Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.42□□□□□ -1.7
YBX1P67809 IGKV1-32-201ENST00000519290 311 ntBASIC4.42□□□□□ -1.7
YBX1P67809 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.42□□□□□ -1.7
YBX1P67809 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC4.42□□□□□ -1.7
YBX1P67809 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
YBX1P67809 MIR5096-201ENST00000583713 70 ntBASIC4.42□□□□□ -1.7
YBX1P67809 AC125232.2-201ENST00000592457 143 ntBASIC4.42□□□□□ -1.7
YBX1P67809 AL031176.1-201ENST00000604554 466 ntBASIC4.42□□□□□ -1.7
YBX1P67809 IGHV3-29-201ENST00000604817 344 ntBASIC4.42□□□□□ -1.7
YBX1P67809 AC004805.2-201ENST00000605382 482 ntBASIC4.42□□□□□ -1.7
YBX1P67809 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
YBX1P67809 TUG1_2.1-201ENST00000614234 87 ntBASIC4.42□□□□□ -1.7
YBX1P67809 AC007998.5-201ENST00000622938 237 ntBASIC4.42□□□□□ -1.7
YBX1P67809 ZFRP1-201ENST00000457579 2970 ntBASIC4.42□□□□□ -1.7
YBX1P67809 ZNF137P-201ENST00000456718 1920 ntBASIC4.42□□□□□ -1.7
YBX1P67809 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
YBX1P67809 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
YBX1P67809 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.41□□□□□ -1.7
YBX1P67809 AC032011.1-201ENST00000611703 1549 ntBASIC4.41□□□□□ -1.7
YBX1P67809 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.41□□□□□ -1.7
YBX1P67809 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
YBX1P67809 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC4.41□□□□□ -1.7
YBX1P67809 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
YBX1P67809 MAPK10-263ENST00000641052 4307 ntBASIC4.41□□□□□ -1.7
YBX1P67809 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
YBX1P67809 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
YBX1P67809 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
YBX1P67809 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
YBX1P67809 AC126755.2-208ENST00000327792 462 ntBASIC4.41□□□□□ -1.7
YBX1P67809 AC138969.1-213ENST00000331436 462 ntBASIC4.41□□□□□ -1.7
YBX1P67809 SNORD14.1-201ENST00000365609 90 ntBASIC4.41□□□□□ -1.7
YBX1P67809 Y_RNA.461-201ENST00000384263 103 ntBASIC4.41□□□□□ -1.7
YBX1P67809 RNA5SP372-201ENST00000390836 115 ntBASIC4.41□□□□□ -1.7
YBX1P67809 RNU2-64P-201ENST00000411315 191 ntBASIC4.41□□□□□ -1.7
YBX1P67809 AC011933.1-201ENST00000413334 321 ntBASIC4.41□□□□□ -1.7
YBX1P67809 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC4.41□□□□□ -1.7
YBX1P67809 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.41□□□□□ -1.7
YBX1P67809 AL138785.1-201ENST00000425821 331 ntBASIC4.41□□□□□ -1.7
YBX1P67809 RPL21P91-201ENST00000429231 479 ntBASIC4.41□□□□□ -1.7
YBX1P67809 PSMA2P3-201ENST00000429685 675 ntBASIC4.41□□□□□ -1.7
YBX1P67809 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.41□□□□□ -1.7
YBX1P67809 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.41□□□□□ -1.7
YBX1P67809 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC4.41□□□□□ -1.7
YBX1P67809 RPL23AP93-201ENST00000440847 484 ntBASIC4.41□□□□□ -1.7
YBX1P67809 RNU6-1132P-201ENST00000459214 107 ntBASIC4.41□□□□□ -1.7
YBX1P67809 RPL9P32-201ENST00000464118 620 ntBASIC4.41□□□□□ -1.7
YBX1P67809 RPS23P3-201ENST00000470993 430 ntBASIC4.41□□□□□ -1.7
YBX1P67809 AC010631.1-201ENST00000474150 156 ntBASIC4.41□□□□□ -1.7
YBX1P67809 AC084198.1-201ENST00000477747 402 ntBASIC4.41□□□□□ -1.7
YBX1P67809 RPL21P103-201ENST00000479921 488 ntBASIC4.41□□□□□ -1.7
YBX1P67809 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC4.41□□□□□ -1.7
YBX1P67809 VN1R104P-201ENST00000505115 1009 ntBASIC4.41□□□□□ -1.7
YBX1P67809 Y_RNA.680-201ENST00000516441 93 ntBASIC4.41□□□□□ -1.7
YBX1P67809 Y_RNA.689-201ENST00000516589 107 ntBASIC4.41□□□□□ -1.7
YBX1P67809 CR383656.7-201ENST00000548164 174 ntBASIC4.41□□□□□ -1.7
YBX1P67809 AC091516.1-201ENST00000549191 703 ntBASIC4.41□□□□□ -1.7
YBX1P67809 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.41□□□□□ -1.7
YBX1P67809 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.41□□□□□ -1.7
YBX1P67809 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC4.41□□□□□ -1.7
YBX1P67809 AL161713.1-201ENST00000555538 145 ntBASIC4.41□□□□□ -1.7
YBX1P67809 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC4.41□□□□□ -1.7
YBX1P67809 Z98751.3-201ENST00000604447 521 ntBASIC4.41□□□□□ -1.7
YBX1P67809 MIR4496-201ENST00000635896 61 ntBASIC4.41□□□□□ -1.7
YBX1P67809 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.41□□□□□ -1.7
YBX1P67809 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
YBX1P67809 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
YBX1P67809 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
YBX1P67809 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.41□□□□□ -1.7
YBX1P67809 AC026523.2-201ENST00000625039 7739 ntBASIC4.41□□□□□ -1.7
YBX1P67809 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
YBX1P67809 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.41□□□□□ -1.7
YBX1P67809 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.7
YBX1P67809 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
YBX1P67809 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
YBX1P67809 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.4□□□□□ -1.7
YBX1P67809 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
YBX1P67809 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
YBX1P67809 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
YBX1P67809 Y_RNA.350-201ENST00000365409 98 ntBASIC4.4□□□□□ -1.71
YBX1P67809 HDGFP1-201ENST00000405943 252 ntBASIC4.4□□□□□ -1.71
YBX1P67809 MIR1302-6-201ENST00000408466 90 ntBASIC4.4□□□□□ -1.71
YBX1P67809 RNA5SP146-201ENST00000410743 123 ntBASIC4.4□□□□□ -1.71
YBX1P67809 RPS23P10-201ENST00000416185 486 ntBASIC4.4□□□□□ -1.71
YBX1P67809 PGBD4P6-201ENST00000421501 610 ntBASIC4.4□□□□□ -1.71
YBX1P67809 RPL7AP25-201ENST00000423357 805 ntBASIC4.4□□□□□ -1.71
YBX1P67809 RPL18P10-201ENST00000425606 538 ntBASIC4.4□□□□□ -1.71
YBX1P67809 RPL23AP1-201ENST00000428990 471 ntBASIC4.4□□□□□ -1.71
YBX1P67809 NOTCH2P1-201ENST00000443481 624 ntBASIC4.4□□□□□ -1.71
YBX1P67809 HSFY6P-201ENST00000445573 403 ntBASIC4.4□□□□□ -1.71
YBX1P67809 GAPDHP27-201ENST00000447427 1020 ntBASIC4.4□□□□□ -1.71
YBX1P67809 AP000926.1-201ENST00000479573 241 ntBASIC4.4□□□□□ -1.71
YBX1P67809 AC108860.1-201ENST00000484521 383 ntBASIC4.4□□□□□ -1.71
YBX1P67809 AC092436.3-201ENST00000511788 257 ntBASIC4.4□□□□□ -1.71
YBX1P67809 AC005798.1-201ENST00000513715 387 ntBASIC4.4□□□□□ -1.71
YBX1P67809 RNU6-390P-201ENST00000516259 103 ntBASIC4.4□□□□□ -1.71
YBX1P67809 IGKV2D-36-201ENST00000518643 226 ntBASIC4.4□□□□□ -1.71
YBX1P67809 IGHV3-76-201ENST00000522465 295 ntBASIC4.4□□□□□ -1.71
YBX1P67809 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.4□□□□□ -1.71
YBX1P67809 AC023157.2-201ENST00000540596 141 ntBASIC4.4□□□□□ -1.71
YBX1P67809 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 155.8 ms