.1-201ENST00000604823 1072 ntBASIC2.57□□□□□ -2
CKAP4Q07065 AL031775.1-201ENST00000607014 887 ntBASIC2.57□□□□□ -2
CKAP4Q07065 AC107214.2-201ENST00000608204 634 ntBASIC2.57□□□□□ -2
CKAP4Q07065 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.57□□□□□ -2
CKAP4Q07065 AL356266.1-201ENST00000623311 483 ntBASIC2.57□□□□□ -2
CKAP4Q07065 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.57□□□□□ -2
CKAP4Q07065 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC2.57□□□□□ -2
CKAP4Q07065 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.57□□□□□ -2
CKAP4Q07065 AL022578.1-201ENST00000439330 1433 ntBASIC2.57□□□□□ -2
CKAP4Q07065 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.57□□□□□ -2
CKAP4Q07065 AC007336.1-201ENST00000576365 3828 ntBASIC2.56□□□□□ -2
CKAP4Q07065 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CKAP4Q07065 AC099654.7-201ENST00000635788 2127 ntBASIC2.56□□□□□ -2
CKAP4Q07065 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
CKAP4Q07065 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CKAP4Q07065 RNU6-501P-201ENST00000364072 100 ntBASIC2.56□□□□□ -2
CKAP4Q07065 RNA5SP139-201ENST00000364340 117 ntBASIC2.56□□□□□ -2
CKAP4Q07065 MIR134-201ENST00000385258 73 ntBASIC2.56□□□□□ -2
CKAP4Q07065 SLC9B1P2-201ENST00000398120 1184 ntBASIC2.56□□□□□ -2
CKAP4Q07065 MTND4LP20-201ENST00000402379 270 ntBASIC2.56□□□□□ -2
CKAP4Q07065 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC2.56□□□□□ -2
CKAP4Q07065 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.56□□□□□ -2
CKAP4Q07065 FNDC3CP-201ENST00000420795 1155 ntBASIC2.56□□□□□ -2
CKAP4Q07065 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.56□□□□□ -2
CKAP4Q07065 AL365184.2-201ENST00000431139 435 ntBASIC2.56□□□□□ -2
CKAP4Q07065 THAP5P1-201ENST00000439089 262 ntBASIC2.56□□□□□ -2
CKAP4Q07065 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC2.56□□□□□ -2
CKAP4Q07065 RPS24P13-201ENST00000442520 397 ntBASIC2.56□□□□□ -2
CKAP4Q07065 AC104389.3-201ENST00000445629 235 ntBASIC2.56□□□□□ -2
CKAP4Q07065 EPS15P1-201ENST00000448836 336 ntBASIC2.56□□□□□ -2
CKAP4Q07065 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC2.56□□□□□ -2
CKAP4Q07065 AC234775.1-201ENST00000454247 670 ntBASIC2.56□□□□□ -2
CKAP4Q07065 SUMO2P2-201ENST00000456482 255 ntBASIC2.56□□□□□ -2
CKAP4Q07065 AP001992.1-205ENST00000462248 379 ntBASIC2.56□□□□□ -2
CKAP4Q07065 AL358832.1-201ENST00000497800 389 ntBASIC2.56□□□□□ -2
CKAP4Q07065 AC091435.1-201ENST00000505442 584 ntBASIC2.56□□□□□ -2
CKAP4Q07065 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC2.56□□□□□ -2
CKAP4Q07065 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.56□□□□□ -2
CKAP4Q07065 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.56□□□□□ -2
CKAP4Q07065 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.56□□□□□ -2
CKAP4Q07065 AC096725.1-201ENST00000514266 313 ntBASIC2.56□□□□□ -2
CKAP4Q07065 RNA5SP341-201ENST00000516261 117 ntBASIC2.56□□□□□ -2
CKAP4Q07065 AC068587.4-201ENST00000533893 186 ntBASIC2.56□□□□□ -2
CKAP4Q07065 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC2.56□□□□□ -2
CKAP4Q07065 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC2.56□□□□□ -2
CKAP4Q07065 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.56□□□□□ -2
CKAP4Q07065 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.56□□□□□ -2
CKAP4Q07065 AC012414.6-201ENST00000568241 401 ntBASIC2.56□□□□□ -2
CKAP4Q07065 AC112187.2-201ENST00000604345 283 ntBASIC2.56□□□□□ -2
CKAP4Q07065 AC090186.1-201ENST00000605991 572 ntBASIC2.56□□□□□ -2
CKAP4Q07065 AC067747.1-201ENST00000608026 250 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 134.5 ms