Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 RSU1P2-202ENST00000437884 485 ntBASIC3.23□□□□□ -1.89
CLK1P49759 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.23□□□□□ -1.89
CLK1P49759 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.23□□□□□ -1.89
CLK1P49759 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.23□□□□□ -1.89
CLK1P49759 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.23□□□□□ -1.89
CLK1P49759 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.23□□□□□ -1.89
CLK1P49759 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.23□□□□□ -1.89
CLK1P49759 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.23□□□□□ -1.89
CLK1P49759 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.23□□□□□ -1.89
CLK1P49759 KLF3P2-201ENST00000465138 268 ntBASIC3.23□□□□□ -1.89
CLK1P49759 RN7SL594P-201ENST00000470590 287 ntBASIC3.23□□□□□ -1.89
CLK1P49759 RPL31P41-201ENST00000477967 372 ntBASIC3.23□□□□□ -1.89
CLK1P49759 AC126182.1-201ENST00000478134 357 ntBASIC3.23□□□□□ -1.89
CLK1P49759 ACTR3P3-201ENST00000480448 893 ntBASIC3.23□□□□□ -1.89
CLK1P49759 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
CLK1P49759 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.23□□□□□ -1.89
CLK1P49759 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.23□□□□□ -1.89
CLK1P49759 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.23□□□□□ -1.89
CLK1P49759 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
CLK1P49759 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.23□□□□□ -1.89
CLK1P49759 RNU1-95P-201ENST00000516357 160 ntBASIC3.23□□□□□ -1.89
CLK1P49759 RNU1-128P-201ENST00000516704 160 ntBASIC3.23□□□□□ -1.89
CLK1P49759 AC068657.1-201ENST00000520807 306 ntBASIC3.23□□□□□ -1.89
CLK1P49759 AP006245.1-201ENST00000522549 120 ntBASIC3.23□□□□□ -1.89
CLK1P49759 AP004247.1-201ENST00000531556 1289 ntBASIC3.23□□□□□ -1.89
CLK1P49759 AC013828.2-201ENST00000532487 235 ntBASIC3.23□□□□□ -1.89
CLK1P49759 TPRKBP2-201ENST00000565969 475 ntBASIC3.23□□□□□ -1.89
CLK1P49759 AC007823.1-201ENST00000569932 1566 ntBASIC3.23□□□□□ -1.89
CLK1P49759 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.23□□□□□ -1.89
CLK1P49759 MIR544B-201ENST00000582372 78 ntBASIC3.23□□□□□ -1.89
CLK1P49759 MIR4307-201ENST00000582802 84 ntBASIC3.23□□□□□ -1.89
CLK1P49759 AC006130.2-201ENST00000586202 326 ntBASIC3.23□□□□□ -1.89
CLK1P49759 AC006504.3-201ENST00000586818 523 ntBASIC3.23□□□□□ -1.89
CLK1P49759 AC006116.10-201ENST00000591836 581 ntBASIC3.23□□□□□ -1.89
CLK1P49759 AL355877.2-201ENST00000603670 358 ntBASIC3.23□□□□□ -1.89
CLK1P49759 AC112187.2-201ENST00000604345 283 ntBASIC3.23□□□□□ -1.89
CLK1P49759 AL390208.1-201ENST00000605885 644 ntBASIC3.23□□□□□ -1.89
CLK1P49759 AC098614.4-201ENST00000607601 462 ntBASIC3.23□□□□□ -1.89
CLK1P49759 AL161734.1-201ENST00000609720 557 ntBASIC3.23□□□□□ -1.89
CLK1P49759 U6atac.1-201ENST00000616025 117 ntBASIC3.23□□□□□ -1.89
CLK1P49759 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.23□□□□□ -1.89
CLK1P49759 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.23□□□□□ -1.89
CLK1P49759 AC002550.2-201ENST00000621246 394 ntBASIC3.23□□□□□ -1.89
CLK1P49759 AC243312.2-201ENST00000623340 601 ntBASIC3.23□□□□□ -1.89
CLK1P49759 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
CLK1P49759 CR848007.1-201ENST00000442354 1699 ntBASIC3.23□□□□□ -1.89
CLK1P49759 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.23□□□□□ -1.89
CLK1P49759 MTND5P26-201ENST00000426018 1752 ntBASIC3.23□□□□□ -1.89
CLK1P49759 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
CLK1P49759 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
CLK1P49759 RNU6-270P-201ENST00000364131 105 ntBASIC3.22□□□□□ -1.89
CLK1P49759 RNU6-343P-201ENST00000364709 104 ntBASIC3.22□□□□□ -1.89
CLK1P49759 RNU6-741P-201ENST00000383889 107 ntBASIC3.22□□□□□ -1.89
CLK1P49759 RNU6-769P-201ENST00000384407 104 ntBASIC3.22□□□□□ -1.89
CLK1P49759 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
CLK1P49759 Y_RNA.582-201ENST00000391023 95 ntBASIC3.22□□□□□ -1.89
CLK1P49759 RNU6-952P-201ENST00000391164 108 ntBASIC3.22□□□□□ -1.89
CLK1P49759 RN7SKP266-201ENST00000410232 287 ntBASIC3.22□□□□□ -1.89
CLK1P49759 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.22□□□□□ -1.89
CLK1P49759 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.22□□□□□ -1.89
CLK1P49759 AC099548.1-201ENST00000421443 426 ntBASIC3.22□□□□□ -1.89
CLK1P49759 AL139281.1-201ENST00000422120 335 ntBASIC3.22□□□□□ -1.89
CLK1P49759 PPP1R11P2-201ENST00000423543 382 ntBASIC3.22□□□□□ -1.89
CLK1P49759 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.22□□□□□ -1.89
CLK1P49759 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.22□□□□□ -1.89
CLK1P49759 AP000907.1-201ENST00000428428 510 ntBASIC3.22□□□□□ -1.89
CLK1P49759 AC018644.1-201ENST00000429934 551 ntBASIC3.22□□□□□ -1.89
CLK1P49759 RPL23AP22-201ENST00000437556 453 ntBASIC3.22□□□□□ -1.89
CLK1P49759 AC009296.1-201ENST00000443146 155 ntBASIC3.22□□□□□ -1.89
CLK1P49759 AC244505.5-201ENST00000443639 207 ntBASIC3.22□□□□□ -1.89
CLK1P49759 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CLK1P49759 AL357552.1-201ENST00000445254 415 ntBASIC3.22□□□□□ -1.89
CLK1P49759 AL133547.1-201ENST00000448546 220 ntBASIC3.22□□□□□ -1.89
CLK1P49759 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.22□□□□□ -1.89
CLK1P49759 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CLK1P49759 RN7SKP298-201ENST00000515950 94 ntBASIC3.22□□□□□ -1.89
CLK1P49759 SNORA70.19-201ENST00000516717 90 ntBASIC3.22□□□□□ -1.89
CLK1P49759 SNORA31.22-201ENST00000517204 135 ntBASIC3.22□□□□□ -1.89
CLK1P49759 RNU6-840P-201ENST00000517275 65 ntBASIC3.22□□□□□ -1.89
CLK1P49759 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.22□□□□□ -1.89
CLK1P49759 AP002453.2-201ENST00000533503 320 ntBASIC3.22□□□□□ -1.89
CLK1P49759 AC068587.4-201ENST00000533893 186 ntBASIC3.22□□□□□ -1.89
CLK1P49759 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.22□□□□□ -1.89
CLK1P49759 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.22□□□□□ -1.89
CLK1P49759 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC3.22□□□□□ -1.89
CLK1P49759 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.22□□□□□ -1.89
CLK1P49759 ZNF519P3-201ENST00000557158 1032 ntBASIC3.22□□□□□ -1.89
CLK1P49759 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC3.22□□□□□ -1.89
CLK1P49759 AC136619.2-201ENST00000563361 631 ntBASIC3.22□□□□□ -1.89
CLK1P49759 AC068135.2-201ENST00000569293 1028 ntBASIC3.22□□□□□ -1.89
CLK1P49759 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.22□□□□□ -1.89
CLK1P49759 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.22□□□□□ -1.89
CLK1P49759 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.22□□□□□ -1.89
CLK1P49759 AC007684.1-201ENST00000609671 477 ntBASIC3.22□□□□□ -1.89
CLK1P49759 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.22□□□□□ -1.89
CLK1P49759 AL357559.1-201ENST00000622228 274 ntBASIC3.22□□□□□ -1.89
CLK1P49759 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.22□□□□□ -1.89
CLK1P49759 AC093591.3-201ENST00000634516 308 ntBASIC3.22□□□□□ -1.89
CLK1P49759 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CLK1P49759 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms