Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CLCNKAP51800 MIR208A-201ENST00000362287 71 ntBASIC3.36□□□□□ -1.87
CLCNKAP51800 RNU6-181P-201ENST00000363225 107 ntBASIC3.36□□□□□ -1.87
CLCNKAP51800 RNU6-754P-201ENST00000391166 107 ntBASIC3.36□□□□□ -1.87
CLCNKAP51800 RNU4-55P-201ENST00000410731 137 ntBASIC3.36□□□□□ -1.87
CLCNKAP51800 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.36□□□□□ -1.87
CLCNKAP51800 AL158156.1-201ENST00000422509 473 ntBASIC3.36□□□□□ -1.87
CLCNKAP51800 DUTP6-201ENST00000425573 462 ntBASIC3.36□□□□□ -1.87
CLCNKAP51800 MTCO2P11-201ENST00000431069 680 ntBASIC3.36□□□□□ -1.87
CLCNKAP51800 FCF1P1-201ENST00000432690 571 ntBASIC3.36□□□□□ -1.87
CLCNKAP51800 AC004866.2-201ENST00000438285 481 ntBASIC3.36□□□□□ -1.87
CLCNKAP51800 HIGD1AP11-201ENST00000438361 280 ntBASIC3.36□□□□□ -1.87
CLCNKAP51800 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.36□□□□□ -1.87
CLCNKAP51800 MTCO2P29-201ENST00000465212 189 ntBASIC3.36□□□□□ -1.87
CLCNKAP51800 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.36□□□□□ -1.87
CLCNKAP51800 RPL21P13-201ENST00000488305 481 ntBASIC3.36□□□□□ -1.87
CLCNKAP51800 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.36□□□□□ -1.87
CLCNKAP51800 AC074250.1-201ENST00000511117 192 ntBASIC3.36□□□□□ -1.87
CLCNKAP51800 RNU6-314P-201ENST00000516574 104 ntBASIC3.36□□□□□ -1.87
CLCNKAP51800 RNU6-445P-201ENST00000516949 107 ntBASIC3.36□□□□□ -1.87
CLCNKAP51800 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.36□□□□□ -1.87
CLCNKAP51800 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC3.36□□□□□ -1.87
CLCNKAP51800 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.36□□□□□ -1.87
CLCNKAP51800 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.36□□□□□ -1.87
CLCNKAP51800 OR5G4P-201ENST00000525251 760 ntBASIC3.36□□□□□ -1.87
CLCNKAP51800 FAM92A1P1-201ENST00000528023 890 ntBASIC3.36□□□□□ -1.87
CLCNKAP51800 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.36□□□□□ -1.87
CLCNKAP51800 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.36□□□□□ -1.87
CLCNKAP51800 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.36□□□□□ -1.87
CLCNKAP51800 AC007684.1-201ENST00000609671 477 ntBASIC3.36□□□□□ -1.87
CLCNKAP51800 AC103710.2-201ENST00000609912 942 ntBASIC3.36□□□□□ -1.87
CLCNKAP51800 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.36□□□□□ -1.87
CLCNKAP51800 AC092794.1-201ENST00000612734 582 ntBASIC3.36□□□□□ -1.87
CLCNKAP51800 AL110115.1-201ENST00000614396 364 ntBASIC3.36□□□□□ -1.87
CLCNKAP51800 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.36□□□□□ -1.87
CLCNKAP51800 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.36□□□□□ -1.87
CLCNKAP51800 MIR6863-201ENST00000636112 90 ntBASIC3.36□□□□□ -1.87
CLCNKAP51800 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CLCNKAP51800 ZNF826P-207ENST00000622273 1910 ntBASIC3.36□□□□□ -1.87
CLCNKAP51800 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CLCNKAP51800 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CLCNKAP51800 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.36□□□□□ -1.87
CLCNKAP51800 AC005832.2-201ENST00000538921 1430 ntBASIC3.36□□□□□ -1.87
CLCNKAP51800 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
CLCNKAP51800 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.35□□□□□ -1.87
CLCNKAP51800 MAPK10-362ENST00000641864 4484 ntBASIC3.35□□□□□ -1.87
CLCNKAP51800 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CLCNKAP51800 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.35□□□□□ -1.87
CLCNKAP51800 RNU6-169P-201ENST00000365336 107 ntBASIC3.35□□□□□ -1.87
CLCNKAP51800 SNORA70.4-201ENST00000365509 134 ntBASIC3.35□□□□□ -1.87
CLCNKAP51800 Y_RNA.554-201ENST00000384672 102 ntBASIC3.35□□□□□ -1.87
CLCNKAP51800 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
CLCNKAP51800 RNU6-278P-201ENST00000390945 109 ntBASIC3.35□□□□□ -1.87
CLCNKAP51800 RPL17P50-201ENST00000396131 546 ntBASIC3.35□□□□□ -1.87
CLCNKAP51800 AL109755.1-201ENST00000401791 649 ntBASIC3.35□□□□□ -1.87
CLCNKAP51800 RNA5SP107-201ENST00000411358 122 ntBASIC3.35□□□□□ -1.87
CLCNKAP51800 BX323014.1-201ENST00000412876 237 ntBASIC3.35□□□□□ -1.87
CLCNKAP51800 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.35□□□□□ -1.87
CLCNKAP51800 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC3.35□□□□□ -1.87
CLCNKAP51800 AC090774.1-201ENST00000435925 246 ntBASIC3.35□□□□□ -1.87
CLCNKAP51800 RPL35AP22-201ENST00000436855 335 ntBASIC3.35□□□□□ -1.87
CLCNKAP51800 AC005094.1-201ENST00000440420 368 ntBASIC3.35□□□□□ -1.87
CLCNKAP51800 AL136380.1-201ENST00000447970 162 ntBASIC3.35□□□□□ -1.87
CLCNKAP51800 AL162389.1-201ENST00000449233 177 ntBASIC3.35□□□□□ -1.87
CLCNKAP51800 RN7SL601P-201ENST00000471221 293 ntBASIC3.35□□□□□ -1.87
CLCNKAP51800 HMGN2P13-201ENST00000476476 274 ntBASIC3.35□□□□□ -1.87
CLCNKAP51800 HMGB1P29-201ENST00000505659 499 ntBASIC3.35□□□□□ -1.87
CLCNKAP51800 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.35□□□□□ -1.87
CLCNKAP51800 SNORA70.19-201ENST00000516717 90 ntBASIC3.35□□□□□ -1.87
CLCNKAP51800 MTND4LP26-201ENST00000518144 282 ntBASIC3.35□□□□□ -1.87
CLCNKAP51800 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.35□□□□□ -1.87
CLCNKAP51800 NDUFB9P3-201ENST00000521269 501 ntBASIC3.35□□□□□ -1.87
CLCNKAP51800 AC093331.1-201ENST00000521474 169 ntBASIC3.35□□□□□ -1.87
CLCNKAP51800 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.35□□□□□ -1.87
CLCNKAP51800 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.35□□□□□ -1.87
CLCNKAP51800 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC3.35□□□□□ -1.87
CLCNKAP51800 AC011611.1-201ENST00000552179 197 ntBASIC3.35□□□□□ -1.87
CLCNKAP51800 AC136619.2-201ENST00000563361 631 ntBASIC3.35□□□□□ -1.87
CLCNKAP51800 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CLCNKAP51800 MIR4738-201ENST00000579134 87 ntBASIC3.35□□□□□ -1.87
CLCNKAP51800 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.35□□□□□ -1.87
CLCNKAP51800 AC067852.3-201ENST00000589177 561 ntBASIC3.35□□□□□ -1.87
CLCNKAP51800 AC007179.3-201ENST00000604976 235 ntBASIC3.35□□□□□ -1.87
CLCNKAP51800 AC008277.2-201ENST00000605196 797 ntBASIC3.35□□□□□ -1.87
CLCNKAP51800 AC092954.2-201ENST00000609103 430 ntBASIC3.35□□□□□ -1.87
CLCNKAP51800 AC093838.1-201ENST00000613014 469 ntBASIC3.35□□□□□ -1.87
CLCNKAP51800 TUG1_2.1-201ENST00000614234 87 ntBASIC3.35□□□□□ -1.87
CLCNKAP51800 AL355810.1-201ENST00000614629 552 ntBASIC3.35□□□□□ -1.87
CLCNKAP51800 AC068831.7-201ENST00000616954 363 ntBASIC3.35□□□□□ -1.87
CLCNKAP51800 AL603758.1-201ENST00000618654 241 ntBASIC3.35□□□□□ -1.87
CLCNKAP51800 AC124864.2-201ENST00000624736 186 ntBASIC3.35□□□□□ -1.87
CLCNKAP51800 AL160394.1-201ENST00000624765 724 ntBASIC3.35□□□□□ -1.87
CLCNKAP51800 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.35□□□□□ -1.87
CLCNKAP51800 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
CLCNKAP51800 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CLCNKAP51800 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CLCNKAP51800 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CLCNKAP51800 AC092326.2-201ENST00000624772 1561 ntBASIC3.34□□□□□ -1.87
CLCNKAP51800 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.34□□□□□ -1.87
CLCNKAP51800 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms