Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 MIR4293-201ENST00000584305 78 ntBASIC4.56□□□□□ -1.68
NCKAP1LP55160 AC012443.1-201ENST00000605605 231 ntBASIC4.56□□□□□ -1.68
NCKAP1LP55160 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.56□□□□□ -1.68
NCKAP1LP55160 HMGB1P24-202ENST00000615653 685 ntBASIC4.56□□□□□ -1.68
NCKAP1LP55160 AL355365.1-201ENST00000616480 294 ntBASIC4.56□□□□□ -1.68
NCKAP1LP55160 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
NCKAP1LP55160 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NCKAP1LP55160 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
NCKAP1LP55160 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.55□□□□□ -1.68
NCKAP1LP55160 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
NCKAP1LP55160 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.55□□□□□ -1.68
NCKAP1LP55160 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.55□□□□□ -1.68
NCKAP1LP55160 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
NCKAP1LP55160 SNORD82-201ENST00000365530 70 ntBASIC4.55□□□□□ -1.68
NCKAP1LP55160 SNORA70C-201ENST00000384538 135 ntBASIC4.55□□□□□ -1.68
NCKAP1LP55160 RNU6-1127P-201ENST00000384580 107 ntBASIC4.55□□□□□ -1.68
NCKAP1LP55160 RNU6-550P-201ENST00000391057 101 ntBASIC4.55□□□□□ -1.68
NCKAP1LP55160 Y_RNA.645-201ENST00000391229 102 ntBASIC4.55□□□□□ -1.68
NCKAP1LP55160 RNU2-21P-201ENST00000410368 188 ntBASIC4.55□□□□□ -1.68
NCKAP1LP55160 RNU6-387P-201ENST00000411331 105 ntBASIC4.55□□□□□ -1.68
NCKAP1LP55160 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.55□□□□□ -1.68
NCKAP1LP55160 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.55□□□□□ -1.68
NCKAP1LP55160 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC4.55□□□□□ -1.68
NCKAP1LP55160 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.55□□□□□ -1.68
NCKAP1LP55160 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.55□□□□□ -1.68
NCKAP1LP55160 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
NCKAP1LP55160 AC110794.1-201ENST00000505816 425 ntBASIC4.55□□□□□ -1.68
NCKAP1LP55160 AC104136.1-201ENST00000512969 394 ntBASIC4.55□□□□□ -1.68
NCKAP1LP55160 RNU6-685P-201ENST00000517088 95 ntBASIC4.55□□□□□ -1.68
NCKAP1LP55160 FAM60DP-201ENST00000524174 632 ntBASIC4.55□□□□□ -1.68
NCKAP1LP55160 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.55□□□□□ -1.68
NCKAP1LP55160 AC104695.3-201ENST00000604052 296 ntBASIC4.55□□□□□ -1.68
NCKAP1LP55160 AC004696.1-201ENST00000614345 607 ntBASIC4.55□□□□□ -1.68
NCKAP1LP55160 MIR6864-201ENST00000617935 70 ntBASIC4.55□□□□□ -1.68
NCKAP1LP55160 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.55□□□□□ -1.68
NCKAP1LP55160 AC010378.1-201ENST00000619270 362 ntBASIC4.55□□□□□ -1.68
NCKAP1LP55160 AC008785.1-201ENST00000624475 456 ntBASIC4.55□□□□□ -1.68
NCKAP1LP55160 AL136313.1-201ENST00000624804 202 ntBASIC4.55□□□□□ -1.68
NCKAP1LP55160 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC4.55□□□□□ -1.68
NCKAP1LP55160 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.55□□□□□ -1.68
NCKAP1LP55160 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
NCKAP1LP55160 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
NCKAP1LP55160 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
NCKAP1LP55160 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.55□□□□□ -1.68
NCKAP1LP55160 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
NCKAP1LP55160 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.55□□□□□ -1.68
NCKAP1LP55160 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
NCKAP1LP55160 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
NCKAP1LP55160 AL122126.1-201ENST00000546905 1318 ntBASIC4.54□□□□□ -1.68
NCKAP1LP55160 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.54□□□□□ -1.68
NCKAP1LP55160 RNA5SP391-201ENST00000363456 119 ntBASIC4.54□□□□□ -1.68
NCKAP1LP55160 RNU1-115P-201ENST00000365329 160 ntBASIC4.54□□□□□ -1.68
NCKAP1LP55160 RNU11-4P-201ENST00000391149 133 ntBASIC4.54□□□□□ -1.68
NCKAP1LP55160 AL445189.1-201ENST00000405722 338 ntBASIC4.54□□□□□ -1.68
NCKAP1LP55160 MIR548I3-201ENST00000408378 149 ntBASIC4.54□□□□□ -1.68
NCKAP1LP55160 MIR548I1-201ENST00000408810 149 ntBASIC4.54□□□□□ -1.68
NCKAP1LP55160 EIF4A1P3-201ENST00000411521 244 ntBASIC4.54□□□□□ -1.68
NCKAP1LP55160 AL353597.2-202ENST00000434901 373 ntBASIC4.54□□□□□ -1.68
NCKAP1LP55160 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC4.54□□□□□ -1.68
NCKAP1LP55160 AC005094.1-201ENST00000440420 368 ntBASIC4.54□□□□□ -1.68
NCKAP1LP55160 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.54□□□□□ -1.68
NCKAP1LP55160 RPS15AP27-201ENST00000449183 343 ntBASIC4.54□□□□□ -1.68
NCKAP1LP55160 AL162388.1-201ENST00000450912 352 ntBASIC4.54□□□□□ -1.68
NCKAP1LP55160 EIF4A1P11-201ENST00000451239 222 ntBASIC4.54□□□□□ -1.68
NCKAP1LP55160 snoU13.7-201ENST00000459220 104 ntBASIC4.54□□□□□ -1.68
NCKAP1LP55160 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.54□□□□□ -1.68
NCKAP1LP55160 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.54□□□□□ -1.68
NCKAP1LP55160 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.54□□□□□ -1.68
NCKAP1LP55160 AC104806.1-201ENST00000508720 308 ntBASIC4.54□□□□□ -1.68
NCKAP1LP55160 AC116337.1-201ENST00000509680 687 ntBASIC4.54□□□□□ -1.68
NCKAP1LP55160 HIGD1AP13-201ENST00000509878 289 ntBASIC4.54□□□□□ -1.68
NCKAP1LP55160 AC026782.1-201ENST00000512952 449 ntBASIC4.54□□□□□ -1.68
NCKAP1LP55160 RNA5SP154-201ENST00000516193 111 ntBASIC4.54□□□□□ -1.68
NCKAP1LP55160 RNU6-64P-201ENST00000517119 105 ntBASIC4.54□□□□□ -1.68
NCKAP1LP55160 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.54□□□□□ -1.68
NCKAP1LP55160 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.54□□□□□ -1.68
NCKAP1LP55160 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC4.54□□□□□ -1.68
NCKAP1LP55160 AC090115.3-201ENST00000553218 849 ntBASIC4.54□□□□□ -1.68
NCKAP1LP55160 AL121576.1-201ENST00000556055 276 ntBASIC4.54□□□□□ -1.68
NCKAP1LP55160 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.54□□□□□ -1.68
NCKAP1LP55160 AL591034.3-201ENST00000605511 685 ntBASIC4.54□□□□□ -1.68
NCKAP1LP55160 AC006157.1-201ENST00000611750 366 ntBASIC4.54□□□□□ -1.68
NCKAP1LP55160 AC011890.2-201ENST00000613393 294 ntBASIC4.54□□□□□ -1.68
NCKAP1LP55160 AL590099.1-201ENST00000615276 138 ntBASIC4.54□□□□□ -1.68
NCKAP1LP55160 AC123768.4-201ENST00000616244 701 ntBASIC4.54□□□□□ -1.68
NCKAP1LP55160 ZNF734P-201ENST00000419494 1534 ntBASIC4.54□□□□□ -1.68
NCKAP1LP55160 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.54□□□□□ -1.68
NCKAP1LP55160 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
NCKAP1LP55160 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
NCKAP1LP55160 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
NCKAP1LP55160 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.54□□□□□ -1.68
NCKAP1LP55160 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
NCKAP1LP55160 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
NCKAP1LP55160 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
NCKAP1LP55160 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
NCKAP1LP55160 AC093535.2-201ENST00000624769 2326 ntBASIC4.54□□□□□ -1.68
NCKAP1LP55160 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
NCKAP1LP55160 DDX18P3-201ENST00000404856 2007 ntBASIC4.53□□□□□ -1.68
NCKAP1LP55160 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.53□□□□□ -1.68
NCKAP1LP55160 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms