Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 RN7SL271P-201ENST00000487601 295 ntBASIC4.5□□□□□ -1.69
HERVK_113P62684 RPL31P61-201ENST00000496160 376 ntBASIC4.5□□□□□ -1.69
HERVK_113P62684 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC4.5□□□□□ -1.69
HERVK_113P62684 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC4.5□□□□□ -1.69
HERVK_113P62684 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC4.5□□□□□ -1.69
HERVK_113P62684 MTND4P7-201ENST00000523876 130 ntBASIC4.5□□□□□ -1.69
HERVK_113P62684 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HERVK_113P62684 DEFB109D-201ENST00000529497 240 ntBASIC4.5□□□□□ -1.69
HERVK_113P62684 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.5□□□□□ -1.69
HERVK_113P62684 MDM2-233ENST00000545204 398 ntTSL 5 BASIC4.5□□□□□ -1.69
HERVK_113P62684 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.5□□□□□ -1.69
HERVK_113P62684 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.5□□□□□ -1.69
HERVK_113P62684 AC022968.1-201ENST00000567372 442 ntBASIC4.5□□□□□ -1.69
HERVK_113P62684 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.5□□□□□ -1.69
HERVK_113P62684 AC006254.3-201ENST00000603353 884 ntBASIC4.5□□□□□ -1.69
HERVK_113P62684 AC012443.1-201ENST00000605605 231 ntBASIC4.5□□□□□ -1.69
HERVK_113P62684 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC4.5□□□□□ -1.69
HERVK_113P62684 AL133216.2-202ENST00000634512 349 ntBASIC4.5□□□□□ -1.69
HERVK_113P62684 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HERVK_113P62684 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.5□□□□□ -1.69
HERVK_113P62684 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
HERVK_113P62684 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
HERVK_113P62684 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
HERVK_113P62684 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HERVK_113P62684 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.49□□□□□ -1.69
HERVK_113P62684 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HERVK_113P62684 RNU6-525P-201ENST00000363685 104 ntBASIC4.49□□□□□ -1.69
HERVK_113P62684 MIR34B-201ENST00000385076 84 ntBASIC4.49□□□□□ -1.69
HERVK_113P62684 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
HERVK_113P62684 RNU4-65P-201ENST00000410473 140 ntBASIC4.49□□□□□ -1.69
HERVK_113P62684 BX323014.1-201ENST00000412876 237 ntBASIC4.49□□□□□ -1.69
HERVK_113P62684 CKS1BP5-201ENST00000434172 273 ntBASIC4.49□□□□□ -1.69
HERVK_113P62684 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC4.49□□□□□ -1.69
HERVK_113P62684 AC236972.2-201ENST00000434979 310 ntBASIC4.49□□□□□ -1.69
HERVK_113P62684 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC4.49□□□□□ -1.69
HERVK_113P62684 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HERVK_113P62684 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.49□□□□□ -1.69
HERVK_113P62684 RNU7-180P-201ENST00000459240 63 ntBASIC4.49□□□□□ -1.69
HERVK_113P62684 HMGN1P10-201ENST00000474557 553 ntBASIC4.49□□□□□ -1.69
HERVK_113P62684 RPL23AP11-201ENST00000475260 469 ntBASIC4.49□□□□□ -1.69
HERVK_113P62684 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.49□□□□□ -1.69
HERVK_113P62684 AC083904.1-201ENST00000487828 231 ntBASIC4.49□□□□□ -1.69
HERVK_113P62684 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.49□□□□□ -1.69
HERVK_113P62684 HMGN1P11-201ENST00000508668 303 ntBASIC4.49□□□□□ -1.69
HERVK_113P62684 AC104806.1-201ENST00000508720 308 ntBASIC4.49□□□□□ -1.69
HERVK_113P62684 AC026801.2-201ENST00000515352 425 ntBASIC4.49□□□□□ -1.69
HERVK_113P62684 Y_RNA.691-201ENST00000516611 103 ntBASIC4.49□□□□□ -1.69
HERVK_113P62684 RNU6-273P-201ENST00000516937 96 ntBASIC4.49□□□□□ -1.69
HERVK_113P62684 RNU6-1092P-201ENST00000516955 87 ntBASIC4.49□□□□□ -1.69
HERVK_113P62684 IGKV2-38-201ENST00000517443 247 ntBASIC4.49□□□□□ -1.69
HERVK_113P62684 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.49□□□□□ -1.69
HERVK_113P62684 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.49□□□□□ -1.69
HERVK_113P62684 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.49□□□□□ -1.69
HERVK_113P62684 AP003072.1-201ENST00000531740 145 ntBASIC4.49□□□□□ -1.69
HERVK_113P62684 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC4.49□□□□□ -1.69
HERVK_113P62684 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.49□□□□□ -1.69
HERVK_113P62684 AC010680.4-201ENST00000605334 543 ntBASIC4.49□□□□□ -1.69
HERVK_113P62684 AC096577.2-201ENST00000611455 153 ntBASIC4.49□□□□□ -1.69
HERVK_113P62684 AL390240.1-201ENST00000612950 384 ntBASIC4.49□□□□□ -1.69
HERVK_113P62684 U73479.1-201ENST00000618062 168 ntBASIC4.49□□□□□ -1.69
HERVK_113P62684 AL589994.2-201ENST00000621124 579 ntBASIC4.49□□□□□ -1.69
HERVK_113P62684 AC091953.5-201ENST00000622919 233 ntBASIC4.49□□□□□ -1.69
HERVK_113P62684 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HERVK_113P62684 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HERVK_113P62684 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HERVK_113P62684 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.49□□□□□ -1.69
HERVK_113P62684 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.48□□□□□ -1.69
HERVK_113P62684 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.48□□□□□ -1.69
HERVK_113P62684 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HERVK_113P62684 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
HERVK_113P62684 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.48□□□□□ -1.69
HERVK_113P62684 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HERVK_113P62684 AL139276.1-201ENST00000311910 1001 ntBASIC4.48□□□□□ -1.69
HERVK_113P62684 Y_RNA.162-201ENST00000363683 102 ntBASIC4.48□□□□□ -1.69
HERVK_113P62684 SNORD115-7-201ENST00000365306 82 ntBASIC4.48□□□□□ -1.69
HERVK_113P62684 RNU6-61P-201ENST00000365528 109 ntBASIC4.48□□□□□ -1.69
HERVK_113P62684 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HERVK_113P62684 Y_RNA.474-201ENST00000384341 102 ntBASIC4.48□□□□□ -1.69
HERVK_113P62684 Y_RNA.576-201ENST00000384781 102 ntBASIC4.48□□□□□ -1.69
HERVK_113P62684 MIR183-201ENST00000384958 110 ntBASIC4.48□□□□□ -1.69
HERVK_113P62684 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
HERVK_113P62684 MIR1251-201ENST00000408552 70 ntBASIC4.48□□□□□ -1.69
HERVK_113P62684 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.48□□□□□ -1.69
HERVK_113P62684 RPL7AP73-201ENST00000413490 353 ntBASIC4.48□□□□□ -1.69
HERVK_113P62684 RPS29P4-201ENST00000414733 161 ntBASIC4.48□□□□□ -1.69
HERVK_113P62684 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.48□□□□□ -1.69
HERVK_113P62684 RPL7L1P10-201ENST00000427790 463 ntBASIC4.48□□□□□ -1.69
HERVK_113P62684 SAR1AP4-201ENST00000429225 591 ntBASIC4.48□□□□□ -1.69
HERVK_113P62684 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC4.48□□□□□ -1.69
HERVK_113P62684 AC083863.1-201ENST00000438811 231 ntBASIC4.48□□□□□ -1.69
HERVK_113P62684 HMGB3P11-201ENST00000440127 604 ntBASIC4.48□□□□□ -1.69
HERVK_113P62684 PRDX3P3-201ENST00000447765 522 ntBASIC4.48□□□□□ -1.69
HERVK_113P62684 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC4.48□□□□□ -1.69
HERVK_113P62684 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC4.48□□□□□ -1.69
HERVK_113P62684 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC4.48□□□□□ -1.69
HERVK_113P62684 AC008481.1-201ENST00000463278 396 ntBASIC4.48□□□□□ -1.69
HERVK_113P62684 RPL23AP55-201ENST00000498163 452 ntBASIC4.48□□□□□ -1.69
HERVK_113P62684 FAM206BP-201ENST00000510179 541 ntBASIC4.48□□□□□ -1.69
HERVK_113P62684 AC104619.4-201ENST00000510773 249 ntBASIC4.48□□□□□ -1.69
HERVK_113P62684 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms