Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.37□□□□□ -2.19
HIST1H1AQ02539 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC1.37□□□□□ -2.19
HIST1H1AQ02539 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.37□□□□□ -2.19
HIST1H1AQ02539 RPS15AP5-201ENST00000436276 388 ntBASIC1.37□□□□□ -2.19
HIST1H1AQ02539 HSPE1P21-201ENST00000438283 308 ntBASIC1.37□□□□□ -2.19
HIST1H1AQ02539 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC1.37□□□□□ -2.19
HIST1H1AQ02539 AC005297.2-201ENST00000450430 606 ntBASIC1.37□□□□□ -2.19
HIST1H1AQ02539 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.37□□□□□ -2.19
HIST1H1AQ02539 AC017007.3-201ENST00000479865 435 ntBASIC1.37□□□□□ -2.19
HIST1H1AQ02539 AC140059.1-201ENST00000489238 361 ntBASIC1.37□□□□□ -2.19
HIST1H1AQ02539 AC096745.1-201ENST00000509945 370 ntBASIC1.37□□□□□ -2.19
HIST1H1AQ02539 ATP5F1P7-201ENST00000567330 760 ntBASIC1.37□□□□□ -2.19
HIST1H1AQ02539 MIR4419B-201ENST00000577260 68 ntBASIC1.37□□□□□ -2.19
HIST1H1AQ02539 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC1.37□□□□□ -2.19
HIST1H1AQ02539 KATNBL1P1-201ENST00000605192 748 ntBASIC1.37□□□□□ -2.19
HIST1H1AQ02539 AC126118.1-201ENST00000607744 628 ntBASIC1.37□□□□□ -2.19
HIST1H1AQ02539 AC069294.1-201ENST00000608397 350 ntBASIC1.37□□□□□ -2.19
HIST1H1AQ02539 AL773524.1-201ENST00000614065 229 ntBASIC1.37□□□□□ -2.19
HIST1H1AQ02539 AC011330.2-201ENST00000621680 635 ntBASIC1.37□□□□□ -2.19
HIST1H1AQ02539 AP002791.1-201ENST00000623291 381 ntBASIC1.37□□□□□ -2.19
HIST1H1AQ02539 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
HIST1H1AQ02539 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
HIST1H1AQ02539 AC007785.2-201ENST00000598627 1916 ntBASIC1.36□□□□□ -2.19
HIST1H1AQ02539 AC016769.3-201ENST00000396562 315 ntBASIC1.36□□□□□ -2.19
HIST1H1AQ02539 EDDM3CP-201ENST00000415977 425 ntBASIC1.36□□□□□ -2.19
HIST1H1AQ02539 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.36□□□□□ -2.19
HIST1H1AQ02539 AC244636.1-201ENST00000421152 228 ntBASIC1.36□□□□□ -2.19
HIST1H1AQ02539 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC1.36□□□□□ -2.19
HIST1H1AQ02539 RPS3AP44-201ENST00000425466 790 ntBASIC1.36□□□□□ -2.19
HIST1H1AQ02539 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.36□□□□□ -2.19
HIST1H1AQ02539 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC1.36□□□□□ -2.19
HIST1H1AQ02539 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.36□□□□□ -2.19
HIST1H1AQ02539 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.36□□□□□ -2.19
HIST1H1AQ02539 FABP5P13-201ENST00000452144 328 ntBASIC1.36□□□□□ -2.19
HIST1H1AQ02539 MRPS17P3-201ENST00000465453 385 ntBASIC1.36□□□□□ -2.19
HIST1H1AQ02539 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC1.36□□□□□ -2.19
HIST1H1AQ02539 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
HIST1H1AQ02539 TRBV12-1-201ENST00000479785 344 ntBASIC1.36□□□□□ -2.19
HIST1H1AQ02539 RPL21P99-201ENST00000480369 423 ntBASIC1.36□□□□□ -2.19
HIST1H1AQ02539 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC1.36□□□□□ -2.19
HIST1H1AQ02539 AC007182.2-201ENST00000489251 402 ntBASIC1.36□□□□□ -2.19
HIST1H1AQ02539 AC093767.1-201ENST00000504523 156 ntBASIC1.36□□□□□ -2.19
HIST1H1AQ02539 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC1.36□□□□□ -2.19
HIST1H1AQ02539 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.36□□□□□ -2.19
HIST1H1AQ02539 AP002748.2-201ENST00000528671 348 ntBASIC1.36□□□□□ -2.19
HIST1H1AQ02539 AC091544.4-201ENST00000555268 342 ntBASIC1.36□□□□□ -2.19
HIST1H1AQ02539 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.36□□□□□ -2.19
HIST1H1AQ02539 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC1.36□□□□□ -2.19
HIST1H1AQ02539 MIR4648-201ENST00000580107 72 ntBASIC1.36□□□□□ -2.19
HIST1H1AQ02539 MIR4285-201ENST00000581001 85 ntBASIC1.36□□□□□ -2.19
HIST1H1AQ02539 AC080013.4-201ENST00000607624 649 ntBASIC1.36□□□□□ -2.19
HIST1H1AQ02539 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.36□□□□□ -2.19
HIST1H1AQ02539 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.35□□□□□ -2.19
HIST1H1AQ02539 PAPPA-AS1-201ENST00000445861 2450 ntBASIC1.35□□□□□ -2.19
HIST1H1AQ02539 MTCO1P4-201ENST00000520516 1409 ntBASIC1.35□□□□□ -2.19
HIST1H1AQ02539 RNA5SP363-201ENST00000365072 115 ntBASIC1.35□□□□□ -2.19
HIST1H1AQ02539 RPL7P27-201ENST00000403775 720 ntBASIC1.35□□□□□ -2.19
HIST1H1AQ02539 PTGES3P2-201ENST00000407942 482 ntBASIC1.35□□□□□ -2.19
HIST1H1AQ02539 AL357078.2-201ENST00000416486 427 ntBASIC1.35□□□□□ -2.19
HIST1H1AQ02539 PNRC2P1-201ENST00000423940 420 ntBASIC1.35□□□□□ -2.19
HIST1H1AQ02539 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.35□□□□□ -2.19
HIST1H1AQ02539 AC003989.2-201ENST00000440224 169 ntBASIC1.35□□□□□ -2.19
HIST1H1AQ02539 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.35□□□□□ -2.19
HIST1H1AQ02539 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
HIST1H1AQ02539 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
HIST1H1AQ02539 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC1.35□□□□□ -2.19
HIST1H1AQ02539 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.35□□□□□ -2.19
HIST1H1AQ02539 AC098591.2-201ENST00000510152 315 ntBASIC1.35□□□□□ -2.19
HIST1H1AQ02539 RNA5SP137-201ENST00000516833 135 ntBASIC1.35□□□□□ -2.19
HIST1H1AQ02539 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC1.35□□□□□ -2.19
HIST1H1AQ02539 MAL2-206ENST00000522187 547 ntTSL 4 BASIC1.35□□□□□ -2.19
HIST1H1AQ02539 ZNF705CP-201ENST00000530515 889 ntBASIC1.35□□□□□ -2.19
HIST1H1AQ02539 VBP1-203ENST00000535916 944 ntTSL 2 BASIC1.35□□□□□ -2.19
HIST1H1AQ02539 AC004217.3-201ENST00000551552 878 ntBASIC1.35□□□□□ -2.19
HIST1H1AQ02539 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC1.35□□□□□ -2.19
HIST1H1AQ02539 MTCYBP23-201ENST00000558717 1102 ntBASIC1.35□□□□□ -2.19
HIST1H1AQ02539 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.35□□□□□ -2.19
HIST1H1AQ02539 MIR3126-201ENST00000577443 74 ntBASIC1.35□□□□□ -2.19
HIST1H1AQ02539 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.35□□□□□ -2.19
HIST1H1AQ02539 AL078605.1-201ENST00000603529 500 ntBASIC1.35□□□□□ -2.19
HIST1H1AQ02539 AC242628.1-201ENST00000606810 391 ntBASIC1.35□□□□□ -2.19
HIST1H1AQ02539 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
HIST1H1AQ02539 AL589743.7-201ENST00000612637 233 ntBASIC1.35□□□□□ -2.19
HIST1H1AQ02539 AC104763.3-201ENST00000613765 618 ntBASIC1.35□□□□□ -2.19
HIST1H1AQ02539 AC006213.4-201ENST00000616184 634 ntBASIC1.35□□□□□ -2.19
HIST1H1AQ02539 AC012150.2-201ENST00000621300 544 ntBASIC1.35□□□□□ -2.19
HIST1H1AQ02539 AP003400.6-201ENST00000624698 740 ntBASIC1.35□□□□□ -2.19
HIST1H1AQ02539 MKKS-204ENST00000639674 192 ntBASIC1.35□□□□□ -2.19
HIST1H1AQ02539 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.34□□□□□ -2.19
HIST1H1AQ02539 ENSAP3-201ENST00000312710 333 ntBASIC1.34□□□□□ -2.19
HIST1H1AQ02539 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC1.34□□□□□ -2.19
HIST1H1AQ02539 MIR218-1-201ENST00000384999 110 ntBASIC1.34□□□□□ -2.19
HIST1H1AQ02539 HMGN2P39-201ENST00000398005 273 ntBASIC1.34□□□□□ -2.19
HIST1H1AQ02539 AL079342.1-201ENST00000401460 267 ntBASIC1.34□□□□□ -2.19
HIST1H1AQ02539 RNU2-17P-201ENST00000410290 190 ntBASIC1.34□□□□□ -2.19
HIST1H1AQ02539 RNU2-43P-201ENST00000410306 190 ntBASIC1.34□□□□□ -2.19
HIST1H1AQ02539 RNU2-49P-201ENST00000410666 184 ntBASIC1.34□□□□□ -2.19
HIST1H1AQ02539 VN1R36P-201ENST00000414936 291 ntBASIC1.34□□□□□ -2.19
HIST1H1AQ02539 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.34□□□□□ -2.19
HIST1H1AQ02539 PIGFP3-201ENST00000441918 722 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms