Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
VCPP55072 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
VCPP55072 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
VCPP55072 RNU6-859P-201ENST00000362728 107 ntBASIC2.96□□□□□ -1.94
VCPP55072 RNU1-109P-201ENST00000383960 147 ntBASIC2.96□□□□□ -1.94
VCPP55072 Y_RNA.548-201ENST00000384656 105 ntBASIC2.96□□□□□ -1.94
VCPP55072 MTND4P13-201ENST00000402078 1023 ntBASIC2.96□□□□□ -1.94
VCPP55072 SNORD88.1-201ENST00000408684 91 ntBASIC2.96□□□□□ -1.94
VCPP55072 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC2.96□□□□□ -1.94
VCPP55072 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.96□□□□□ -1.94
VCPP55072 RPS20P5-201ENST00000434808 360 ntBASIC2.96□□□□□ -1.94
VCPP55072 AL121871.1-201ENST00000443413 436 ntBASIC2.96□□□□□ -1.94
VCPP55072 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.96□□□□□ -1.94
VCPP55072 AP000936.2-201ENST00000447151 681 ntBASIC2.96□□□□□ -1.94
VCPP55072 AL592447.1-201ENST00000447592 540 ntBASIC2.96□□□□□ -1.94
VCPP55072 MTCO1P27-201ENST00000448269 226 ntBASIC2.96□□□□□ -1.94
VCPP55072 PAXBP1P1-201ENST00000449315 447 ntBASIC2.96□□□□□ -1.94
VCPP55072 AL109741.2-201ENST00000455561 343 ntBASIC2.96□□□□□ -1.94
VCPP55072 HMGB1P36-201ENST00000487709 576 ntBASIC2.96□□□□□ -1.94
VCPP55072 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.96□□□□□ -1.94
VCPP55072 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
VCPP55072 SEM1P1-201ENST00000506694 209 ntBASIC2.96□□□□□ -1.94
VCPP55072 HSPE1P23-201ENST00000509838 286 ntBASIC2.96□□□□□ -1.94
VCPP55072 AL359273.1-201ENST00000510918 627 ntBASIC2.96□□□□□ -1.94
VCPP55072 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC2.96□□□□□ -1.94
VCPP55072 SNORA3.4-201ENST00000515969 96 ntBASIC2.96□□□□□ -1.94
VCPP55072 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.96□□□□□ -1.94
VCPP55072 AP001646.1-201ENST00000527936 915 ntBASIC2.96□□□□□ -1.94
VCPP55072 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.96□□□□□ -1.94
VCPP55072 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC2.96□□□□□ -1.94
VCPP55072 AC008739.2-201ENST00000597006 317 ntBASIC2.96□□□□□ -1.94
VCPP55072 MIR6817-201ENST00000615588 66 ntBASIC2.96□□□□□ -1.94
VCPP55072 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
VCPP55072 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.96□□□□□ -1.94
VCPP55072 AP000526.1-201ENST00000603308 1388 ntBASIC2.96□□□□□ -1.94
VCPP55072 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
VCPP55072 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.95□□□□□ -1.94
VCPP55072 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.95□□□□□ -1.94
VCPP55072 DEFB108F-201ENST00000344638 222 ntBASIC2.95□□□□□ -1.94
VCPP55072 RNA5SP68-201ENST00000363885 119 ntBASIC2.95□□□□□ -1.94
VCPP55072 RNU6-1200P-201ENST00000384162 107 ntBASIC2.95□□□□□ -1.94
VCPP55072 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
VCPP55072 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
VCPP55072 MIR320C1-201ENST00000408566 88 ntBASIC2.95□□□□□ -1.94
VCPP55072 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.95□□□□□ -1.94
VCPP55072 AL022400.1-201ENST00000423946 935 ntBASIC2.95□□□□□ -1.94
VCPP55072 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC2.95□□□□□ -1.94
VCPP55072 AL354941.1-201ENST00000438600 464 ntBASIC2.95□□□□□ -1.94
VCPP55072 AL117351.1-201ENST00000438864 766 ntBASIC2.95□□□□□ -1.94
VCPP55072 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.95□□□□□ -1.94
VCPP55072 AC104058.1-201ENST00000448028 297 ntBASIC2.95□□□□□ -1.94
VCPP55072 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.95□□□□□ -1.94
VCPP55072 RPL30P9-201ENST00000465586 330 ntBASIC2.95□□□□□ -1.94
VCPP55072 AL049714.1-201ENST00000466686 347 ntBASIC2.95□□□□□ -1.94
VCPP55072 AC108210.2-201ENST00000503681 201 ntBASIC2.95□□□□□ -1.94
VCPP55072 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
VCPP55072 AC098799.2-201ENST00000509466 868 ntBASIC2.95□□□□□ -1.94
VCPP55072 DEFB108D-201ENST00000527787 222 ntBASIC2.95□□□□□ -1.94
VCPP55072 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.95□□□□□ -1.94
VCPP55072 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.95□□□□□ -1.94
VCPP55072 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.95□□□□□ -1.94
VCPP55072 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.95□□□□□ -1.94
VCPP55072 AC011451.2-201ENST00000604303 598 ntBASIC2.95□□□□□ -1.94
VCPP55072 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.95□□□□□ -1.94
VCPP55072 AC024560.3-201ENST00000608482 349 ntBASIC2.95□□□□□ -1.94
VCPP55072 AC087683.2-201ENST00000611384 326 ntBASIC2.95□□□□□ -1.94
VCPP55072 AC002550.2-201ENST00000621246 394 ntBASIC2.95□□□□□ -1.94
VCPP55072 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.95□□□□□ -1.94
VCPP55072 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.95□□□□□ -1.94
VCPP55072 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
VCPP55072 AC104454.1-201ENST00000421341 1401 ntBASIC2.94□□□□□ -1.94
VCPP55072 FRG1BP-201ENST00000278882 761 ntBASIC2.94□□□□□ -1.94
VCPP55072 RNU6-359P-201ENST00000365466 108 ntBASIC2.94□□□□□ -1.94
VCPP55072 RNU6-744P-201ENST00000365557 107 ntBASIC2.94□□□□□ -1.94
VCPP55072 RNU6-1316P-201ENST00000384242 108 ntBASIC2.94□□□□□ -1.94
VCPP55072 RNU6-1207P-201ENST00000384343 107 ntBASIC2.94□□□□□ -1.94
VCPP55072 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
VCPP55072 AC119751.3-201ENST00000399720 670 ntBASIC2.94□□□□□ -1.94
VCPP55072 RNU2-43P-201ENST00000410306 190 ntBASIC2.94□□□□□ -1.94
VCPP55072 RPL7P37-201ENST00000425095 738 ntBASIC2.94□□□□□ -1.94
VCPP55072 ISCA1P6-201ENST00000427740 390 ntBASIC2.94□□□□□ -1.94
VCPP55072 AL591806.2-201ENST00000433122 173 ntBASIC2.94□□□□□ -1.94
VCPP55072 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.94□□□□□ -1.94
VCPP55072 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.94□□□□□ -1.94
VCPP55072 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.94□□□□□ -1.94
VCPP55072 AC112653.1-201ENST00000443851 386 ntBASIC2.94□□□□□ -1.94
VCPP55072 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.94□□□□□ -1.94
VCPP55072 RPL23AP20-201ENST00000447965 421 ntBASIC2.94□□□□□ -1.94
VCPP55072 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.94□□□□□ -1.94
VCPP55072 SNORD121B-201ENST00000458838 81 ntBASIC2.94□□□□□ -1.94
VCPP55072 RPL23AP11-201ENST00000475260 469 ntBASIC2.94□□□□□ -1.94
VCPP55072 AP001025.2-201ENST00000490908 477 ntBASIC2.94□□□□□ -1.94
VCPP55072 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.94□□□□□ -1.94
VCPP55072 RNA5SP148-201ENST00000516527 94 ntBASIC2.94□□□□□ -1.94
VCPP55072 RNU6-528P-201ENST00000516926 100 ntBASIC2.94□□□□□ -1.94
VCPP55072 RNU6-548P-201ENST00000517083 115 ntBASIC2.94□□□□□ -1.94
VCPP55072 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC2.94□□□□□ -1.94
VCPP55072 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.94□□□□□ -1.94
VCPP55072 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.94□□□□□ -1.94
VCPP55072 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 130.1 ms